RNA–Protein interactions for RNA: ENST00000585941.5

LIG3-205, Transcript of DNA ligase 3, humanhuman

TSL 1 (best)

Gene LIG3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-205ENST00000585941 SLCO2B1O94956 709 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 PSMG1O95456 288 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 GSTM1P09488 218 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 LAMP2P13473 410 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 HGFP14210 728 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 EPB42P16452 691 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 GPX3P22352 226 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 MTHFRP42898 656 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 PRLHRP49683 370 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 CCR3P51677 355 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 ERVPABLB-1P60509 514 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 GSTM4Q03013 218 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 DPTQ07507 201 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 BOP1Q14137 746 aaKnown RBP13.91□□□□□ -0.18
LIG3-205ENST00000585941 GRM2Q14416 872 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 RPS6KA2Q15349 733 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 KIF19Q2TAC6 998 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 MMEL1Q495T6 779 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 AAGABQ6PD74 315 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 HACD2Q6Y1H2 254 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 BNC2Q6ZN30 1099 aaPredicted RBP13.91□□□□□ -0.18
LIG3-205ENST00000585941 RIPOR1Q6ZS17 1223 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 LRRC70Q7Z2Q7 622 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 MILR1Q7Z6M3 343 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 CDYL2Q8N8U2 506 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 MCOLN3Q8TDD5 553 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 NAT14Q8WUY8 206 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 DLG3Q92796 817 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 ESAMQ96AP7 390 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 NUS1Q96E22 293 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 CLPTM1LQ96KA5 538 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 NTMT1Q9BV86 223 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 TRMT61BQ9BVS5 477 aaKnown RBP13.91□□□□□ -0.18
LIG3-205ENST00000585941 WDR41Q9HAD4 459 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 SDR39U1Q9NRG7 319 aaPredicted RBP13.91□□□□□ -0.18
LIG3-205ENST00000585941 STOML1Q9UBI4 398 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 BTRCQ9Y297 605 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 ASB1Q9Y576 335 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 TIMM22Q9Y584 194 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 ST14Q9Y5Y6 855 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 A0A1B0GTL3 188 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 SPINT1O43278 529 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 SGTAO43765 313 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 WDR47O94967 919 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 ALDOCP09972 364 aaKnown RBP13.91□□□□□ -0.18
LIG3-205ENST00000585941 EBLN1P0CF75 366 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 PRDX3P30048 256 aaKnown RBP13.91□□□□□ -0.18
LIG3-205ENST00000585941 HMOX2P30519 316 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 GDI1P31150 447 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 ARL1P40616 181 aaPredicted RBP13.91□□□□□ -0.18
LIG3-205ENST00000585941 TRAF3Q13114 568 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 LETMD1Q6P1Q0 360 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 MTSS1LQ765P7 747 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 PCYOX1LQ8NBM8 494 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 OR4F6Q8NGB9 312 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 OR52B6Q8NGF0 335 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 SKA2Q8WVK7 121 aaPredicted RBP13.91□□□□□ -0.18
LIG3-205ENST00000585941 GLMNQ92990 594 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 ZNF514Q96K75 400 aaPredicted RBP13.91□□□□□ -0.18
LIG3-205ENST00000585941 MAGEB10Q96LZ2 347 aaPredicted RBP13.91□□□□□ -0.18
LIG3-205ENST00000585941 ANKRD27Q96NW4 1050 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 TMEM79Q9BSE2 394 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 CCM2Q9BSQ5 444 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 WRAP53Q9BUR4 548 aaKnown RBP13.91□□□□□ -0.18
LIG3-205ENST00000585941 PLA2G2FQ9BZM2 168 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 SLC32A1Q9H598 525 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 PRSS16Q9NQE7 514 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 LMCD1Q9NZU5 365 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 CCDC167Q9P0B6 97 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 STX18Q9P2W9 335 aaKnown RBP13.91□□□□□ -0.18
LIG3-205ENST00000585941 TRPS1Q9UHF7 1281 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 PDE10AQ9Y233 779 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 L3MBTL1Q9Y468 752 aa13.91□□□□□ -0.18
LIG3-205ENST00000585941 LZTS3O60299 673 aaPredicted RBP13.9□□□□□ -0.18
LIG3-205ENST00000585941 RECQL5O94762 991 aaPredicted RBP13.9□□□□□ -0.18
LIG3-205ENST00000585941 EPHX1P07099 455 aa13.9□□□□□ -0.18
LIG3-205ENST00000585941 CAPN1P07384 714 aa13.9□□□□□ -0.18
LIG3-205ENST00000585941 GCKP35557 465 aa13.9□□□□□ -0.18
LIG3-205ENST00000585941 IL12RB1P42701 662 aa13.9□□□□□ -0.18
LIG3-205ENST00000585941 AP2B1P63010 937 aa13.9□□□□□ -0.18
LIG3-205ENST00000585941 ERVK-8P63133 956 aa13.9□□□□□ -0.18
LIG3-205ENST00000585941 TMEM115Q12893 351 aaPredicted RBP13.9□□□□□ -0.18
LIG3-205ENST00000585941 GRB7Q14451 532 aa13.9□□□□□ -0.18
LIG3-205ENST00000585941 CCDC6Q16204 474 aa13.9□□□□□ -0.18
LIG3-205ENST00000585941 SMU1Q2TAY7 513 aa13.9□□□□□ -0.18
LIG3-205ENST00000585941 SYTL3Q4VX76 610 aa13.9□□□□□ -0.18
LIG3-205ENST00000585941 ATP6AP1LQ52LC2 224 aa13.9□□□□□ -0.18
LIG3-205ENST00000585941 COQ5Q5HYK3 327 aa13.9□□□□□ -0.18
LIG3-205ENST00000585941 GK5Q6ZS86 529 aa13.9□□□□□ -0.18
LIG3-205ENST00000585941 RASGRP3Q8IV61 690 aa13.9□□□□□ -0.18
LIG3-205ENST00000585941 HMGCLL1Q8TB92 370 aa13.9□□□□□ -0.18
LIG3-205ENST00000585941 TMEM159Q96B96 161 aa13.9□□□□□ -0.18
LIG3-205ENST00000585941 ROPN1LQ96C74 230 aa13.9□□□□□ -0.18
LIG3-205ENST00000585941 KXD1Q9BQD3 176 aa13.9□□□□□ -0.18
LIG3-205ENST00000585941 SLC29A3Q9BZD2 475 aa13.9□□□□□ -0.18
LIG3-205ENST00000585941 S1PR5Q9H228 398 aa13.9□□□□□ -0.18
LIG3-205ENST00000585941 EBF2Q9HAK2 575 aa13.9□□□□□ -0.18
LIG3-205ENST00000585941 FBRSL1Q9HCM7 1045 aaKnown RBP13.9□□□□□ -0.18
LIG3-205ENST00000585941 ITM2BQ9Y287 266 aa13.9□□□□□ -0.18
LIG3-205ENST00000585941 NDUFAF1Q9Y375 327 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms