RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 CERS6Q6ZMG9 384 aa18.03■□□□□ 0.48
SHKBP1-202ENST00000593764 PRSS42Q7Z5A4 293 aa18.03■□□□□ 0.48
SHKBP1-202ENST00000593764 KLHL6Q8WZ60 621 aa18.03■□□□□ 0.48
SHKBP1-202ENST00000593764 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.03■□□□□ 0.48
SHKBP1-202ENST00000593764 ZDHHC12Q96GR4 267 aa18.03■□□□□ 0.48
SHKBP1-202ENST00000593764 BBC3Q96PG8 261 aaPredicted RBP18.03■□□□□ 0.48
SHKBP1-202ENST00000593764 KIFC1Q9BW19 673 aa18.03■□□□□ 0.48
SHKBP1-202ENST00000593764 ASPSCR1Q9BZE9 553 aa18.03■□□□□ 0.48
SHKBP1-202ENST00000593764 BFARQ9NZS9 450 aa18.03■□□□□ 0.48
SHKBP1-202ENST00000593764 MARCH4Q9P2E8 410 aaPredicted RBP18.03■□□□□ 0.48
SHKBP1-202ENST00000593764 HEBP2Q9Y5Z4 205 aa18.03■□□□□ 0.48
SHKBP1-202ENST00000593764 COLEC10Q9Y6Z7 277 aa18.03■□□□□ 0.48
SHKBP1-202ENST00000593764 STMND1H3BQB6 276 aa18.02■□□□□ 0.48
SHKBP1-202ENST00000593764 AVILO75366 819 aa18.02■□□□□ 0.48
SHKBP1-202ENST00000593764 ARNTP27540 789 aa18.02■□□□□ 0.48
SHKBP1-202ENST00000593764 CD151P48509 253 aa18.02■□□□□ 0.48
SHKBP1-202ENST00000593764 SEPHS1P49903 392 aa18.02■□□□□ 0.48
SHKBP1-202ENST00000593764 TERF1P54274 439 aa18.02■□□□□ 0.48
SHKBP1-202ENST00000593764 PLCL1Q15111 1095 aa18.02■□□□□ 0.48
SHKBP1-202ENST00000593764 SOWAHCQ53LP3 525 aaPredicted RBP18.02■□□□□ 0.48
SHKBP1-202ENST00000593764 CACHD1Q5VU97 1274 aa18.02■□□□□ 0.48
SHKBP1-202ENST00000593764 IRGCQ6NXR0 463 aa18.02■□□□□ 0.48
SHKBP1-202ENST00000593764 FAM92BQ6ZTR7 304 aa18.02■□□□□ 0.48
SHKBP1-202ENST00000593764 LDB1Q86U70 411 aaPredicted RBP18.02■□□□□ 0.48
SHKBP1-202ENST00000593764 CAND1Q86VP6 1230 aaKnown RBP18.02■□□□□ 0.48
SHKBP1-202ENST00000593764 PHC3Q8NDX5 983 aa18.02■□□□□ 0.48
SHKBP1-202ENST00000593764 CPT1BQ92523 772 aa18.02■□□□□ 0.48
SHKBP1-202ENST00000593764 ANP32BQ92688 251 aaKnown RBP18.02■□□□□ 0.48
SHKBP1-202ENST00000593764 CTRCQ99895 268 aa18.02■□□□□ 0.48
SHKBP1-202ENST00000593764 SYBUQ9NX95 663 aa18.02■□□□□ 0.48
SHKBP1-202ENST00000593764 IGHV5-51A0A0C4DH38 117 aa18.01■□□□□ 0.47
SHKBP1-202ENST00000593764 OR5K3A6NET4 321 aa18.01■□□□□ 0.47
SHKBP1-202ENST00000593764 QSOX1O00391 747 aa18.01■□□□□ 0.47
SHKBP1-202ENST00000593764 LIN7AO14910 233 aaPredicted RBP18.01■□□□□ 0.47
SHKBP1-202ENST00000593764 PHF2O75151 1096 aa18.01■□□□□ 0.47
SHKBP1-202ENST00000593764 RASSF9O75901 435 aa18.01■□□□□ 0.47
SHKBP1-202ENST00000593764 NDUFS1P28331 727 aa18.01■□□□□ 0.47
SHKBP1-202ENST00000593764 SH3BP2P78314 561 aa18.01■□□□□ 0.47
SHKBP1-202ENST00000593764 FASTKD1Q53R41 847 aaKnown RBP18.01■□□□□ 0.47
SHKBP1-202ENST00000593764 KLHL35Q6PF15 583 aa18.01■□□□□ 0.47
SHKBP1-202ENST00000593764 NAPRTQ6XQN6 538 aa18.01■□□□□ 0.47
SHKBP1-202ENST00000593764 CCDC81Q6ZN84 652 aa18.01■□□□□ 0.47
SHKBP1-202ENST00000593764 NKD1Q969G9 470 aa18.01■□□□□ 0.47
SHKBP1-202ENST00000593764 MFSD3Q96ES6 412 aa18.01■□□□□ 0.47
SHKBP1-202ENST00000593764 TEFMQ96QE5 360 aaKnown RBP18.01■□□□□ 0.47
SHKBP1-202ENST00000593764 FERD3LQ96RJ6 166 aa18.01■□□□□ 0.47
SHKBP1-202ENST00000593764 TTC1Q99614 292 aa18.01■□□□□ 0.47
SHKBP1-202ENST00000593764 NRTNQ99748 197 aa18.01■□□□□ 0.47
SHKBP1-202ENST00000593764 MRM3Q9HC36 420 aaKnown RBP18.01■□□□□ 0.47
SHKBP1-202ENST00000593764 CATSPERZQ9NTU4 200 aa18.01■□□□□ 0.47
SHKBP1-202ENST00000593764 HRASLS2Q9NWW9 162 aa18.01■□□□□ 0.47
SHKBP1-202ENST00000593764 PILRAQ9UKJ1 303 aa18.01■□□□□ 0.47
SHKBP1-202ENST00000593764 PYCARDQ9ULZ3 195 aa18.01■□□□□ 0.47
SHKBP1-202ENST00000593764 TEX51A0A1B0GUA7 166 aa18■□□□□ 0.47
SHKBP1-202ENST00000593764 SLC5A10A0PJK1 596 aa18■□□□□ 0.47
SHKBP1-202ENST00000593764 OR6C74A6NCV1 312 aa18■□□□□ 0.47
SHKBP1-202ENST00000593764 CD3EAPO15446 510 aaKnown RBP18■□□□□ 0.47
SHKBP1-202ENST00000593764 TMEM63AO94886 807 aa18■□□□□ 0.47
SHKBP1-202ENST00000593764 FTH1P02794 183 aa18■□□□□ 0.47
SHKBP1-202ENST00000593764 OR56A5P0C7T3 313 aa18■□□□□ 0.47
SHKBP1-202ENST00000593764 ACADLP28330 430 aa18■□□□□ 0.47
SHKBP1-202ENST00000593764 KRT33BQ14525 404 aa18■□□□□ 0.47
SHKBP1-202ENST00000593764 BRD3Q15059 726 aa18■□□□□ 0.47
SHKBP1-202ENST00000593764 CES3Q6UWW8 571 aa18■□□□□ 0.47
SHKBP1-202ENST00000593764 CEACAM20Q6UY09 585 aa18■□□□□ 0.47
SHKBP1-202ENST00000593764 VASH2Q86V25 355 aa18■□□□□ 0.47
SHKBP1-202ENST00000593764 MPP5Q8N3R9 675 aa18■□□□□ 0.47
SHKBP1-202ENST00000593764 ACVR1CQ8NER5 493 aa18■□□□□ 0.47
SHKBP1-202ENST00000593764 OR4E2Q8NGC2 313 aa18■□□□□ 0.47
SHKBP1-202ENST00000593764 ELMO1Q92556 727 aa18■□□□□ 0.47
SHKBP1-202ENST00000593764 TFGQ92734 400 aaPredicted RBP18■□□□□ 0.47
SHKBP1-202ENST00000593764 SLC41A2Q96JW4 573 aa18■□□□□ 0.47
SHKBP1-202ENST00000593764 MAP3K3Q99759 626 aa18■□□□□ 0.47
SHKBP1-202ENST00000593764 ZPBPQ9BS86 351 aa18■□□□□ 0.47
SHKBP1-202ENST00000593764 SOX13Q9UN79 622 aa18■□□□□ 0.47
SHKBP1-202ENST00000593764 PCDHB11Q9Y5F2 797 aa18■□□□□ 0.47
SHKBP1-202ENST00000593764 BHMG1C9JSJ3 638 aaPredicted RBP17.99■□□□□ 0.47
SHKBP1-202ENST00000593764 IFRD1O00458 451 aaPredicted RBP17.99■□□□□ 0.47
SHKBP1-202ENST00000593764 POLR1CO15160 346 aaPredicted RBP17.99■□□□□ 0.47
SHKBP1-202ENST00000593764 NELFEP18615 380 aaKnown RBP17.99■□□□□ 0.47
SHKBP1-202ENST00000593764 WT1P19544 449 aaPredicted RBP17.99■□□□□ 0.47
SHKBP1-202ENST00000593764 CCR7P32248 378 aa17.99■□□□□ 0.47
SHKBP1-202ENST00000593764 FNTAP49354 379 aa17.99■□□□□ 0.47
SHKBP1-202ENST00000593764 BOP1Q14137 746 aaKnown RBP17.99■□□□□ 0.47
SHKBP1-202ENST00000593764 ZNF449Q6P9G9 518 aa17.99■□□□□ 0.47
SHKBP1-202ENST00000593764 MCUQ8NE86 351 aa17.99■□□□□ 0.47
SHKBP1-202ENST00000593764 LKAAEAR1Q8TD35 194 aa17.99■□□□□ 0.47
SHKBP1-202ENST00000593764 MVB12BQ9H7P6 319 aa17.99■□□□□ 0.47
SHKBP1-202ENST00000593764 WDR70Q9NW82 654 aa17.99■□□□□ 0.47
SHKBP1-202ENST00000593764 IQCF5A8MTL0 148 aa17.98■□□□□ 0.47
SHKBP1-202ENST00000593764 VAPBO95292 243 aa17.98■□□□□ 0.47
SHKBP1-202ENST00000593764 TCP1P17987 556 aaKnown RBP17.98■□□□□ 0.47
SHKBP1-202ENST00000593764 PPARGP37231 505 aaPredicted RBP17.98■□□□□ 0.47
SHKBP1-202ENST00000593764 ARCN1P48444 511 aaKnown RBP17.98■□□□□ 0.47
SHKBP1-202ENST00000593764 TTPAP49638 278 aa17.98■□□□□ 0.47
SHKBP1-202ENST00000593764 KPNA2P52292 529 aaKnown RBP17.98■□□□□ 0.47
SHKBP1-202ENST00000593764 SARNPP82979 210 aaKnown RBP17.98■□□□□ 0.47
SHKBP1-202ENST00000593764 FOXM1Q08050 763 aa17.98■□□□□ 0.47
SHKBP1-202ENST00000593764 PRKG2Q13237 762 aa17.98■□□□□ 0.47
SHKBP1-202ENST00000593764 AARS2Q5JTZ9 985 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms