RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 SLC5A10A0PJK1 596 aa12.72□□□□□ -0.37
USE1-207ENST00000596136 OR5K3A6NET4 321 aa12.72□□□□□ -0.37
USE1-207ENST00000596136 TK2O00142 265 aa12.72□□□□□ -0.37
USE1-207ENST00000596136 PGRMC1O00264 195 aaKnown RBP12.72□□□□□ -0.37
USE1-207ENST00000596136 ATXN7O15265 892 aaPredicted RBP12.72□□□□□ -0.37
USE1-207ENST00000596136 FTH1P02794 183 aa12.72□□□□□ -0.37
USE1-207ENST00000596136 NELFEP18615 380 aaKnown RBP12.72□□□□□ -0.37
USE1-207ENST00000596136 PDHA2P29803 388 aa12.72□□□□□ -0.37
USE1-207ENST00000596136 SESN2P58004 480 aaPredicted RBP12.72□□□□□ -0.37
USE1-207ENST00000596136 PRAMEP78395 509 aa12.72□□□□□ -0.37
USE1-207ENST00000596136 RHDQ02161 417 aa12.72□□□□□ -0.37
USE1-207ENST00000596136 PLOD1Q02809 727 aaPredicted RBP12.72□□□□□ -0.37
USE1-207ENST00000596136 IL11RAQ14626 422 aa12.72□□□□□ -0.37
USE1-207ENST00000596136 CACHD1Q5VU97 1274 aa12.72□□□□□ -0.37
USE1-207ENST00000596136 DUS1LQ6P1R4 473 aaKnown RBP12.72□□□□□ -0.37
USE1-207ENST00000596136 PCSK4Q6UW60 755 aa12.72□□□□□ -0.37
USE1-207ENST00000596136 CARFQ8N187 725 aa12.72□□□□□ -0.37
USE1-207ENST00000596136 ACVR1CQ8NER5 493 aa12.72□□□□□ -0.37
USE1-207ENST00000596136 OR6P1Q8NGX9 317 aa12.72□□□□□ -0.37
USE1-207ENST00000596136 COG1Q8WTW3 980 aa12.72□□□□□ -0.37
USE1-207ENST00000596136 UBXN4Q92575 508 aa12.72□□□□□ -0.37
USE1-207ENST00000596136 MAGOHBQ96A72 148 aaKnown RBP12.72□□□□□ -0.37
USE1-207ENST00000596136 CD180Q99467 661 aa12.72□□□□□ -0.37
USE1-207ENST00000596136 TTC1Q99614 292 aa12.72□□□□□ -0.37
USE1-207ENST00000596136 MVB12BQ9H7P6 319 aa12.72□□□□□ -0.37
USE1-207ENST00000596136 APMAPQ9HDC9 416 aa12.72□□□□□ -0.37
USE1-207ENST00000596136 HRASLS2Q9NWW9 162 aa12.72□□□□□ -0.37
USE1-207ENST00000596136 SNX12Q9UMY4 172 aa12.72□□□□□ -0.37
USE1-207ENST00000596136 ATRXP46100 2492 aa12.71□□□□□ -0.37
USE1-207ENST00000596136 ERVH48-1M5A8F1 160 aa12.71□□□□□ -0.37
USE1-207ENST00000596136 POLR1CO15160 346 aaPredicted RBP12.71□□□□□ -0.37
USE1-207ENST00000596136 KIF5CO60282 957 aa12.71□□□□□ -0.37
USE1-207ENST00000596136 OR1I1O60431 355 aa12.71□□□□□ -0.37
USE1-207ENST00000596136 KRT14P02533 472 aa12.71□□□□□ -0.37
USE1-207ENST00000596136 OR56A5P0C7T3 313 aa12.71□□□□□ -0.37
USE1-207ENST00000596136 ACADLP28330 430 aa12.71□□□□□ -0.37
USE1-207ENST00000596136 PPARGP37231 505 aaPredicted RBP12.71□□□□□ -0.37
USE1-207ENST00000596136 PPP1CAP62136 330 aa12.71□□□□□ -0.37
USE1-207ENST00000596136 CRADDP78560 199 aa12.71□□□□□ -0.37
USE1-207ENST00000596136 GPS1Q13098 491 aa12.71□□□□□ -0.37
USE1-207ENST00000596136 SRSF6Q13247 344 aaKnown RBP12.71□□□□□ -0.37
USE1-207ENST00000596136 BOP1Q14137 746 aaKnown RBP12.71□□□□□ -0.37
USE1-207ENST00000596136 SEMA3AQ14563 771 aa12.71□□□□□ -0.37
USE1-207ENST00000596136 GSE1Q14687 1217 aa12.71□□□□□ -0.37
USE1-207ENST00000596136 PLCL1Q15111 1095 aa12.71□□□□□ -0.37
USE1-207ENST00000596136 FASTKD1Q53R41 847 aaKnown RBP12.71□□□□□ -0.37
USE1-207ENST00000596136 AARS2Q5JTZ9 985 aaKnown RBP12.71□□□□□ -0.37
USE1-207ENST00000596136 MANEAQ5SRI9 462 aa12.71□□□□□ -0.37
USE1-207ENST00000596136 IRGCQ6NXR0 463 aa12.71□□□□□ -0.37
USE1-207ENST00000596136 ZNF449Q6P9G9 518 aa12.71□□□□□ -0.37
USE1-207ENST00000596136 CCDC137Q6PK04 289 aaKnown RBP12.71□□□□□ -0.37
USE1-207ENST00000596136 KMT5CQ86Y97 462 aa12.71□□□□□ -0.37
USE1-207ENST00000596136 MCUQ8NE86 351 aa12.71□□□□□ -0.37
USE1-207ENST00000596136 TTC9Q92623 222 aa12.71□□□□□ -0.37
USE1-207ENST00000596136 CARD6Q9BX69 1037 aa12.71□□□□□ -0.37
USE1-207ENST00000596136 AP1M1Q9BXS5 423 aa12.71□□□□□ -0.37
USE1-207ENST00000596136 TWSG1Q9GZX9 223 aa12.71□□□□□ -0.37
USE1-207ENST00000596136 TFB2MQ9H5Q4 396 aaKnown RBP12.71□□□□□ -0.37
USE1-207ENST00000596136 TRMT1Q9NXH9 659 aaKnown RBP12.71□□□□□ -0.37
USE1-207ENST00000596136 FAM8A1Q9UBU6 413 aa12.71□□□□□ -0.37
USE1-207ENST00000596136 SOX13Q9UN79 622 aa12.71□□□□□ -0.37
USE1-207ENST00000596136 IGHV5-51A0A0C4DH38 117 aa12.7□□□□□ -0.38
USE1-207ENST00000596136 TLCD2A6NGC4 264 aa12.7□□□□□ -0.38
USE1-207ENST00000596136 BHMG1C9JSJ3 638 aaPredicted RBP12.7□□□□□ -0.38
USE1-207ENST00000596136 F8W8V4 182 aa12.7□□□□□ -0.38
USE1-207ENST00000596136 IFRD1O00458 451 aaPredicted RBP12.7□□□□□ -0.38
USE1-207ENST00000596136 CD3EAPO15446 510 aaKnown RBP12.7□□□□□ -0.38
USE1-207ENST00000596136 PHF2O75151 1096 aa12.7□□□□□ -0.38
USE1-207ENST00000596136 RASSF9O75901 435 aa12.7□□□□□ -0.38
USE1-207ENST00000596136 DLGAP3O95886 979 aa12.7□□□□□ -0.38
USE1-207ENST00000596136 FGF5P12034 268 aa12.7□□□□□ -0.38
USE1-207ENST00000596136 MLNP12872 115 aa12.7□□□□□ -0.38
USE1-207ENST00000596136 WT1P19544 449 aaPredicted RBP12.7□□□□□ -0.38
USE1-207ENST00000596136 MGAT1P26572 445 aa12.7□□□□□ -0.38
USE1-207ENST00000596136 ARNTP27540 789 aa12.7□□□□□ -0.38
USE1-207ENST00000596136 NMBRP28336 390 aa12.7□□□□□ -0.38
USE1-207ENST00000596136 PREPP48147 710 aa12.7□□□□□ -0.38
USE1-207ENST00000596136 FNTAP49354 379 aa12.7□□□□□ -0.38
USE1-207ENST00000596136 TTPAP49638 278 aa12.7□□□□□ -0.38
USE1-207ENST00000596136 SEPHS1P49903 392 aa12.7□□□□□ -0.38
USE1-207ENST00000596136 SH3BP2P78314 561 aa12.7□□□□□ -0.38
USE1-207ENST00000596136 SARNPP82979 210 aaKnown RBP12.7□□□□□ -0.38
USE1-207ENST00000596136 MAP7Q14244 749 aa12.7□□□□□ -0.38
USE1-207ENST00000596136 TRIP13Q15645 432 aaPredicted RBP12.7□□□□□ -0.38
USE1-207ENST00000596136 FAM92BQ6ZTR7 304 aa12.7□□□□□ -0.38
USE1-207ENST00000596136 TIPARPQ7Z3E1 657 aaKnown RBP12.7□□□□□ -0.38
USE1-207ENST00000596136 CAND1Q86VP6 1230 aaKnown RBP12.7□□□□□ -0.38
USE1-207ENST00000596136 OOSP2Q86WS3 158 aa12.7□□□□□ -0.38
USE1-207ENST00000596136 MPP5Q8N3R9 675 aa12.7□□□□□ -0.38
USE1-207ENST00000596136 JPH3Q8WXH2 748 aaPredicted RBP12.7□□□□□ -0.38
USE1-207ENST00000596136 CPT1BQ92523 772 aa12.7□□□□□ -0.38
USE1-207ENST00000596136 TFGQ92734 400 aaPredicted RBP12.7□□□□□ -0.38
USE1-207ENST00000596136 FERD3LQ96RJ6 166 aa12.7□□□□□ -0.38
USE1-207ENST00000596136 MAP3K3Q99759 626 aa12.7□□□□□ -0.38
USE1-207ENST00000596136 CTRCQ99895 268 aa12.7□□□□□ -0.38
USE1-207ENST00000596136 TRIT1Q9H3H1 467 aaKnown RBP12.7□□□□□ -0.38
USE1-207ENST00000596136 CATSPERZQ9NTU4 200 aa12.7□□□□□ -0.38
USE1-207ENST00000596136 SYBUQ9NX95 663 aa12.7□□□□□ -0.38
USE1-207ENST00000596136 MARCH4Q9P2E8 410 aaPredicted RBP12.7□□□□□ -0.38
USE1-207ENST00000596136 PIEZO2Q9H5I5 2752 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms