RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 ZNF189O75820 626 aaPredicted RBP18.28■□□□□ 0.52
PNKP-213ENST00000599543 GNG11P61952 73 aa18.28■□□□□ 0.52
PNKP-213ENST00000599543 ACY1Q03154 408 aa18.28■□□□□ 0.52
PNKP-213ENST00000599543 KCNAB1Q14722 419 aa18.28■□□□□ 0.52
PNKP-213ENST00000599543 BCL7AQ4VC05 210 aa18.28■□□□□ 0.52
PNKP-213ENST00000599543 DUS1LQ6P1R4 473 aaKnown RBP18.28■□□□□ 0.52
PNKP-213ENST00000599543 KMT5CQ86Y97 462 aa18.28■□□□□ 0.52
PNKP-213ENST00000599543 OR13C4Q8NGS5 318 aa18.28■□□□□ 0.52
PNKP-213ENST00000599543 COG1Q8WTW3 980 aa18.28■□□□□ 0.52
PNKP-213ENST00000599543 NAT14Q8WUY8 206 aa18.28■□□□□ 0.52
PNKP-213ENST00000599543 ULK4Q96C45 1275 aa18.28■□□□□ 0.52
PNKP-213ENST00000599543 INSM2Q96T92 566 aaPredicted RBP18.28■□□□□ 0.52
PNKP-213ENST00000599543 MAP3K3Q99759 626 aa18.28■□□□□ 0.52
PNKP-213ENST00000599543 TBL1YQ9BQ87 522 aa18.28■□□□□ 0.52
PNKP-213ENST00000599543 HRASLS2Q9NWW9 162 aa18.28■□□□□ 0.52
PNKP-213ENST00000599543 PADI1Q9ULC6 663 aa18.28■□□□□ 0.52
PNKP-213ENST00000599543 CFAP99D6REC4 459 aa18.27■□□□□ 0.52
PNKP-213ENST00000599543 ZNF185O15231 689 aa18.27■□□□□ 0.52
PNKP-213ENST00000599543 TIAF1O95411 115 aa18.27■□□□□ 0.52
PNKP-213ENST00000599543 EBLN1P0CF75 366 aa18.27■□□□□ 0.52
PNKP-213ENST00000599543 ETS1P14921 441 aa18.27■□□□□ 0.52
PNKP-213ENST00000599543 FOLR1P15328 257 aa18.27■□□□□ 0.52
PNKP-213ENST00000599543 ITGALP20701 1170 aa18.27■□□□□ 0.52
PNKP-213ENST00000599543 HADHAP40939 763 aa18.27■□□□□ 0.52
PNKP-213ENST00000599543 HSD11B2P80365 405 aa18.27■□□□□ 0.52
PNKP-213ENST00000599543 TMPRSS15P98073 1019 aa18.27■□□□□ 0.52
PNKP-213ENST00000599543 ERV3-1Q14264 604 aa18.27■□□□□ 0.52
PNKP-213ENST00000599543 KRT33BQ14525 404 aa18.27■□□□□ 0.52
PNKP-213ENST00000599543 ARMC6Q6NXE6 501 aa18.27■□□□□ 0.52
PNKP-213ENST00000599543 BPHLQ86WA6 291 aaPredicted RBP18.27■□□□□ 0.52
PNKP-213ENST00000599543 SPDYE1Q8NFV5 336 aaPredicted RBP18.27■□□□□ 0.52
PNKP-213ENST00000599543 ZFPM2Q8WW38 1151 aa18.27■□□□□ 0.52
PNKP-213ENST00000599543 ABHD17AQ96GS6 310 aa18.27■□□□□ 0.52
PNKP-213ENST00000599543 LINC00615Q96LM1 132 aaPredicted RBP18.27■□□□□ 0.52
PNKP-213ENST00000599543 KIR3DX1Q9H7L2 352 aa18.27■□□□□ 0.52
PNKP-213ENST00000599543 LHX9Q9NQ69 397 aa18.27■□□□□ 0.52
PNKP-213ENST00000599543 SLC24A2Q9UI40 661 aa18.27■□□□□ 0.52
PNKP-213ENST00000599543 COLEC10Q9Y6Z7 277 aa18.27■□□□□ 0.52
PNKP-213ENST00000599543 KCNJ1P48048 391 aa18.26■□□□□ 0.51
PNKP-213ENST00000599543 PRLHRP49683 370 aa18.26■□□□□ 0.51
PNKP-213ENST00000599543 ZNF140P52738 457 aaPredicted RBP18.26■□□□□ 0.51
PNKP-213ENST00000599543 XIAPP98170 497 aa18.26■□□□□ 0.51
PNKP-213ENST00000599543 DNASE1L3Q13609 305 aa18.26■□□□□ 0.51
PNKP-213ENST00000599543 SPARCL1Q14515 664 aa18.26■□□□□ 0.51
PNKP-213ENST00000599543 SKIDA1Q1XH10 827 aa18.26■□□□□ 0.51
PNKP-213ENST00000599543 LACTB2Q53H82 288 aaPredicted RBP18.26■□□□□ 0.51
PNKP-213ENST00000599543 PWWP2BQ6NUJ5 590 aa18.26■□□□□ 0.51
PNKP-213ENST00000599543 SNX20Q7Z614 316 aa18.26■□□□□ 0.51
PNKP-213ENST00000599543 CFAP206Q8IYR0 622 aa18.26■□□□□ 0.51
PNKP-213ENST00000599543 NXPE1Q8N323 547 aa18.26■□□□□ 0.51
PNKP-213ENST00000599543 HEXDCQ8WVB3 486 aa18.26■□□□□ 0.51
PNKP-213ENST00000599543 RMDN2Q96LZ7 410 aa18.26■□□□□ 0.51
PNKP-213ENST00000599543 FCRL4Q96PJ5 515 aa18.26■□□□□ 0.51
PNKP-213ENST00000599543 OSBPL9Q96SU4 736 aa18.26■□□□□ 0.51
PNKP-213ENST00000599543 COPS8Q99627 209 aa18.26■□□□□ 0.51
PNKP-213ENST00000599543 AP1M1Q9BXS5 423 aa18.26■□□□□ 0.51
PNKP-213ENST00000599543 TWSG1Q9GZX9 223 aa18.26■□□□□ 0.51
PNKP-213ENST00000599543 EPN3Q9H201 632 aa18.26■□□□□ 0.51
PNKP-213ENST00000599543 FGF21Q9NSA1 209 aa18.26■□□□□ 0.51
PNKP-213ENST00000599543 FEZ2Q9UHY8 353 aaPredicted RBP18.26■□□□□ 0.51
PNKP-213ENST00000599543 ANAPC2Q9UJX6 822 aa18.26■□□□□ 0.51
PNKP-213ENST00000599543 ZNF148Q9UQR1 794 aa18.26■□□□□ 0.51
PNKP-213ENST00000599543 POLHQ9Y253 713 aa18.26■□□□□ 0.51
PNKP-213ENST00000599543 PCDHGA6Q9Y5G7 932 aa18.26■□□□□ 0.51
PNKP-213ENST00000599543 HEBP2Q9Y5Z4 205 aa18.26■□□□□ 0.51
PNKP-213ENST00000599543 KCNMB2Q9Y691 235 aa18.26■□□□□ 0.51
PNKP-213ENST00000599543 SPTBP11277 2137 aa18.25■□□□□ 0.51
PNKP-213ENST00000599543 CDC14CA4D256 554 aa18.25■□□□□ 0.51
PNKP-213ENST00000599543 OR6C74A6NCV1 312 aa18.25■□□□□ 0.51
PNKP-213ENST00000599543 AGAP14A8MT82 685 aa18.25■□□□□ 0.51
PNKP-213ENST00000599543 C21orf140B9A014 251 aa18.25■□□□□ 0.51
PNKP-213ENST00000599543 METTL18O95568 372 aa18.25■□□□□ 0.51
PNKP-213ENST00000599543 ZBTB11O95625 1053 aaPredicted RBP18.25■□□□□ 0.51
PNKP-213ENST00000599543 IFNB1P01574 187 aa18.25■□□□□ 0.51
PNKP-213ENST00000599543 POLBP06746 335 aa18.25■□□□□ 0.51
PNKP-213ENST00000599543 TUBB4BP68371 445 aa18.25■□□□□ 0.51
PNKP-213ENST00000599543 PRKAA1Q13131 559 aa18.25■□□□□ 0.51
PNKP-213ENST00000599543 TUBB2AQ13885 445 aa18.25■□□□□ 0.51
PNKP-213ENST00000599543 OASLQ15646 514 aaKnown RBP18.25■□□□□ 0.51
PNKP-213ENST00000599543 CERS6Q6ZMG9 384 aa18.25■□□□□ 0.51
PNKP-213ENST00000599543 ARHGEF18Q6ZSZ5 1173 aa18.25■□□□□ 0.51
PNKP-213ENST00000599543 GLIS1Q8NBF1 620 aa18.25■□□□□ 0.51
PNKP-213ENST00000599543 HM13Q8TCT9 377 aa18.25■□□□□ 0.51
PNKP-213ENST00000599543 CT55Q8WUE5 264 aa18.25■□□□□ 0.51
PNKP-213ENST00000599543 UBE2Q2Q8WVN8 375 aa18.25■□□□□ 0.51
PNKP-213ENST00000599543 C19orf43Q9BQ61 176 aa18.25■□□□□ 0.51
PNKP-213ENST00000599543 CCM2Q9BSQ5 444 aa18.25■□□□□ 0.51
PNKP-213ENST00000599543 TUBB2BQ9BVA1 445 aa18.25■□□□□ 0.51
PNKP-213ENST00000599543 FAM96AQ9H5X1 160 aa18.25■□□□□ 0.51
PNKP-213ENST00000599543 SOHLH2Q9NX45 425 aa18.25■□□□□ 0.51
PNKP-213ENST00000599543 MAST4O15021 2626 aa18.25■□□□□ 0.51
PNKP-213ENST00000599543 PIPSLA2A3N6 862 aa18.24■□□□□ 0.51
PNKP-213ENST00000599543 FANCGO15287 622 aa18.24■□□□□ 0.51
PNKP-213ENST00000599543 SGTAO43765 313 aa18.24■□□□□ 0.51
PNKP-213ENST00000599543 CREG1O75629 220 aa18.24■□□□□ 0.51
PNKP-213ENST00000599543 ZSCAN5DPP0CG00 497 aa18.24■□□□□ 0.51
PNKP-213ENST00000599543 ATP1B2P14415 290 aaPredicted RBP18.24■□□□□ 0.51
PNKP-213ENST00000599543 NDUFS1P28331 727 aa18.24■□□□□ 0.51
PNKP-213ENST00000599543 MC4RP32245 332 aa18.24■□□□□ 0.51
PNKP-213ENST00000599543 CASRP41180 1078 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms