RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 RASGRP3Q8IV61 690 aa17.25■□□□□ 0.35
TPM4-206ENST00000587201 PPHLN1Q8NEY8 458 aaKnown RBP17.25■□□□□ 0.35
TPM4-206ENST00000587201 RNF31Q96EP0 1072 aa17.25■□□□□ 0.35
TPM4-206ENST00000587201 ELMO2Q96JJ3 720 aa17.25■□□□□ 0.35
TPM4-206ENST00000587201 TTC1Q99614 292 aa17.25■□□□□ 0.35
TPM4-206ENST00000587201 MAP3K3Q99759 626 aa17.25■□□□□ 0.35
TPM4-206ENST00000587201 OR52A5Q9H2C5 316 aa17.25■□□□□ 0.35
TPM4-206ENST00000587201 TRIT1Q9H3H1 467 aaKnown RBP17.25■□□□□ 0.35
TPM4-206ENST00000587201 RIMKLBQ9ULI2 386 aa17.25■□□□□ 0.35
TPM4-206ENST00000587201 ATRXP46100 2492 aa17.24■□□□□ 0.35
TPM4-206ENST00000587201 IGHV5-51A0A0C4DH38 117 aa17.24■□□□□ 0.35
TPM4-206ENST00000587201 C1QL1O75973 258 aa17.24■□□□□ 0.35
TPM4-206ENST00000587201 DLGAP3O95886 979 aa17.24■□□□□ 0.35
TPM4-206ENST00000587201 PREPP48147 710 aa17.24■□□□□ 0.35
TPM4-206ENST00000587201 ARCN1P48444 511 aaKnown RBP17.24■□□□□ 0.35
TPM4-206ENST00000587201 CD151P48509 253 aa17.24■□□□□ 0.35
TPM4-206ENST00000587201 ARL4DP49703 201 aa17.24■□□□□ 0.35
TPM4-206ENST00000587201 SESN2P58004 480 aaPredicted RBP17.24■□□□□ 0.35
TPM4-206ENST00000587201 CYP4F2P78329 520 aa17.24■□□□□ 0.35
TPM4-206ENST00000587201 PRAMEP78395 509 aa17.24■□□□□ 0.35
TPM4-206ENST00000587201 PRKAA1Q13131 559 aa17.24■□□□□ 0.35
TPM4-206ENST00000587201 RPA4Q13156 261 aa17.24■□□□□ 0.35
TPM4-206ENST00000587201 ZNF658BQ4V348 819 aaPredicted RBP17.24■□□□□ 0.35
TPM4-206ENST00000587201 LYPLAL1Q5VWZ2 237 aa17.24■□□□□ 0.35
TPM4-206ENST00000587201 CYB5D1Q6P9G0 228 aa17.24■□□□□ 0.35
TPM4-206ENST00000587201 PACS1Q6VY07 963 aa17.24■□□□□ 0.35
TPM4-206ENST00000587201 SIDT2Q8NBJ9 832 aaKnown RBP17.24■□□□□ 0.35
TPM4-206ENST00000587201 ACVR1CQ8NER5 493 aa17.24■□□□□ 0.35
TPM4-206ENST00000587201 OR4E2Q8NGC2 313 aa17.24■□□□□ 0.35
TPM4-206ENST00000587201 OR6P1Q8NGX9 317 aa17.24■□□□□ 0.35
TPM4-206ENST00000587201 EXTL1Q92935 676 aa17.24■□□□□ 0.35
TPM4-206ENST00000587201 KIAA1143Q96AT1 154 aaPredicted RBP17.24■□□□□ 0.35
TPM4-206ENST00000587201 SLC41A2Q96JW4 573 aa17.24■□□□□ 0.35
TPM4-206ENST00000587201 ZNF778Q96MU6 729 aa17.24■□□□□ 0.35
TPM4-206ENST00000587201 CD180Q99467 661 aa17.24■□□□□ 0.35
TPM4-206ENST00000587201 ARHGAP9Q9BRR9 750 aa17.24■□□□□ 0.35
TPM4-206ENST00000587201 ULBP3Q9BZM4 244 aa17.24■□□□□ 0.35
TPM4-206ENST00000587201 GPN2Q9H9Y4 310 aaPredicted RBP17.24■□□□□ 0.35
TPM4-206ENST00000587201 EIF2B3Q9NR50 452 aaKnown RBP17.24■□□□□ 0.35
TPM4-206ENST00000587201 HOMER3Q9NSC5 361 aa17.24■□□□□ 0.35
TPM4-206ENST00000587201 SEMA5BQ9P283 1151 aa17.24■□□□□ 0.35
TPM4-206ENST00000587201 TCAF1Q9Y4C2 921 aa17.24■□□□□ 0.35
TPM4-206ENST00000587201 LOC101059948A0A1B0GTJ6 334 aa17.23■□□□□ 0.35
TPM4-206ENST00000587201 TLCD2A6NGC4 264 aa17.23■□□□□ 0.35
TPM4-206ENST00000587201 FTH1P02794 183 aa17.23■□□□□ 0.35
TPM4-206ENST00000587201 ITGB2P05107 769 aa17.23■□□□□ 0.35
TPM4-206ENST00000587201 OR56A5P0C7T3 313 aa17.23■□□□□ 0.35
TPM4-206ENST00000587201 ZNF28P17035 718 aa17.23■□□□□ 0.35
TPM4-206ENST00000587201 POLR2CP19387 275 aaPredicted RBP17.23■□□□□ 0.35
TPM4-206ENST00000587201 ABHD18Q0P651 414 aa17.23■□□□□ 0.35
TPM4-206ENST00000587201 FASTKD1Q53R41 847 aaKnown RBP17.23■□□□□ 0.35
TPM4-206ENST00000587201 PCID2Q5JVF3 399 aa17.23■□□□□ 0.35
TPM4-206ENST00000587201 PPP1R3BQ86XI6 285 aa17.23■□□□□ 0.35
TPM4-206ENST00000587201 UNC5BQ8IZJ1 945 aa17.23■□□□□ 0.35
TPM4-206ENST00000587201 ESX1Q8N693 406 aa17.23■□□□□ 0.35
TPM4-206ENST00000587201 PHC3Q8NDX5 983 aa17.23■□□□□ 0.35
TPM4-206ENST00000587201 OR4L1Q8NH43 312 aa17.23■□□□□ 0.35
TPM4-206ENST00000587201 LCN9Q8WX39 176 aa17.23■□□□□ 0.35
TPM4-206ENST00000587201 ELMO1Q92556 727 aa17.23■□□□□ 0.35
TPM4-206ENST00000587201 EFHD1Q9BUP0 239 aa17.23■□□□□ 0.35
TPM4-206ENST00000587201 SLC12A9Q9BXP2 914 aa17.23■□□□□ 0.35
TPM4-206ENST00000587201 SEMA4CQ9C0C4 833 aa17.23■□□□□ 0.35
TPM4-206ENST00000587201 GRPEL1Q9HAV7 217 aa17.23■□□□□ 0.35
TPM4-206ENST00000587201 PDE7BQ9NP56 450 aa17.23■□□□□ 0.35
TPM4-206ENST00000587201 ANAPC5Q9UJX4 755 aa17.23■□□□□ 0.35
TPM4-206ENST00000587201 LIN7AO14910 233 aaPredicted RBP17.22■□□□□ 0.35
TPM4-206ENST00000587201 OR1I1O60431 355 aa17.22■□□□□ 0.35
TPM4-206ENST00000587201 SPAG6O75602 509 aa17.22■□□□□ 0.35
TPM4-206ENST00000587201 KIAA0754O94854 1291 aa17.22■□□□□ 0.35
TPM4-206ENST00000587201 FGF5P12034 268 aa17.22■□□□□ 0.35
TPM4-206ENST00000587201 FOLR1P15328 257 aa17.22■□□□□ 0.35
TPM4-206ENST00000587201 PPARGP37231 505 aaPredicted RBP17.22■□□□□ 0.35
TPM4-206ENST00000587201 ACY1Q03154 408 aa17.22■□□□□ 0.35
TPM4-206ENST00000587201 ACVR1Q04771 509 aa17.22■□□□□ 0.35
TPM4-206ENST00000587201 TUBB3Q13509 450 aa17.22■□□□□ 0.35
TPM4-206ENST00000587201 MAP7Q14244 749 aa17.22■□□□□ 0.35
TPM4-206ENST00000587201 KCNAB1Q14722 419 aa17.22■□□□□ 0.35
TPM4-206ENST00000587201 BRD3Q15059 726 aa17.22■□□□□ 0.35
TPM4-206ENST00000587201 LINC00303Q3SY05 128 aa17.22■□□□□ 0.35
TPM4-206ENST00000587201 C6orf15Q6UXA7 325 aaPredicted RBP17.22■□□□□ 0.35
TPM4-206ENST00000587201 CERS6Q6ZMG9 384 aa17.22■□□□□ 0.35
TPM4-206ENST00000587201 KMT5CQ86Y97 462 aa17.22■□□□□ 0.35
TPM4-206ENST00000587201 ZNF843Q8N446 348 aa17.22■□□□□ 0.35
TPM4-206ENST00000587201 TFGQ92734 400 aaPredicted RBP17.22■□□□□ 0.35
TPM4-206ENST00000587201 PEX13Q92968 403 aa17.22■□□□□ 0.35
TPM4-206ENST00000587201 SRMSQ9H3Y6 488 aa17.22■□□□□ 0.35
TPM4-206ENST00000587201 MVB12BQ9H7P6 319 aa17.22■□□□□ 0.35
TPM4-206ENST00000587201 CHRAC1Q9NRG0 131 aa17.22■□□□□ 0.35
TPM4-206ENST00000587201 LNPEPQ9UIQ6 1025 aa17.22■□□□□ 0.35
TPM4-206ENST00000587201 RARRES3Q9UL19 164 aa17.22■□□□□ 0.35
TPM4-206ENST00000587201 ZNF891A8MT65 544 aaPredicted RBP17.21■□□□□ 0.35
TPM4-206ENST00000587201 F8W8V4 182 aa17.21■□□□□ 0.35
TPM4-206ENST00000587201 AP3B1O00203 1094 aa17.21■□□□□ 0.35
TPM4-206ENST00000587201 MATN2O00339 956 aa17.21■□□□□ 0.35
TPM4-206ENST00000587201 EBLN1P0CF75 366 aa17.21■□□□□ 0.35
TPM4-206ENST00000587201 KPNA2P52292 529 aaKnown RBP17.21■□□□□ 0.35
TPM4-206ENST00000587201 TERF1P54274 439 aa17.21■□□□□ 0.35
TPM4-206ENST00000587201 HSD11B2P80365 405 aa17.21■□□□□ 0.35
TPM4-206ENST00000587201 BOP1Q14137 746 aaKnown RBP17.21■□□□□ 0.35
TPM4-206ENST00000587201 TBR1Q16650 682 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms