RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 UNC79Q9P2D8 2635 aa13.43□□□□□ -0.26
SCAF1-203ENST00000598359 DOPEY2Q9Y3R5 2298 aa13.42□□□□□ -0.26
SCAF1-203ENST00000598359 IGLV3-16A0A075B6K0 115 aa13.42□□□□□ -0.26
SCAF1-203ENST00000598359 TRBV5-4A0A0C4DH59 114 aa13.42□□□□□ -0.26
SCAF1-203ENST00000598359 OR6C74A6NCV1 312 aa13.42□□□□□ -0.26
SCAF1-203ENST00000598359 ZNF189O75820 626 aaPredicted RBP13.42□□□□□ -0.26
SCAF1-203ENST00000598359 DLGAP3O95886 979 aa13.42□□□□□ -0.26
SCAF1-203ENST00000598359 ZSCAN5DPP0CG00 497 aa13.42□□□□□ -0.26
SCAF1-203ENST00000598359 PRKAR1AP10644 381 aa13.42□□□□□ -0.26
SCAF1-203ENST00000598359 ACRV1P26436 265 aa13.42□□□□□ -0.26
SCAF1-203ENST00000598359 PDHA2P29803 388 aa13.42□□□□□ -0.26
SCAF1-203ENST00000598359 PREPP48147 710 aa13.42□□□□□ -0.26
SCAF1-203ENST00000598359 RPS6KA1Q15418 735 aa13.42□□□□□ -0.26
SCAF1-203ENST00000598359 DBN1Q16643 649 aa13.42□□□□□ -0.26
SCAF1-203ENST00000598359 GPR33Q49SQ1 333 aa13.42□□□□□ -0.26
SCAF1-203ENST00000598359 MEI1Q5TIA1 1274 aa13.42□□□□□ -0.26
SCAF1-203ENST00000598359 CAPRIN2Q6IMN6 1127 aaKnown RBP13.42□□□□□ -0.26
SCAF1-203ENST00000598359 DNAAF3Q8N9W5 541 aa13.42□□□□□ -0.26
SCAF1-203ENST00000598359 GALNT6Q8NCL4 622 aa13.42□□□□□ -0.26
SCAF1-203ENST00000598359 HM13Q8TCT9 377 aa13.42□□□□□ -0.26
SCAF1-203ENST00000598359 KLHL6Q8WZ60 621 aa13.42□□□□□ -0.26
SCAF1-203ENST00000598359 MED8Q96G25 268 aa13.42□□□□□ -0.26
SCAF1-203ENST00000598359 LINC00615Q96LM1 132 aaPredicted RBP13.42□□□□□ -0.26
SCAF1-203ENST00000598359 MAP3K3Q99759 626 aa13.42□□□□□ -0.26
SCAF1-203ENST00000598359 ARHGAP9Q9BRR9 750 aa13.42□□□□□ -0.26
SCAF1-203ENST00000598359 ZPBPQ9BS86 351 aa13.42□□□□□ -0.26
SCAF1-203ENST00000598359 ULBP3Q9BZM4 244 aa13.42□□□□□ -0.26
SCAF1-203ENST00000598359 GPN2Q9H9Y4 310 aaPredicted RBP13.42□□□□□ -0.26
SCAF1-203ENST00000598359 HRASLS2Q9NWW9 162 aa13.42□□□□□ -0.26
SCAF1-203ENST00000598359 SMARCAL1Q9NZC9 954 aa13.42□□□□□ -0.26
SCAF1-203ENST00000598359 EPHA6Q9UF33 1036 aa13.42□□□□□ -0.26
SCAF1-203ENST00000598359 SLC2A6Q9UGQ3 507 aa13.42□□□□□ -0.26
SCAF1-203ENST00000598359 SLC24A2Q9UI40 661 aa13.42□□□□□ -0.26
SCAF1-203ENST00000598359 TMEM184BQ9Y519 407 aaPredicted RBP13.42□□□□□ -0.26
SCAF1-203ENST00000598359 MRPS18BQ9Y676 258 aaKnown RBP13.42□□□□□ -0.26
SCAF1-203ENST00000598359 PRSS21Q9Y6M0 314 aa13.42□□□□□ -0.26
SCAF1-203ENST00000598359 CCDC162PA2VCL2 907 aa13.41□□□□□ -0.26
SCAF1-203ENST00000598359 OR5K3A6NET4 321 aa13.41□□□□□ -0.26
SCAF1-203ENST00000598359 MROH6A6NGR9 719 aa13.41□□□□□ -0.26
SCAF1-203ENST00000598359 CFAP99D6REC4 459 aa13.41□□□□□ -0.26
SCAF1-203ENST00000598359 H7C0S8 307 aa13.41□□□□□ -0.26
SCAF1-203ENST00000598359 TOX3O15405 576 aaPredicted RBP13.41□□□□□ -0.26
SCAF1-203ENST00000598359 NKX2-8O15522 239 aa13.41□□□□□ -0.26
SCAF1-203ENST00000598359 PSMD3O43242 534 aa13.41□□□□□ -0.26
SCAF1-203ENST00000598359 KIAA0754O94854 1291 aa13.41□□□□□ -0.26
SCAF1-203ENST00000598359 TIAF1O95411 115 aa13.41□□□□□ -0.26
SCAF1-203ENST00000598359 EBLN1P0CF75 366 aa13.41□□□□□ -0.26
SCAF1-203ENST00000598359 FOLR1P15328 257 aa13.41□□□□□ -0.26
SCAF1-203ENST00000598359 NELFEP18615 380 aaKnown RBP13.41□□□□□ -0.26
SCAF1-203ENST00000598359 F8A1P23610 371 aa13.41□□□□□ -0.26
SCAF1-203ENST00000598359 MAP4P27816 1152 aaKnown RBP13.41□□□□□ -0.26
SCAF1-203ENST00000598359 LMAN1P49257 510 aa13.41□□□□□ -0.26
SCAF1-203ENST00000598359 CACNG1Q06432 222 aa13.41□□□□□ -0.26
SCAF1-203ENST00000598359 KRT33BQ14525 404 aa13.41□□□□□ -0.26
SCAF1-203ENST00000598359 NAA30Q147X3 362 aaPredicted RBP13.41□□□□□ -0.26
SCAF1-203ENST00000598359 SIX1Q15475 284 aaPredicted RBP13.41□□□□□ -0.26
SCAF1-203ENST00000598359 ZNF658BQ4V348 819 aaPredicted RBP13.41□□□□□ -0.26
SCAF1-203ENST00000598359 ATP1A1-AS1Q5TC04 95 aa13.41□□□□□ -0.26
SCAF1-203ENST00000598359 NAPRTQ6XQN6 538 aa13.41□□□□□ -0.26
SCAF1-203ENST00000598359 PPP1R21Q6ZMI0 780 aa13.41□□□□□ -0.26
SCAF1-203ENST00000598359 RASGRP3Q8IV61 690 aa13.41□□□□□ -0.26
SCAF1-203ENST00000598359 PHC3Q8NDX5 983 aa13.41□□□□□ -0.26
SCAF1-203ENST00000598359 OR4E2Q8NGC2 313 aa13.41□□□□□ -0.26
SCAF1-203ENST00000598359 STYXQ8WUJ0 223 aa13.41□□□□□ -0.26
SCAF1-203ENST00000598359 ZNF778Q96MU6 729 aa13.41□□□□□ -0.26
SCAF1-203ENST00000598359 ALS2CR12Q96Q35 445 aa13.41□□□□□ -0.26
SCAF1-203ENST00000598359 CCM2Q9BSQ5 444 aa13.41□□□□□ -0.26
SCAF1-203ENST00000598359 RAB33BQ9H082 229 aa13.41□□□□□ -0.26
SCAF1-203ENST00000598359 KIR3DX1Q9H7L2 352 aa13.41□□□□□ -0.26
SCAF1-203ENST00000598359 COG4Q9H9E3 785 aa13.41□□□□□ -0.26
SCAF1-203ENST00000598359 RAB6BQ9NRW1 208 aa13.41□□□□□ -0.26
SCAF1-203ENST00000598359 JRKLQ9Y4A0 524 aa13.41□□□□□ -0.26
SCAF1-203ENST00000598359 BOD1L1Q8NFC6 3051 aa13.4□□□□□ -0.26
SCAF1-203ENST00000598359 B8ZZF3 427 aa13.4□□□□□ -0.26
SCAF1-203ENST00000598359 E7EVH7 732 aa13.4□□□□□ -0.26
SCAF1-203ENST00000598359 SPAG6O75602 509 aa13.4□□□□□ -0.26
SCAF1-203ENST00000598359 ITGB2P05107 769 aa13.4□□□□□ -0.26
SCAF1-203ENST00000598359 H2AFXP16104 143 aaPredicted RBP13.4□□□□□ -0.26
SCAF1-203ENST00000598359 POLR2CP19387 275 aaPredicted RBP13.4□□□□□ -0.26
SCAF1-203ENST00000598359 STIP1P31948 543 aaKnown RBP13.4□□□□□ -0.26
SCAF1-203ENST00000598359 KPNA2P52292 529 aaKnown RBP13.4□□□□□ -0.26
SCAF1-203ENST00000598359 NFKB2Q00653 900 aa13.4□□□□□ -0.26
SCAF1-203ENST00000598359 SRSF1Q07955 248 aaKnown RBP eCLIP13.4□□□□□ -0.26
SCAF1-203ENST00000598359 CDH17Q12864 832 aa13.4□□□□□ -0.26
SCAF1-203ENST00000598359 NFATC3Q12968 1075 aa13.4□□□□□ -0.26
SCAF1-203ENST00000598359 BRD3Q15059 726 aa13.4□□□□□ -0.26
SCAF1-203ENST00000598359 ERCC6LQ2NKX8 1250 aa13.4□□□□□ -0.26
SCAF1-203ENST00000598359 KLHL35Q6PF15 583 aa13.4□□□□□ -0.26
SCAF1-203ENST00000598359 LINC00523Q86TU6 105 aa13.4□□□□□ -0.26
SCAF1-203ENST00000598359 SIDT2Q8NBJ9 832 aaKnown RBP13.4□□□□□ -0.26
SCAF1-203ENST00000598359 OR13J1Q8NGT2 312 aa13.4□□□□□ -0.26
SCAF1-203ENST00000598359 UBXN4Q92575 508 aa13.4□□□□□ -0.26
SCAF1-203ENST00000598359 KIAA1143Q96AT1 154 aaPredicted RBP13.4□□□□□ -0.26
SCAF1-203ENST00000598359 SLC41A2Q96JW4 573 aa13.4□□□□□ -0.26
SCAF1-203ENST00000598359 FERD3LQ96RJ6 166 aa13.4□□□□□ -0.26
SCAF1-203ENST00000598359 C19orf43Q9BQ61 176 aa13.4□□□□□ -0.26
SCAF1-203ENST00000598359 OR52A5Q9H2C5 316 aa13.4□□□□□ -0.26
SCAF1-203ENST00000598359 LNPEPQ9UIQ6 1025 aa13.4□□□□□ -0.26
SCAF1-203ENST00000598359 RPS6KL1Q9Y6S9 549 aa13.4□□□□□ -0.26
SCAF1-203ENST00000598359 UBA6A0AVT1 1052 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms