RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 PRSS21Q9Y6M0 314 aa14.75□□□□□ -0.05
TRIM28-205ENST00000595028 FLNCQ14315 2725 aa14.75□□□□□ -0.05
TRIM28-205ENST00000595028 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.74□□□□□ -0.05
TRIM28-205ENST00000595028 STMND1H3BQB6 276 aa14.74□□□□□ -0.05
TRIM28-205ENST00000595028 AP3B1O00203 1094 aa14.74□□□□□ -0.05
TRIM28-205ENST00000595028 PPP1CAP62136 330 aa14.74□□□□□ -0.05
TRIM28-205ENST00000595028 PRAMEP78395 509 aa14.74□□□□□ -0.05
TRIM28-205ENST00000595028 MC2RQ01718 297 aa14.74□□□□□ -0.05
TRIM28-205ENST00000595028 CYP1B1Q16678 543 aa14.74□□□□□ -0.05
TRIM28-205ENST00000595028 KCTD19Q17RG1 926 aaPredicted RBP14.74□□□□□ -0.05
TRIM28-205ENST00000595028 PCID2Q5JVF3 399 aa14.74□□□□□ -0.05
TRIM28-205ENST00000595028 DCAF12Q5T6F0 453 aa14.74□□□□□ -0.05
TRIM28-205ENST00000595028 ARHGAP40Q5TG30 622 aa14.74□□□□□ -0.05
TRIM28-205ENST00000595028 IRGCQ6NXR0 463 aa14.74□□□□□ -0.05
TRIM28-205ENST00000595028 OR4L1Q8NH43 312 aa14.74□□□□□ -0.05
TRIM28-205ENST00000595028 COG1Q8WTW3 980 aa14.74□□□□□ -0.05
TRIM28-205ENST00000595028 SNRNP27Q8WVK2 155 aaKnown RBP14.74□□□□□ -0.05
TRIM28-205ENST00000595028 ZFPM2Q8WW38 1151 aa14.74□□□□□ -0.05
TRIM28-205ENST00000595028 ZDHHC12Q96GR4 267 aa14.74□□□□□ -0.05
TRIM28-205ENST00000595028 SGSM3Q96HU1 749 aa14.74□□□□□ -0.05
TRIM28-205ENST00000595028 CCNL2Q96S94 520 aaPredicted RBP14.74□□□□□ -0.05
TRIM28-205ENST00000595028 OSBPL9Q96SU4 736 aa14.74□□□□□ -0.05
TRIM28-205ENST00000595028 NAP1L3Q99457 506 aaPredicted RBP14.74□□□□□ -0.05
TRIM28-205ENST00000595028 AP1M1Q9BXS5 423 aa14.74□□□□□ -0.05
TRIM28-205ENST00000595028 IL22Q9GZX6 179 aa14.74□□□□□ -0.05
TRIM28-205ENST00000595028 ZNF768Q9H5H4 540 aaKnown RBP14.74□□□□□ -0.05
TRIM28-205ENST00000595028 KIR3DX1Q9H7L2 352 aa14.74□□□□□ -0.05
TRIM28-205ENST00000595028 TRMT1Q9NXH9 659 aaKnown RBP14.74□□□□□ -0.05
TRIM28-205ENST00000595028 SLC24A2Q9UI40 661 aa14.74□□□□□ -0.05
TRIM28-205ENST00000595028 HEBP2Q9Y5Z4 205 aa14.74□□□□□ -0.05
TRIM28-205ENST00000595028 OR5K3A6NET4 321 aa14.73□□□□□ -0.05
TRIM28-205ENST00000595028 RASSF9O75901 435 aa14.73□□□□□ -0.05
TRIM28-205ENST00000595028 NDUFS1P28331 727 aa14.73□□□□□ -0.05
TRIM28-205ENST00000595028 MAGEA6P43360 314 aa14.73□□□□□ -0.05
TRIM28-205ENST00000595028 PREPP48147 710 aa14.73□□□□□ -0.05
TRIM28-205ENST00000595028 VPS41P49754 854 aa14.73□□□□□ -0.05
TRIM28-205ENST00000595028 CSRP3P50461 194 aa14.73□□□□□ -0.05
TRIM28-205ENST00000595028 CRADDP78560 199 aa14.73□□□□□ -0.05
TRIM28-205ENST00000595028 CDK16Q00536 496 aa14.73□□□□□ -0.05
TRIM28-205ENST00000595028 VAC14Q08AM6 782 aa14.73□□□□□ -0.05
TRIM28-205ENST00000595028 RPA4Q13156 261 aa14.73□□□□□ -0.05
TRIM28-205ENST00000595028 KCNJ11Q14654 390 aa14.73□□□□□ -0.05
TRIM28-205ENST00000595028 GSE1Q14687 1217 aa14.73□□□□□ -0.05
TRIM28-205ENST00000595028 TRIP13Q15645 432 aaPredicted RBP14.73□□□□□ -0.05
TRIM28-205ENST00000595028 LYPLAL1Q5VWZ2 237 aa14.73□□□□□ -0.05
TRIM28-205ENST00000595028 CEACAM20Q6UY09 585 aa14.73□□□□□ -0.05
TRIM28-205ENST00000595028 CERS6Q6ZMG9 384 aa14.73□□□□□ -0.05
TRIM28-205ENST00000595028 FAM92BQ6ZTR7 304 aa14.73□□□□□ -0.05
TRIM28-205ENST00000595028 OR6P1Q8NGX9 317 aa14.73□□□□□ -0.05
TRIM28-205ENST00000595028 ACTRT1Q8TDG2 376 aa14.73□□□□□ -0.05
TRIM28-205ENST00000595028 MAGOHBQ96A72 148 aaKnown RBP14.73□□□□□ -0.05
TRIM28-205ENST00000595028 FBXO8Q9NRD0 319 aa14.73□□□□□ -0.05
TRIM28-205ENST00000595028 TREX1Q9NSU2 369 aa14.73□□□□□ -0.05
TRIM28-205ENST00000595028 WDR70Q9NW82 654 aa14.73□□□□□ -0.05
TRIM28-205ENST00000595028 BFARQ9NZS9 450 aa14.73□□□□□ -0.05
TRIM28-205ENST00000595028 SNX12Q9UMY4 172 aa14.73□□□□□ -0.05
TRIM28-205ENST00000595028 PCDHB11Q9Y5F2 797 aa14.73□□□□□ -0.05
TRIM28-205ENST00000595028 DOPEY2Q9Y3R5 2298 aa14.73□□□□□ -0.05
TRIM28-205ENST00000595028 TCRBV7S3A2A0A539 114 aa14.72□□□□□ -0.05
TRIM28-205ENST00000595028 K7ENP7 123 aa14.72□□□□□ -0.05
TRIM28-205ENST00000595028 IFRD1O00458 451 aaPredicted RBP14.72□□□□□ -0.05
TRIM28-205ENST00000595028 LIN7AO14910 233 aaPredicted RBP14.72□□□□□ -0.05
TRIM28-205ENST00000595028 KIF1CO43896 1103 aaKnown RBP14.72□□□□□ -0.05
TRIM28-205ENST00000595028 PHF2O75151 1096 aa14.72□□□□□ -0.05
TRIM28-205ENST00000595028 KRT14P02533 472 aa14.72□□□□□ -0.05
TRIM28-205ENST00000595028 FTH1P02794 183 aa14.72□□□□□ -0.05
TRIM28-205ENST00000595028 OR56A5P0C7T3 313 aa14.72□□□□□ -0.05
TRIM28-205ENST00000595028 PDHA2P29803 388 aa14.72□□□□□ -0.05
TRIM28-205ENST00000595028 COILP38432 576 aaPredicted RBP14.72□□□□□ -0.05
TRIM28-205ENST00000595028 CD151P48509 253 aa14.72□□□□□ -0.05
TRIM28-205ENST00000595028 NPY2RP49146 381 aa14.72□□□□□ -0.05
TRIM28-205ENST00000595028 SEPHS1P49903 392 aa14.72□□□□□ -0.05
TRIM28-205ENST00000595028 GPS1Q13098 491 aa14.72□□□□□ -0.05
TRIM28-205ENST00000595028 SRSF6Q13247 344 aaKnown RBP14.72□□□□□ -0.05
TRIM28-205ENST00000595028 SEMA3AQ14563 771 aa14.72□□□□□ -0.05
TRIM28-205ENST00000595028 FASTKD1Q53R41 847 aaKnown RBP14.72□□□□□ -0.05
TRIM28-205ENST00000595028 AARS2Q5JTZ9 985 aaKnown RBP14.72□□□□□ -0.05
TRIM28-205ENST00000595028 MANEAQ5SRI9 462 aa14.72□□□□□ -0.05
TRIM28-205ENST00000595028 CACHD1Q5VU97 1274 aa14.72□□□□□ -0.05
TRIM28-205ENST00000595028 LRRC8BQ6P9F7 803 aa14.72□□□□□ -0.05
TRIM28-205ENST00000595028 INO80CQ6PI98 192 aaPredicted RBP14.72□□□□□ -0.05
TRIM28-205ENST00000595028 CCDC81Q6ZN84 652 aa14.72□□□□□ -0.05
TRIM28-205ENST00000595028 VASH2Q86V25 355 aa14.72□□□□□ -0.05
TRIM28-205ENST00000595028 OOSP2Q86WS3 158 aa14.72□□□□□ -0.05
TRIM28-205ENST00000595028 ELMO1Q92556 727 aa14.72□□□□□ -0.05
TRIM28-205ENST00000595028 TTC9Q92623 222 aa14.72□□□□□ -0.05
TRIM28-205ENST00000595028 TTC1Q99614 292 aa14.72□□□□□ -0.05
TRIM28-205ENST00000595028 CTRCQ99895 268 aa14.72□□□□□ -0.05
TRIM28-205ENST00000595028 ZPBPQ9BS86 351 aa14.72□□□□□ -0.05
TRIM28-205ENST00000595028 MRM3Q9HC36 420 aaKnown RBP14.72□□□□□ -0.05
TRIM28-205ENST00000595028 APMAPQ9HDC9 416 aa14.72□□□□□ -0.05
TRIM28-205ENST00000595028 CHRAC1Q9NRG0 131 aa14.72□□□□□ -0.05
TRIM28-205ENST00000595028 CATSPERZQ9NTU4 200 aa14.72□□□□□ -0.05
TRIM28-205ENST00000595028 SYBUQ9NX95 663 aa14.72□□□□□ -0.05
TRIM28-205ENST00000595028 COLEC10Q9Y6Z7 277 aa14.72□□□□□ -0.05
TRIM28-205ENST00000595028 GOLGA6L10A0A0M3HER8 536 aa14.71□□□□□ -0.05
TRIM28-205ENST00000595028 TLCD2A6NGC4 264 aa14.71□□□□□ -0.05
TRIM28-205ENST00000595028 USP27XA6NNY8 438 aa14.71□□□□□ -0.05
TRIM28-205ENST00000595028 CES2O00748 559 aa14.71□□□□□ -0.05
TRIM28-205ENST00000595028 OR1I1O60431 355 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms