RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 POMT2Q9UKY4 750 aa12.94□□□□□ -0.34
APOC1-209ENST00000592885 REXO2Q9Y3B8 237 aaKnown RBP12.94□□□□□ -0.34
APOC1-209ENST00000592885 CFAP20Q9Y6A4 193 aaKnown RBP12.94□□□□□ -0.34
APOC1-209ENST00000592885 OR6C74A6NCV1 312 aa12.93□□□□□ -0.34
APOC1-209ENST00000592885 QSOX1O00391 747 aa12.93□□□□□ -0.34
APOC1-209ENST00000592885 IFRD1O00458 451 aaPredicted RBP12.93□□□□□ -0.34
APOC1-209ENST00000592885 PSMD3O43242 534 aa12.93□□□□□ -0.34
APOC1-209ENST00000592885 KATNA1O75449 491 aa12.93□□□□□ -0.34
APOC1-209ENST00000592885 RFPL1O75677 317 aa12.93□□□□□ -0.34
APOC1-209ENST00000592885 TIAF1O95411 115 aa12.93□□□□□ -0.34
APOC1-209ENST00000592885 PTMAP06454 111 aaKnown RBP12.93□□□□□ -0.34
APOC1-209ENST00000592885 MSL3P1P0C860 447 aa12.93□□□□□ -0.34
APOC1-209ENST00000592885 ACRV1P26436 265 aa12.93□□□□□ -0.34
APOC1-209ENST00000592885 MC4RP32245 332 aa12.93□□□□□ -0.34
APOC1-209ENST00000592885 PMS2P54278 862 aa12.93□□□□□ -0.34
APOC1-209ENST00000592885 OLIG2Q13516 323 aa12.93□□□□□ -0.34
APOC1-209ENST00000592885 KRT33BQ14525 404 aa12.93□□□□□ -0.34
APOC1-209ENST00000592885 GSE1Q14687 1217 aa12.93□□□□□ -0.34
APOC1-209ENST00000592885 KCNAB1Q14722 419 aa12.93□□□□□ -0.34
APOC1-209ENST00000592885 ATP1A1-AS1Q5TC04 95 aa12.93□□□□□ -0.34
APOC1-209ENST00000592885 TCTN3Q6NUS6 607 aa12.93□□□□□ -0.34
APOC1-209ENST00000592885 DUS1LQ6P1R4 473 aaKnown RBP12.93□□□□□ -0.34
APOC1-209ENST00000592885 ZNF449Q6P9G9 518 aa12.93□□□□□ -0.34
APOC1-209ENST00000592885 RAD9BQ6WBX8 426 aa12.93□□□□□ -0.34
APOC1-209ENST00000592885 PEX26Q7Z412 305 aa12.93□□□□□ -0.34
APOC1-209ENST00000592885 KIAA1328Q86T90 577 aa12.93□□□□□ -0.34
APOC1-209ENST00000592885 PTRH1Q86Y79 214 aaKnown RBP12.93□□□□□ -0.34
APOC1-209ENST00000592885 APLFQ8IW19 511 aaPredicted RBP12.93□□□□□ -0.34
APOC1-209ENST00000592885 CFAP206Q8IYR0 622 aa12.93□□□□□ -0.34
APOC1-209ENST00000592885 SPDYE1Q8NFV5 336 aaPredicted RBP12.93□□□□□ -0.34
APOC1-209ENST00000592885 ZNF501Q96CX3 271 aaPredicted RBP12.93□□□□□ -0.34
APOC1-209ENST00000592885 TWSG1Q9GZX9 223 aa12.93□□□□□ -0.34
APOC1-209ENST00000592885 LACRTQ9GZZ8 138 aa12.93□□□□□ -0.34
APOC1-209ENST00000592885 EPN3Q9H201 632 aa12.93□□□□□ -0.34
APOC1-209ENST00000592885 MVB12BQ9H7P6 319 aa12.93□□□□□ -0.34
APOC1-209ENST00000592885 COG4Q9H9E3 785 aa12.93□□□□□ -0.34
APOC1-209ENST00000592885 C1GALT1Q9NS00 363 aa12.93□□□□□ -0.34
APOC1-209ENST00000592885 NLE1Q9NVX2 485 aaPredicted RBP12.93□□□□□ -0.34
APOC1-209ENST00000592885 AMFRQ9UKV5 643 aa12.93□□□□□ -0.34
APOC1-209ENST00000592885 DUSP10Q9Y6W6 482 aa12.93□□□□□ -0.34
APOC1-209ENST00000592885 CDC14CA4D256 554 aa12.92□□□□□ -0.34
APOC1-209ENST00000592885 ARHGAP6O43182 974 aa12.92□□□□□ -0.34
APOC1-209ENST00000592885 SCRG1O75711 98 aa12.92□□□□□ -0.34
APOC1-209ENST00000592885 AP2A2O94973 939 aa12.92□□□□□ -0.34
APOC1-209ENST00000592885 KPNA2P52292 529 aaKnown RBP12.92□□□□□ -0.34
APOC1-209ENST00000592885 GSDMDP57764 484 aa12.92□□□□□ -0.34
APOC1-209ENST00000592885 RPS15P62841 145 aaKnown RBP12.92□□□□□ -0.34
APOC1-209ENST00000592885 CACNG1Q06432 222 aa12.92□□□□□ -0.34
APOC1-209ENST00000592885 KLRB1Q12918 225 aa12.92□□□□□ -0.34
APOC1-209ENST00000592885 KLF1Q13351 362 aaPredicted RBP12.92□□□□□ -0.34
APOC1-209ENST00000592885 ERV3-1Q14264 604 aa12.92□□□□□ -0.34
APOC1-209ENST00000592885 UGT8Q16880 541 aa12.92□□□□□ -0.34
APOC1-209ENST00000592885 ZNF658BQ4V348 819 aaPredicted RBP12.92□□□□□ -0.34
APOC1-209ENST00000592885 ZNF517Q6ZMY9 492 aaPredicted RBP12.92□□□□□ -0.34
APOC1-209ENST00000592885 SYVN1Q86TM6 617 aa12.92□□□□□ -0.34
APOC1-209ENST00000592885 TMEM126BQ8IUX1 230 aa12.92□□□□□ -0.34
APOC1-209ENST00000592885 ACRBPQ8NEB7 543 aa12.92□□□□□ -0.34
APOC1-209ENST00000592885 STYXQ8WUJ0 223 aa12.92□□□□□ -0.34
APOC1-209ENST00000592885 THAP4Q8WY91 577 aa12.92□□□□□ -0.34
APOC1-209ENST00000592885 CPT1BQ92523 772 aa12.92□□□□□ -0.34
APOC1-209ENST00000592885 DNAJC1Q96KC8 554 aaKnown RBP12.92□□□□□ -0.34
APOC1-209ENST00000592885 FAM118BQ9BPY3 351 aa12.92□□□□□ -0.34
APOC1-209ENST00000592885 OR52A5Q9H2C5 316 aa12.92□□□□□ -0.34
APOC1-209ENST00000592885 ACTL8Q9H568 366 aa12.92□□□□□ -0.34
APOC1-209ENST00000592885 TFB2MQ9H5Q4 396 aaKnown RBP12.92□□□□□ -0.34
APOC1-209ENST00000592885 KCND1Q9NSA2 647 aa12.92□□□□□ -0.34
APOC1-209ENST00000592885 SOHLH2Q9NX45 425 aa12.92□□□□□ -0.34
APOC1-209ENST00000592885 FAM8A1Q9UBU6 413 aa12.92□□□□□ -0.34
APOC1-209ENST00000592885 MAN2B2Q9Y2E5 1009 aa12.92□□□□□ -0.34
APOC1-209ENST00000592885 PIPSLA2A3N6 862 aa12.91□□□□□ -0.34
APOC1-209ENST00000592885 ERI2A8K979 691 aaKnown RBP12.91□□□□□ -0.34
APOC1-209ENST00000592885 MAP3K7O43318 606 aa12.91□□□□□ -0.34
APOC1-209ENST00000592885 AP2A1O95782 977 aa12.91□□□□□ -0.34
APOC1-209ENST00000592885 POLBP06746 335 aa12.91□□□□□ -0.34
APOC1-209ENST00000592885 FURINP09958 794 aa12.91□□□□□ -0.34
APOC1-209ENST00000592885 CDH3P22223 829 aa12.91□□□□□ -0.34
APOC1-209ENST00000592885 PSMA3P25788 255 aa12.91□□□□□ -0.34
APOC1-209ENST00000592885 PTPN4P29074 926 aa12.91□□□□□ -0.34
APOC1-209ENST00000592885 FOXK1P85037 733 aa12.91□□□□□ -0.34
APOC1-209ENST00000592885 TMPRSS15P98073 1019 aa12.91□□□□□ -0.34
APOC1-209ENST00000592885 KIF5AQ12840 1032 aa12.91□□□□□ -0.34
APOC1-209ENST00000592885 SPARCL1Q14515 664 aa12.91□□□□□ -0.34
APOC1-209ENST00000592885 ITIH4Q14624 930 aa12.91□□□□□ -0.34
APOC1-209ENST00000592885 SKIDA1Q1XH10 827 aa12.91□□□□□ -0.34
APOC1-209ENST00000592885 ZRANB3Q5FWF4 1079 aa12.91□□□□□ -0.34
APOC1-209ENST00000592885 IZUMO3Q5VZ72 239 aa12.91□□□□□ -0.34
APOC1-209ENST00000592885 AADACL2Q6P093 401 aa12.91□□□□□ -0.34
APOC1-209ENST00000592885 LINC00523Q86TU6 105 aa12.91□□□□□ -0.34
APOC1-209ENST00000592885 SERPINA9Q86WD7 417 aa12.91□□□□□ -0.34
APOC1-209ENST00000592885 LILRA3Q8N6C8 439 aaPredicted RBP12.91□□□□□ -0.34
APOC1-209ENST00000592885 SLC35B2Q8TB61 432 aa12.91□□□□□ -0.34
APOC1-209ENST00000592885 UBE2Q2Q8WVN8 375 aa12.91□□□□□ -0.34
APOC1-209ENST00000592885 LCN9Q8WX39 176 aa12.91□□□□□ -0.34
APOC1-209ENST00000592885 BAG1Q99933 345 aaPredicted RBP12.91□□□□□ -0.34
APOC1-209ENST00000592885 PITPNM3Q9BZ71 974 aa12.91□□□□□ -0.34
APOC1-209ENST00000592885 SRMSQ9H3Y6 488 aa12.91□□□□□ -0.34
APOC1-209ENST00000592885 ZNF71Q9NQZ8 489 aaPredicted RBP12.91□□□□□ -0.34
APOC1-209ENST00000592885 TP53TG5Q9Y2B4 290 aa12.91□□□□□ -0.34
APOC1-209ENST00000592885 PIKFYVEQ9Y2I7 2098 aa12.9□□□□□ -0.34
APOC1-209ENST00000592885 LIN7AO14910 233 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms