RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 IRX4P78413 519 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 PPARDQ03181 441 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 CACNG1Q06432 222 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 OVGP1Q12889 678 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 PDIA2Q13087 525 aaKnown RBP6.32□□□□□ -1.4
VPS4B-205ENST00000591383 NFATC2Q13469 925 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 FZD2Q14332 565 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 CRYMQ14894 314 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 FASTKD3Q14CZ7 662 aaKnown RBP6.32□□□□□ -1.4
VPS4B-205ENST00000591383 CSRP2Q16527 193 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 SKIDA1Q1XH10 827 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 HLA-BQ31612 363 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 INAVAQ3KP66 663 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 PRRT3Q5FWE3 981 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 PCID2Q5JVF3 399 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 FNBP1LQ5T0N5 605 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 GPRC6AQ5T6X5 926 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 KCTD16Q68DU8 428 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 DUPD1Q68J44 220 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 PDPK2PQ6A1A2 396 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 ZNF470Q6ECI4 717 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 IL27RAQ6UWB1 636 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 ENPP7Q6UWV6 458 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 ZDHHC24Q6UX98 284 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 CENPUQ71F23 418 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 NLRP9Q7RTR0 991 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 GALNT13Q8IUC8 556 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 ZBED8Q8IZ13 594 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 AGGF1Q8N302 714 aaeCLIP6.32□□□□□ -1.4
VPS4B-205ENST00000591383 NXPE1Q8N323 547 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 OXR1Q8N573 874 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 ZNF548Q8NEK5 533 aaPredicted RBP6.32□□□□□ -1.4
VPS4B-205ENST00000591383 OR56A4Q8NGH8 313 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 OR13J1Q8NGT2 312 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 FBXO25Q8TCJ0 367 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 LMX1AQ8TE12 382 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 NAT14Q8WUY8 206 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 IFT81Q8WYA0 676 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 HDAC10Q969S8 669 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 TSACCQ96A04 125 aaPredicted RBP6.32□□□□□ -1.4
VPS4B-205ENST00000591383 DCUN1D1Q96GG9 259 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 C1orf159Q96HA4 380 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 MAGEB10Q96LZ2 347 aaPredicted RBP6.32□□□□□ -1.4
VPS4B-205ENST00000591383 TBATAQ96M53 351 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 OR2M4Q96R27 311 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 FRMD8Q9BZ67 464 aaPredicted RBP6.32□□□□□ -1.4
VPS4B-205ENST00000591383 SLC13A1Q9BZW2 595 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 ZDHHC5Q9C0B5 715 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 OR2AG1Q9H205 316 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 TCEAL2Q9H3H9 227 aaPredicted RBP6.32□□□□□ -1.4
VPS4B-205ENST00000591383 ASB8Q9H765 288 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 L2HGDHQ9H9P8 463 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 UGT1A7Q9HAW7 530 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 UGT1A10Q9HAW8 530 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 UGT1A8Q9HAW9 530 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 IL21RQ9HBE5 538 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 MRM3Q9HC36 420 aaKnown RBP6.32□□□□□ -1.4
VPS4B-205ENST00000591383 EPB41L5Q9HCM4 733 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 SAYSD1Q9NPB0 183 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 MRPL40Q9NQ50 206 aaKnown RBP6.32□□□□□ -1.4
VPS4B-205ENST00000591383 CHRAC1Q9NRG0 131 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 FAM114A2Q9NRY5 505 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 GPR27Q9NS67 375 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 RXFP3Q9NSD7 469 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 MTRF1LQ9UGC7 380 aaKnown RBP6.32□□□□□ -1.4
VPS4B-205ENST00000591383 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.32□□□□□ -1.4
VPS4B-205ENST00000591383 APPL1Q9UKG1 709 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 HS3ST3A1Q9Y663 406 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 RPS6KL1Q9Y6S9 549 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 V9GYY5 206 aaPredicted RBP6.32□□□□□ -1.4
VPS4B-205ENST00000591383 SPTY2D1-AS1A0A0U1RR47 76 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.31□□□□□ -1.4
VPS4B-205ENST00000591383 UBA6A0AVT1 1052 aaPredicted RBP6.31□□□□□ -1.4
VPS4B-205ENST00000591383 B4DGG1 531 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 GOLGA8KD6RF30 607 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 GOLGA8TH3BQL2 631 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 TOR1BO14657 336 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 YKT6O15498 198 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 VAPBO95292 243 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 SLU7O95391 586 aaKnown RBP6.31□□□□□ -1.4
VPS4B-205ENST00000591383 SCG5P05408 212 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 POLBP06746 335 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 SNRPB2P08579 225 aaKnown RBP6.31□□□□□ -1.4
VPS4B-205ENST00000591383 F7P08709 466 aaPredicted RBP6.31□□□□□ -1.4
VPS4B-205ENST00000591383 RALBP11234 206 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 ACP5P13686 325 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 CTSEP14091 401 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 MSH3P20585 1137 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 ACRV1P26436 265 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 TEAD1P28347 426 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 FOXN2P32314 431 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 ELK3P41970 407 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 HNRNPKP61978 463 aaKnown RBP eCLIP6.31□□□□□ -1.4
VPS4B-205ENST00000591383 CAV1Q03135 178 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 CYP4F3Q08477 520 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 EIF2B5Q13144 721 aaKnown RBP6.31□□□□□ -1.4
VPS4B-205ENST00000591383 MSLNQ13421 630 aaPredicted RBP6.31□□□□□ -1.4
VPS4B-205ENST00000591383 C1orf61Q13536 156 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 PEX6Q13608 980 aa6.31□□□□□ -1.4
VPS4B-205ENST00000591383 THOC5Q13769 683 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms