RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 CFAP99D6REC4 459 aa18.27■□□□□ 0.52
DDX39A-206ENST00000587730 AOC2O75106 756 aa18.27■□□□□ 0.52
DDX39A-206ENST00000587730 MT-ND1P03886 318 aa18.27■□□□□ 0.52
DDX39A-206ENST00000587730 RHOCP08134 193 aa18.27■□□□□ 0.52
DDX39A-206ENST00000587730 CCDC159P0C7I6 412 aa18.27■□□□□ 0.52
DDX39A-206ENST00000587730 MATN1P21941 496 aa18.27■□□□□ 0.52
DDX39A-206ENST00000587730 ELK4P28324 431 aa18.27■□□□□ 0.52
DDX39A-206ENST00000587730 SHMT2P34897 504 aa18.27■□□□□ 0.52
DDX39A-206ENST00000587730 RYKP34925 604 aa18.27■□□□□ 0.52
DDX39A-206ENST00000587730 NRIP1P48552 1158 aa18.27■□□□□ 0.52
DDX39A-206ENST00000587730 BMXP51813 675 aa18.27■□□□□ 0.52
DDX39A-206ENST00000587730 GSTM4Q03013 218 aa18.27■□□□□ 0.52
DDX39A-206ENST00000587730 OCA2Q04671 838 aa18.27■□□□□ 0.52
DDX39A-206ENST00000587730 BNIP3Q12983 259 aa18.27■□□□□ 0.52
DDX39A-206ENST00000587730 ZNF177Q13360 481 aaPredicted RBP18.27■□□□□ 0.52
DDX39A-206ENST00000587730 PYCR3Q53H96 274 aa18.27■□□□□ 0.52
DDX39A-206ENST00000587730 LYPLAL1Q5VWZ2 237 aa18.27■□□□□ 0.52
DDX39A-206ENST00000587730 NIPAL1Q6NVV3 410 aa18.27■□□□□ 0.52
DDX39A-206ENST00000587730 ITIH5Q86UX2 942 aa18.27■□□□□ 0.52
DDX39A-206ENST00000587730 ZNF280BQ86YH2 543 aa18.27■□□□□ 0.52
DDX39A-206ENST00000587730 ZCCHC7Q8N3Z6 543 aaKnown RBP18.27■□□□□ 0.52
DDX39A-206ENST00000587730 MINDY2Q8NBR6 621 aa18.27■□□□□ 0.52
DDX39A-206ENST00000587730 ATAD1Q8NBU5 361 aa18.27■□□□□ 0.52
DDX39A-206ENST00000587730 SETD9Q8NE22 299 aa18.27■□□□□ 0.52
DDX39A-206ENST00000587730 OR7D4Q8NG98 312 aa18.27■□□□□ 0.52
DDX39A-206ENST00000587730 OR4F6Q8NGB9 312 aa18.27■□□□□ 0.52
DDX39A-206ENST00000587730 UBTD2Q8WUN7 234 aa18.27■□□□□ 0.52
DDX39A-206ENST00000587730 OVCA2Q8WZ82 227 aa18.27■□□□□ 0.52
DDX39A-206ENST00000587730 ZNF566Q969W8 418 aa18.27■□□□□ 0.52
DDX39A-206ENST00000587730 PLD4Q96BZ4 506 aa18.27■□□□□ 0.52
DDX39A-206ENST00000587730 NSMCE3Q96MG7 304 aa18.27■□□□□ 0.52
DDX39A-206ENST00000587730 TTLL2Q9BWV7 592 aa18.27■□□□□ 0.52
DDX39A-206ENST00000587730 NACA2Q9H009 215 aa18.27■□□□□ 0.52
DDX39A-206ENST00000587730 IPPKQ9H8X2 491 aa18.27■□□□□ 0.52
DDX39A-206ENST00000587730 ACTR8Q9H981 624 aa18.27■□□□□ 0.52
DDX39A-206ENST00000587730 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.27■□□□□ 0.52
DDX39A-206ENST00000587730 ADGRE2Q9UHX3 823 aa18.27■□□□□ 0.52
DDX39A-206ENST00000587730 NAALAD2Q9Y3Q0 740 aa18.27■□□□□ 0.52
DDX39A-206ENST00000587730 OARD1Q9Y530 152 aa18.27■□□□□ 0.52
DDX39A-206ENST00000587730 V9GYQ6 96 aa18.27■□□□□ 0.52
DDX39A-206ENST00000587730 FAM220BPB1ANY3 271 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 OR7A17O14581 309 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 MAGEB3O15480 346 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 FFAR2O15552 330 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 ERN1O75460 977 aaKnown RBP18.26■□□□□ 0.51
DDX39A-206ENST00000587730 RSL1D1O76021 490 aaKnown RBP18.26■□□□□ 0.51
DDX39A-206ENST00000587730 ZNF7P17097 686 aaPredicted RBP18.26■□□□□ 0.51
DDX39A-206ENST00000587730 ATP5C1P36542 298 aaKnown RBP18.26■□□□□ 0.51
DDX39A-206ENST00000587730 HNRNPFP52597 415 aaKnown RBP18.26■□□□□ 0.51
DDX39A-206ENST00000587730 FAM189BP81408 668 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 ZIK1Q3SY52 487 aaPredicted RBP18.26■□□□□ 0.51
DDX39A-206ENST00000587730 TAS2R42Q7RTR8 314 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 TRIM46Q7Z4K8 759 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 CHDHQ8NE62 594 aaPredicted RBP18.26■□□□□ 0.51
DDX39A-206ENST00000587730 TRPV1Q8NER1 839 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 S100ZQ8WXG8 99 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 FIG4Q92562 907 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 GTF2H4Q92759 462 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 MUL1Q969V5 352 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 TBC1D20Q96BZ9 403 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 CAPNS2Q96L46 248 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 ZNF347Q96SE7 839 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 THUMPD3Q9BV44 507 aaKnown RBP18.26■□□□□ 0.51
DDX39A-206ENST00000587730 FAM126AQ9BYI3 521 aaPredicted RBP18.26■□□□□ 0.51
DDX39A-206ENST00000587730 SLC29A3Q9BZD2 475 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 DPY30Q9C005 99 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 CWH43Q9H720 699 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 LIMD1Q9UGP4 676 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 TRPS1Q9UHF7 1281 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 NOD1Q9Y239 953 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 COQ6Q9Y2Z9 468 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 ANGPTL3Q9Y5C1 460 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 PCDHGB1Q9Y5G3 927 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 ZFP37Q9Y6Q3 630 aaPredicted RBP18.26■□□□□ 0.51
DDX39A-206ENST00000587730 HSPE1-MOB4S4R3N1 261 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 GBF1Q92538 1859 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 H3BNC9 293 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 H7C4K7 107 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 SLC16A6O15403 523 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 MRPS14O60783 128 aaKnown RBP18.26■□□□□ 0.51
DDX39A-206ENST00000587730 SLC2A4P14672 509 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 ZNF182P17025 639 aaPredicted RBP18.26■□□□□ 0.51
DDX39A-206ENST00000587730 DGKAP23743 735 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 GNPDA1P46926 289 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 YAP1P46937 504 aaKnown RBP18.26■□□□□ 0.51
DDX39A-206ENST00000587730 ELAVL2Q12926 359 aaKnown RBP18.26■□□□□ 0.51
DDX39A-206ENST00000587730 TRAF3Q13114 568 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 ZNF846Q147U1 533 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 FBXO48Q5FWF7 155 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 XKR5Q6UX68 686 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 GPR149Q86SP6 731 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 MICU2Q8IYU8 434 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 ZBTB8BQ8NAP8 495 aaPredicted RBP18.26■□□□□ 0.51
DDX39A-206ENST00000587730 KLHDC9Q8NEP7 349 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 SNRNP27Q8WVK2 155 aaKnown RBP18.26■□□□□ 0.51
DDX39A-206ENST00000587730 FAM162AQ96A26 154 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 WDR12Q9GZL7 423 aaKnown RBP18.26■□□□□ 0.51
DDX39A-206ENST00000587730 NAA50Q9GZZ1 169 aaKnown RBP18.26■□□□□ 0.51
DDX39A-206ENST00000587730 LHPPQ9H008 270 aa18.26■□□□□ 0.51
DDX39A-206ENST00000587730 CLPBQ9H078 707 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms