RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 EBLN1P0CF75 366 aa11.9□□□□□ -0.5
VAT1-206ENST00000589709 PSMA3P25788 255 aa11.9□□□□□ -0.5
VAT1-206ENST00000589709 CD151P48509 253 aa11.9□□□□□ -0.5
VAT1-206ENST00000589709 TMPRSS15P98073 1019 aa11.9□□□□□ -0.5
VAT1-206ENST00000589709 GSTM4Q03013 218 aa11.9□□□□□ -0.5
VAT1-206ENST00000589709 KLF1Q13351 362 aaPredicted RBP11.9□□□□□ -0.5
VAT1-206ENST00000589709 ERV3-1Q14264 604 aa11.9□□□□□ -0.5
VAT1-206ENST00000589709 SPARCL1Q14515 664 aa11.9□□□□□ -0.5
VAT1-206ENST00000589709 ZNF658BQ4V348 819 aaPredicted RBP11.9□□□□□ -0.5
VAT1-206ENST00000589709 TMTC4Q5T4D3 741 aa11.9□□□□□ -0.5
VAT1-206ENST00000589709 AADACL2Q6P093 401 aa11.9□□□□□ -0.5
VAT1-206ENST00000589709 DUS1LQ6P1R4 473 aaKnown RBP11.9□□□□□ -0.5
VAT1-206ENST00000589709 ARHGEF18Q6ZSZ5 1173 aa11.9□□□□□ -0.5
VAT1-206ENST00000589709 PEX26Q7Z412 305 aa11.9□□□□□ -0.5
VAT1-206ENST00000589709 SYCE1Q8N0S2 351 aa11.9□□□□□ -0.5
VAT1-206ENST00000589709 TXLNBQ8N3L3 684 aa11.9□□□□□ -0.5
VAT1-206ENST00000589709 UBL4BQ8N7F7 174 aa11.9□□□□□ -0.5
VAT1-206ENST00000589709 ACRBPQ8NEB7 543 aa11.9□□□□□ -0.5
VAT1-206ENST00000589709 ACVR1CQ8NER5 493 aa11.9□□□□□ -0.5
VAT1-206ENST00000589709 CT55Q8WUE5 264 aa11.9□□□□□ -0.5
VAT1-206ENST00000589709 ZNF106Q9H2Y7 1883 aaKnown RBP11.9□□□□□ -0.5
VAT1-206ENST00000589709 FAM96AQ9H5X1 160 aa11.9□□□□□ -0.5
VAT1-206ENST00000589709 LRRC40Q9H9A6 602 aa11.9□□□□□ -0.5
VAT1-206ENST00000589709 SYTL2Q9HCH5 934 aa11.9□□□□□ -0.5
VAT1-206ENST00000589709 ZNF71Q9NQZ8 489 aaPredicted RBP11.9□□□□□ -0.5
VAT1-206ENST00000589709 LATS2Q9NRM7 1088 aa11.9□□□□□ -0.5
VAT1-206ENST00000589709 C1GALT1Q9NS00 363 aa11.9□□□□□ -0.5
VAT1-206ENST00000589709 KCND1Q9NSA2 647 aa11.9□□□□□ -0.5
VAT1-206ENST00000589709 NLE1Q9NVX2 485 aaPredicted RBP11.9□□□□□ -0.5
VAT1-206ENST00000589709 PIPSLA2A3N6 862 aa11.89□□□□□ -0.51
VAT1-206ENST00000589709 PSMD3O43242 534 aa11.89□□□□□ -0.51
VAT1-206ENST00000589709 METTL18O95568 372 aa11.89□□□□□ -0.51
VAT1-206ENST00000589709 NTRK1P04629 796 aa11.89□□□□□ -0.51
VAT1-206ENST00000589709 FURINP09958 794 aa11.89□□□□□ -0.51
VAT1-206ENST00000589709 MSL3P1P0C860 447 aa11.89□□□□□ -0.51
VAT1-206ENST00000589709 ACRV1P26436 265 aa11.89□□□□□ -0.51
VAT1-206ENST00000589709 MC4RP32245 332 aa11.89□□□□□ -0.51
VAT1-206ENST00000589709 KPNA2P52292 529 aaKnown RBP11.89□□□□□ -0.51
VAT1-206ENST00000589709 KIF5AQ12840 1032 aa11.89□□□□□ -0.51
VAT1-206ENST00000589709 PRKAA1Q13131 559 aa11.89□□□□□ -0.51
VAT1-206ENST00000589709 RPA4Q13156 261 aa11.89□□□□□ -0.51
VAT1-206ENST00000589709 KRT33BQ14525 404 aa11.89□□□□□ -0.51
VAT1-206ENST00000589709 SKIDA1Q1XH10 827 aa11.89□□□□□ -0.51
VAT1-206ENST00000589709 P3H1Q32P28 736 aa11.89□□□□□ -0.51
VAT1-206ENST00000589709 LACTB2Q53H82 288 aaPredicted RBP11.89□□□□□ -0.51
VAT1-206ENST00000589709 TCTN3Q6NUS6 607 aa11.89□□□□□ -0.51
VAT1-206ENST00000589709 CERS6Q6ZMG9 384 aa11.89□□□□□ -0.51
VAT1-206ENST00000589709 ZNF517Q6ZMY9 492 aaPredicted RBP11.89□□□□□ -0.51
VAT1-206ENST00000589709 KIAA1328Q86T90 577 aa11.89□□□□□ -0.51
VAT1-206ENST00000589709 SERPINA9Q86WD7 417 aa11.89□□□□□ -0.51
VAT1-206ENST00000589709 APLFQ8IW19 511 aaPredicted RBP11.89□□□□□ -0.51
VAT1-206ENST00000589709 LILRA3Q8N6C8 439 aaPredicted RBP11.89□□□□□ -0.51
VAT1-206ENST00000589709 FAM71DQ8N9W8 422 aa11.89□□□□□ -0.51
VAT1-206ENST00000589709 OR4E2Q8NGC2 313 aa11.89□□□□□ -0.51
VAT1-206ENST00000589709 SLC35B2Q8TB61 432 aa11.89□□□□□ -0.51
VAT1-206ENST00000589709 NAT14Q8WUY8 206 aa11.89□□□□□ -0.51
VAT1-206ENST00000589709 UBE2Q2Q8WVN8 375 aa11.89□□□□□ -0.51
VAT1-206ENST00000589709 LCN9Q8WX39 176 aa11.89□□□□□ -0.51
VAT1-206ENST00000589709 ZNF501Q96CX3 271 aaPredicted RBP11.89□□□□□ -0.51
VAT1-206ENST00000589709 CDKN2AIPNLQ96HQ2 116 aa11.89□□□□□ -0.51
VAT1-206ENST00000589709 DNAJC1Q96KC8 554 aaKnown RBP11.89□□□□□ -0.51
VAT1-206ENST00000589709 LRFN5Q96NI6 719 aa11.89□□□□□ -0.51
VAT1-206ENST00000589709 BAG1Q99933 345 aaPredicted RBP11.89□□□□□ -0.51
VAT1-206ENST00000589709 EPN3Q9H201 632 aa11.89□□□□□ -0.51
VAT1-206ENST00000589709 OR52A5Q9H2C5 316 aa11.89□□□□□ -0.51
VAT1-206ENST00000589709 TFB2MQ9H5Q4 396 aaKnown RBP11.89□□□□□ -0.51
VAT1-206ENST00000589709 MVB12BQ9H7P6 319 aa11.89□□□□□ -0.51
VAT1-206ENST00000589709 COG4Q9H9E3 785 aa11.89□□□□□ -0.51
VAT1-206ENST00000589709 VPS37BQ9H9H4 285 aa11.89□□□□□ -0.51
VAT1-206ENST00000589709 FAM8A1Q9UBU6 413 aa11.89□□□□□ -0.51
VAT1-206ENST00000589709 POMT2Q9UKY4 750 aa11.89□□□□□ -0.51
VAT1-206ENST00000589709 MROH6A6NGR9 719 aa11.88□□□□□ -0.51
VAT1-206ENST00000589709 MKRN2OSH3BPM6 223 aa11.88□□□□□ -0.51
VAT1-206ENST00000589709 IFRD1O00458 451 aaPredicted RBP11.88□□□□□ -0.51
VAT1-206ENST00000589709 CCL22O00626 93 aa11.88□□□□□ -0.51
VAT1-206ENST00000589709 DDX3YO15523 660 aaKnown RBP11.88□□□□□ -0.51
VAT1-206ENST00000589709 CPNE3O75131 537 aaKnown RBP11.88□□□□□ -0.51
VAT1-206ENST00000589709 SCRG1O75711 98 aa11.88□□□□□ -0.51
VAT1-206ENST00000589709 AP2A2O94973 939 aa11.88□□□□□ -0.51
VAT1-206ENST00000589709 AP2A1O95782 977 aa11.88□□□□□ -0.51
VAT1-206ENST00000589709 PTMAP06454 111 aaKnown RBP11.88□□□□□ -0.51
VAT1-206ENST00000589709 POLR2CP19387 275 aaPredicted RBP11.88□□□□□ -0.51
VAT1-206ENST00000589709 PTPN4P29074 926 aa11.88□□□□□ -0.51
VAT1-206ENST00000589709 CDKN1CP49918 316 aaPredicted RBP11.88□□□□□ -0.51
VAT1-206ENST00000589709 PMS2P54278 862 aa11.88□□□□□ -0.51
VAT1-206ENST00000589709 RPS15P62841 145 aaKnown RBP11.88□□□□□ -0.51
VAT1-206ENST00000589709 CACNG1Q06432 222 aa11.88□□□□□ -0.51
VAT1-206ENST00000589709 ZRANB3Q5FWF4 1079 aa11.88□□□□□ -0.51
VAT1-206ENST00000589709 ZNF449Q6P9G9 518 aa11.88□□□□□ -0.51
VAT1-206ENST00000589709 SYVN1Q86TM6 617 aa11.88□□□□□ -0.51
VAT1-206ENST00000589709 TMEM139Q8IV31 216 aa11.88□□□□□ -0.51
VAT1-206ENST00000589709 STYXQ8WUJ0 223 aa11.88□□□□□ -0.51
VAT1-206ENST00000589709 THAP4Q8WY91 577 aa11.88□□□□□ -0.51
VAT1-206ENST00000589709 RNF31Q96EP0 1072 aa11.88□□□□□ -0.51
VAT1-206ENST00000589709 FERD3LQ96RJ6 166 aa11.88□□□□□ -0.51
VAT1-206ENST00000589709 PITPNM3Q9BZ71 974 aa11.88□□□□□ -0.51
VAT1-206ENST00000589709 TWSG1Q9GZX9 223 aa11.88□□□□□ -0.51
VAT1-206ENST00000589709 SRMSQ9H3Y6 488 aa11.88□□□□□ -0.51
VAT1-206ENST00000589709 ACTL8Q9H568 366 aa11.88□□□□□ -0.51
VAT1-206ENST00000589709 AKIRIN1Q9H9L7 192 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms