RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 CFAP20Q9Y6A4 193 aaKnown RBP14.04□□□□□ -0.16
LIG1-208ENST00000595758 PRAMEF33A0A0G2JMD5 474 aa14.03□□□□□ -0.16
LIG1-208ENST00000595758 A0A1W2PQM1 296 aa14.03□□□□□ -0.16
LIG1-208ENST00000595758 NTN3O00634 580 aaPredicted RBP14.03□□□□□ -0.16
LIG1-208ENST00000595758 CASC3O15234 703 aaKnown RBP14.03□□□□□ -0.16
LIG1-208ENST00000595758 NIPSNAP2O75323 286 aa14.03□□□□□ -0.16
LIG1-208ENST00000595758 TCEA3O75764 348 aa14.03□□□□□ -0.16
LIG1-208ENST00000595758 CHRM3P20309 590 aa14.03□□□□□ -0.16
LIG1-208ENST00000595758 SSTR1P30872 391 aa14.03□□□□□ -0.16
LIG1-208ENST00000595758 CD151P48509 253 aa14.03□□□□□ -0.16
LIG1-208ENST00000595758 HSPA14Q0VDF9 509 aa14.03□□□□□ -0.16
LIG1-208ENST00000595758 CUL1Q13616 776 aa14.03□□□□□ -0.16
LIG1-208ENST00000595758 SPIDRQ14159 915 aa14.03□□□□□ -0.16
LIG1-208ENST00000595758 KRT33BQ14525 404 aa14.03□□□□□ -0.16
LIG1-208ENST00000595758 ZNF549Q6P9A3 640 aa14.03□□□□□ -0.16
LIG1-208ENST00000595758 CNSTQ6PJW8 725 aa14.03□□□□□ -0.16
LIG1-208ENST00000595758 RBM44Q6ZP01 1051 aaKnown RBP14.03□□□□□ -0.16
LIG1-208ENST00000595758 C3orf62Q6ZUJ4 267 aa14.03□□□□□ -0.16
LIG1-208ENST00000595758 OTOAQ7RTW8 1153 aa14.03□□□□□ -0.16
LIG1-208ENST00000595758 PDZD3Q86UT5 571 aa14.03□□□□□ -0.16
LIG1-208ENST00000595758 C9orf72Q96LT7 481 aa14.03□□□□□ -0.16
LIG1-208ENST00000595758 SCNM1Q9BWG6 230 aa14.03□□□□□ -0.16
LIG1-208ENST00000595758 TSPYL1Q9H0U9 437 aa14.03□□□□□ -0.16
LIG1-208ENST00000595758 ZFATQ9P243 1243 aa14.03□□□□□ -0.16
LIG1-208ENST00000595758 WASF3Q9UPY6 502 aa14.03□□□□□ -0.16
LIG1-208ENST00000595758 CLCA2Q9UQC9 943 aa14.03□□□□□ -0.16
LIG1-208ENST00000595758 HEBP2Q9Y5Z4 205 aa14.03□□□□□ -0.16
LIG1-208ENST00000595758 COLEC10Q9Y6Z7 277 aa14.03□□□□□ -0.16
LIG1-208ENST00000595758 IGHV1OR21-1A0A087WYE8 117 aa14.02□□□□□ -0.17
LIG1-208ENST00000595758 FAM149AA5PLN7 773 aa14.02□□□□□ -0.17
LIG1-208ENST00000595758 LILRA5A6NI73 299 aa14.02□□□□□ -0.17
LIG1-208ENST00000595758 E5RI56 91 aa14.02□□□□□ -0.17
LIG1-208ENST00000595758 GPC4O75487 556 aa14.02□□□□□ -0.17
LIG1-208ENST00000595758 AHSGP02765 367 aa14.02□□□□□ -0.17
LIG1-208ENST00000595758 GSTA2P09210 222 aa14.02□□□□□ -0.17
LIG1-208ENST00000595758 SPINK2P20155 84 aa14.02□□□□□ -0.17
LIG1-208ENST00000595758 NDUFS1P28331 727 aa14.02□□□□□ -0.17
LIG1-208ENST00000595758 GABRB3P28472 473 aa14.02□□□□□ -0.17
LIG1-208ENST00000595758 CD1CP29017 333 aa14.02□□□□□ -0.17
LIG1-208ENST00000595758 PPM1FP49593 454 aaPredicted RBP14.02□□□□□ -0.17
LIG1-208ENST00000595758 EPHA4P54764 986 aa14.02□□□□□ -0.17
LIG1-208ENST00000595758 GPLD1P80108 840 aa14.02□□□□□ -0.17
LIG1-208ENST00000595758 GPR18Q14330 331 aa14.02□□□□□ -0.17
LIG1-208ENST00000595758 NKAIN2Q5VXU1 208 aa14.02□□□□□ -0.17
LIG1-208ENST00000595758 DUS1LQ6P1R4 473 aaKnown RBP14.02□□□□□ -0.17
LIG1-208ENST00000595758 USP53Q70EK8 1073 aa14.02□□□□□ -0.17
LIG1-208ENST00000595758 GALNT7Q86SF2 657 aa14.02□□□□□ -0.17
LIG1-208ENST00000595758 SLC22A15Q8IZD6 547 aa14.02□□□□□ -0.17
LIG1-208ENST00000595758 CACTIN-AS1Q8N1I8 211 aa14.02□□□□□ -0.17
LIG1-208ENST00000595758 DCBLD1Q8N8Z6 715 aa14.02□□□□□ -0.17
LIG1-208ENST00000595758 OR10G6Q8NH81 332 aa14.02□□□□□ -0.17
LIG1-208ENST00000595758 ZFPM2Q8WW38 1151 aa14.02□□□□□ -0.17
LIG1-208ENST00000595758 TFGQ92734 400 aaPredicted RBP14.02□□□□□ -0.17
LIG1-208ENST00000595758 FAM136AQ96C01 138 aa14.02□□□□□ -0.17
LIG1-208ENST00000595758 AHCYL2Q96HN2 611 aaKnown RBP14.02□□□□□ -0.17
LIG1-208ENST00000595758 DEPDC7Q96QD5 511 aa14.02□□□□□ -0.17
LIG1-208ENST00000595758 FERD3LQ96RJ6 166 aa14.02□□□□□ -0.17
LIG1-208ENST00000595758 FMO2Q99518 471 aa14.02□□□□□ -0.17
LIG1-208ENST00000595758 TBC1D10AQ9BXI6 508 aa14.02□□□□□ -0.17
LIG1-208ENST00000595758 SLC17A6Q9P2U8 582 aa14.02□□□□□ -0.17
LIG1-208ENST00000595758 KLK13Q9UKR3 277 aa14.02□□□□□ -0.17
LIG1-208ENST00000595758 ATXN7L1Q9ULK2 861 aaPredicted RBP14.02□□□□□ -0.17
LIG1-208ENST00000595758 COMMD10Q9Y6G5 202 aa14.02□□□□□ -0.17
LIG1-208ENST00000595758 UNC13CQ8NB66 2214 aa14.02□□□□□ -0.17
LIG1-208ENST00000595758 D6RAR5 112 aa14.01□□□□□ -0.17
LIG1-208ENST00000595758 SLCO2B1O94956 709 aa14.01□□□□□ -0.17
LIG1-208ENST00000595758 CPNE6O95741 557 aa14.01□□□□□ -0.17
LIG1-208ENST00000595758 ACADLP28330 430 aa14.01□□□□□ -0.17
LIG1-208ENST00000595758 MAPK9P45984 424 aa14.01□□□□□ -0.17
LIG1-208ENST00000595758 GPX6P59796 221 aa14.01□□□□□ -0.17
LIG1-208ENST00000595758 TARDBPQ13148 414 aaKnown RBP eCLIP14.01□□□□□ -0.171e-7■■■■□ 25.2
LIG1-208ENST00000595758 SQSTM1Q13501 440 aa14.01□□□□□ -0.17
LIG1-208ENST00000595758 CLPPQ16740 277 aaPredicted RBP14.01□□□□□ -0.17
LIG1-208ENST00000595758 PLEKHS1Q5SXH7 462 aa14.01□□□□□ -0.17
LIG1-208ENST00000595758 TEX35Q5T0J7 233 aa14.01□□□□□ -0.17
LIG1-208ENST00000595758 CYS1Q717R9 158 aa14.01□□□□□ -0.17
LIG1-208ENST00000595758 PIM3Q86V86 326 aa14.01□□□□□ -0.17
LIG1-208ENST00000595758 MARCH9Q86YJ5 346 aa14.01□□□□□ -0.17
LIG1-208ENST00000595758 VRK3Q8IV63 474 aa14.01□□□□□ -0.17
LIG1-208ENST00000595758 PHC3Q8NDX5 983 aa14.01□□□□□ -0.17
LIG1-208ENST00000595758 KCNJ9Q92806 393 aa14.01□□□□□ -0.17
LIG1-208ENST00000595758 AARSD1Q9BTE6 412 aaKnown RBP14.01□□□□□ -0.17
LIG1-208ENST00000595758 EPB41L1Q9H4G0 881 aa14.01□□□□□ -0.17
LIG1-208ENST00000595758 MVB12BQ9H7P6 319 aa14.01□□□□□ -0.17
LIG1-208ENST00000595758 RDH14Q9HBH5 336 aa14.01□□□□□ -0.17
LIG1-208ENST00000595758 LRRC4CQ9HCJ2 640 aa14.01□□□□□ -0.17
LIG1-208ENST00000595758 ANGPTL2Q9UKU9 493 aa14.01□□□□□ -0.17
LIG1-208ENST00000595758 CDYLQ9Y232 598 aa14.01□□□□□ -0.17
LIG1-208ENST00000595758 NEUROG3Q9Y4Z2 214 aa14.01□□□□□ -0.17
LIG1-208ENST00000595758 TCRBV9S1A1TA0A576 114 aa14□□□□□ -0.17
LIG1-208ENST00000595758 FAM221BA6H8Z2 402 aa14□□□□□ -0.17
LIG1-208ENST00000595758 DUX1O43812 170 aa14□□□□□ -0.17
LIG1-208ENST00000595758 CSO75390 466 aaKnown RBP14□□□□□ -0.17
LIG1-208ENST00000595758 SPAG6O75602 509 aa14□□□□□ -0.17
LIG1-208ENST00000595758 TYRP1P17643 537 aa14□□□□□ -0.17
LIG1-208ENST00000595758 AMD1P17707 334 aa14□□□□□ -0.17
LIG1-208ENST00000595758 ECHS1P30084 290 aa14□□□□□ -0.17
LIG1-208ENST00000595758 ABCG1P45844 678 aa14□□□□□ -0.17
LIG1-208ENST00000595758 CLCN7P51798 805 aa14□□□□□ -0.17
LIG1-208ENST00000595758 SHC2P98077 582 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms