RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 FAM117AQ9C073 453 aa22.88■■□□□ 1.25
LSM4-204ENST00000594828 STARD5Q9NSY2 213 aa22.88■■□□□ 1.25
LSM4-204ENST00000594828 GEMIN8Q9NWZ8 242 aaKnown RBP22.88■■□□□ 1.25
LSM4-204ENST00000594828 LNPEPQ9UIQ6 1025 aa22.88■■□□□ 1.25
LSM4-204ENST00000594828 COL6A6A6NMZ7 2263 aa22.87■■□□□ 1.25
LSM4-204ENST00000594828 CCDC78A2IDD5 438 aa22.87■■□□□ 1.25
LSM4-204ENST00000594828 GOLGA6L3A6NEY3 463 aa22.87■■□□□ 1.25
LSM4-204ENST00000594828 IFRD1O00458 451 aaPredicted RBP22.87■■□□□ 1.25
LSM4-204ENST00000594828 ARHGAP6O43182 974 aa22.87■■□□□ 1.25
LSM4-204ENST00000594828 CCNYL3P0C7X3 344 aa22.87■■□□□ 1.25
LSM4-204ENST00000594828 PRKAR1AP10644 381 aa22.87■■□□□ 1.25
LSM4-204ENST00000594828 PSMA3P25788 255 aa22.87■■□□□ 1.25
LSM4-204ENST00000594828 DLSTP36957 453 aa22.87■■□□□ 1.25
LSM4-204ENST00000594828 FDFT1P37268 417 aa22.87■■□□□ 1.25
LSM4-204ENST00000594828 CCR10P46092 362 aa22.87■■□□□ 1.25
LSM4-204ENST00000594828 HSD11B2P80365 405 aa22.87■■□□□ 1.25
LSM4-204ENST00000594828 ACY1Q03154 408 aa22.87■■□□□ 1.25
LSM4-204ENST00000594828 RPS6KA1Q15418 735 aa22.87■■□□□ 1.25
LSM4-204ENST00000594828 DBN1Q16643 649 aa22.87■■□□□ 1.25
LSM4-204ENST00000594828 BPHLQ86WA6 291 aaPredicted RBP22.87■■□□□ 1.25
LSM4-204ENST00000594828 ACVR1CQ8NER5 493 aa22.87■■□□□ 1.25
LSM4-204ENST00000594828 STARD8Q92502 1023 aa22.87■■□□□ 1.25
LSM4-204ENST00000594828 OR52A5Q9H2C5 316 aa22.87■■□□□ 1.25
LSM4-204ENST00000594828 SMARCAL1Q9NZC9 954 aa22.87■■□□□ 1.25
LSM4-204ENST00000594828 E7EVH7 732 aa22.86■■□□□ 1.25
LSM4-204ENST00000594828 AP2A2O94973 939 aa22.86■■□□□ 1.25
LSM4-204ENST00000594828 MT-ND3P03897 115 aa22.86■■□□□ 1.25
LSM4-204ENST00000594828 GSTM1P09488 218 aa22.86■■□□□ 1.25
LSM4-204ENST00000594828 EBLN1P0CF75 366 aa22.86■■□□□ 1.25
LSM4-204ENST00000594828 TCN2P20062 427 aa22.86■■□□□ 1.25
LSM4-204ENST00000594828 MSNP26038 577 aaKnown RBP22.86■■□□□ 1.25
LSM4-204ENST00000594828 NSG1P42857 185 aa22.86■■□□□ 1.25
LSM4-204ENST00000594828 CD151P48509 253 aa22.86■■□□□ 1.25
LSM4-204ENST00000594828 GSTM4Q03013 218 aa22.86■■□□□ 1.25
LSM4-204ENST00000594828 CDC20Q12834 499 aa22.86■■□□□ 1.25
LSM4-204ENST00000594828 PRKAA1Q13131 559 aa22.86■■□□□ 1.25
LSM4-204ENST00000594828 SNX1Q13596 522 aa22.86■■□□□ 1.25
LSM4-204ENST00000594828 ZNF658BQ4V348 819 aaPredicted RBP22.86■■□□□ 1.25
LSM4-204ENST00000594828 CCDC38Q502W7 563 aa22.86■■□□□ 1.25
LSM4-204ENST00000594828 MEI1Q5TIA1 1274 aa22.86■■□□□ 1.25
LSM4-204ENST00000594828 CERS6Q6ZMG9 384 aa22.86■■□□□ 1.25
LSM4-204ENST00000594828 PPP1R21Q6ZMI0 780 aa22.86■■□□□ 1.25
LSM4-204ENST00000594828 D2HGDHQ8N465 521 aa22.86■■□□□ 1.25
LSM4-204ENST00000594828 LCN9Q8WX39 176 aa22.86■■□□□ 1.25
LSM4-204ENST00000594828 FCRL4Q96PJ5 515 aa22.86■■□□□ 1.25
LSM4-204ENST00000594828 ADNPQ9H2P0 1102 aa22.86■■□□□ 1.25
LSM4-204ENST00000594828 CROTQ9UKG9 612 aa22.86■■□□□ 1.25
LSM4-204ENST00000594828 PADI1Q9ULC6 663 aa22.86■■□□□ 1.25
LSM4-204ENST00000594828 HEMK1Q9Y5R4 338 aaPredicted RBP22.86■■□□□ 1.25
LSM4-204ENST00000594828 SLC28A2O43868 658 aa22.85■■□□□ 1.25
LSM4-204ENST00000594828 SUN1O94901 812 aa22.85■■□□□ 1.25
LSM4-204ENST00000594828 ZBTB11O95625 1053 aaPredicted RBP22.85■■□□□ 1.25
LSM4-204ENST00000594828 POLR2CP19387 275 aaPredicted RBP22.85■■□□□ 1.25
LSM4-204ENST00000594828 F8A1P23610 371 aa22.85■■□□□ 1.25
LSM4-204ENST00000594828 PDHA2P29803 388 aa22.85■■□□□ 1.25
LSM4-204ENST00000594828 ARCN1P48444 511 aaKnown RBP22.85■■□□□ 1.25
LSM4-204ENST00000594828 KPNA2P52292 529 aaKnown RBP22.85■■□□□ 1.25
LSM4-204ENST00000594828 POLE2P56282 527 aa22.85■■□□□ 1.25
LSM4-204ENST00000594828 RPA4Q13156 261 aa22.85■■□□□ 1.25
LSM4-204ENST00000594828 LAMB3Q13751 1172 aa22.85■■□□□ 1.25
LSM4-204ENST00000594828 CRTC2Q53ET0 693 aaPredicted RBP22.85■■□□□ 1.25
LSM4-204ENST00000594828 PWWP2BQ6NUJ5 590 aa22.85■■□□□ 1.25
LSM4-204ENST00000594828 C16orf46Q6P387 395 aa22.85■■□□□ 1.25
LSM4-204ENST00000594828 CARFQ8N187 725 aa22.85■■□□□ 1.25
LSM4-204ENST00000594828 SLC25A18Q9H1K4 315 aa22.85■■□□□ 1.25
LSM4-204ENST00000594828 SRMSQ9H3Y6 488 aa22.85■■□□□ 1.25
LSM4-204ENST00000594828 RAB6BQ9NRW1 208 aa22.85■■□□□ 1.25
LSM4-204ENST00000594828 FGF21Q9NSA1 209 aa22.85■■□□□ 1.25
LSM4-204ENST00000594828 PCDHB3Q9Y5E6 796 aa22.85■■□□□ 1.25
LSM4-204ENST00000594828 MRPS18BQ9Y676 258 aaKnown RBP22.85■■□□□ 1.25
LSM4-204ENST00000594828 HEATR9A2RTY3 570 aa22.84■■□□□ 1.25
LSM4-204ENST00000594828 CCDC162PA2VCL2 907 aa22.84■■□□□ 1.25
LSM4-204ENST00000594828 OR51F1A6NGY5 319 aa22.84■■□□□ 1.25
LSM4-204ENST00000594828 TIAF1O95411 115 aa22.84■■□□□ 1.25
LSM4-204ENST00000594828 ETS1P14921 441 aa22.84■■□□□ 1.25
LSM4-204ENST00000594828 OAS2P29728 719 aaKnown RBP22.84■■□□□ 1.25
LSM4-204ENST00000594828 ITIH4Q14624 930 aa22.84■■□□□ 1.25
LSM4-204ENST00000594828 TMTC4Q5T4D3 741 aa22.84■■□□□ 1.25
LSM4-204ENST00000594828 PRICKLE2Q7Z3G6 844 aa22.84■■□□□ 1.25
LSM4-204ENST00000594828 PRUNE1Q86TP1 453 aa22.84■■□□□ 1.25
LSM4-204ENST00000594828 CCDC89Q8N998 374 aa22.84■■□□□ 1.25
LSM4-204ENST00000594828 PHC3Q8NDX5 983 aa22.84■■□□□ 1.25
LSM4-204ENST00000594828 MVB12BQ9H7P6 319 aa22.84■■□□□ 1.25
LSM4-204ENST00000594828 PIEZO2Q9H5I5 2752 aa22.84■■□□□ 1.25
LSM4-204ENST00000594828 CFAP46Q8IYW2 2715 aa22.84■■□□□ 1.25
LSM4-204ENST00000594828 MATN2O00339 956 aa22.83■■□□□ 1.25
LSM4-204ENST00000594828 QSOX1O00391 747 aa22.83■■□□□ 1.25
LSM4-204ENST00000594828 FOXN2P32314 431 aa22.83■■□□□ 1.25
LSM4-204ENST00000594828 GRIA1P42261 906 aa22.83■■□□□ 1.25
LSM4-204ENST00000594828 PREPP48147 710 aa22.83■■□□□ 1.25
LSM4-204ENST00000594828 TUBB4BP68371 445 aa22.83■■□□□ 1.25
LSM4-204ENST00000594828 SEMA5AQ13591 1074 aa22.83■■□□□ 1.25
LSM4-204ENST00000594828 TUBB2AQ13885 445 aa22.83■■□□□ 1.25
LSM4-204ENST00000594828 DEFB109BQ30KR1 87 aa22.83■■□□□ 1.25
LSM4-204ENST00000594828 TFGQ92734 400 aaPredicted RBP22.83■■□□□ 1.25
LSM4-204ENST00000594828 HDAC10Q969S8 669 aa22.83■■□□□ 1.25
LSM4-204ENST00000594828 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.83■■□□□ 1.25
LSM4-204ENST00000594828 PPM1MQ96MI6 270 aa22.83■■□□□ 1.25
LSM4-204ENST00000594828 RANBP9Q96S59 729 aa22.83■■□□□ 1.25
LSM4-204ENST00000594828 TUBB2BQ9BVA1 445 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms