RNA–Protein interactions for RNA: ENST00000585058.1

RAB11FIP4-210, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2

Gene RAB11FIP4, Length 5,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-210ENST00000585058 CST3P01034 146 aaPredicted RBP13.09□□□□□ -0.31
RAB11FIP4-210ENST00000585058 PRH1P02810 166 aa13.09□□□□□ -0.31
RAB11FIP4-210ENST00000585058 INHBEP58166 350 aa13.09□□□□□ -0.31
RAB11FIP4-210ENST00000585058 ATXN7L2Q5T6C5 722 aaPredicted RBP13.09□□□□□ -0.31
RAB11FIP4-210ENST00000585058 LINGO2Q7L985 606 aa13.09□□□□□ -0.31
RAB11FIP4-210ENST00000585058 GJD3Q8N144 294 aa13.09□□□□□ -0.31
RAB11FIP4-210ENST00000585058 OR7D4Q8NG98 312 aa13.09□□□□□ -0.31
RAB11FIP4-210ENST00000585058 PIK3R3Q92569 461 aa13.09□□□□□ -0.31
RAB11FIP4-210ENST00000585058 GAL3ST3Q96A11 431 aa13.09□□□□□ -0.31
RAB11FIP4-210ENST00000585058 DKK3Q9UBP4 350 aa13.09□□□□□ -0.31
RAB11FIP4-210ENST00000585058 PEX16Q9Y5Y5 336 aa13.09□□□□□ -0.31
RAB11FIP4-210ENST00000585058 DPPA5A6NC42 116 aa13.08□□□□□ -0.31
RAB11FIP4-210ENST00000585058 CXCR6O00574 342 aa13.08□□□□□ -0.31
RAB11FIP4-210ENST00000585058 CDC40O60508 579 aaKnown RBP eCLIP13.08□□□□□ -0.31
RAB11FIP4-210ENST00000585058 IDH3AP50213 366 aa13.08□□□□□ -0.31
RAB11FIP4-210ENST00000585058 PRR5P85299 388 aa13.08□□□□□ -0.31
RAB11FIP4-210ENST00000585058 CRTC2Q53ET0 693 aaPredicted RBP13.08□□□□□ -0.31
RAB11FIP4-210ENST00000585058 IDNKQ5T6J7 187 aa13.08□□□□□ -0.31
RAB11FIP4-210ENST00000585058 METTL21CQ5VZV1 264 aa13.08□□□□□ -0.31
RAB11FIP4-210ENST00000585058 RBM18Q96H35 190 aaKnown RBP13.08□□□□□ -0.31
RAB11FIP4-210ENST00000585058 DMRTB1Q96MA1 342 aa13.08□□□□□ -0.31
RAB11FIP4-210ENST00000585058 TOR3AQ9H497 397 aa13.08□□□□□ -0.31
RAB11FIP4-210ENST00000585058 SNX10Q9Y5X0 201 aa13.08□□□□□ -0.31
RAB11FIP4-210ENST00000585058 SMIM35A0A1B0GVV1 85 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 TOR1BO14657 336 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 FGF19O95750 216 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 MT-CYBP00156 380 aaPredicted RBP13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 SLC35G6P0C7Q6 338 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 TREML2Q5T2D2 321 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 GALNT7Q86SF2 657 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 ZDHHC21Q8IVQ6 265 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 SVOPLQ8N434 492 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 POF1BQ8WVV4 589 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 ZFP3Q96NJ6 502 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 MGME1Q9BQP7 344 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 TVP23BQ9NYZ1 205 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 TBC1D14Q9P2M4 693 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 UBR1Q8IWV7 1749 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 ZNF208O43345 1280 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 AHCYP23526 432 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 DDX6P26196 483 aaKnown RBP eCLIP13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 CDKL1Q00532 357 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 SMARCB1Q12824 385 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 SATL1Q86VE3 508 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 RASSF5Q8WWW0 418 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 ESAMQ96AP7 390 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 ROBO3Q96MS0 1386 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 LRRC72A6NJI9 287 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 DNAJA2O60884 412 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 GADD45GO95257 159 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 NRSN1Q8IZ57 195 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 CERS5Q8N5B7 392 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 LCN9Q8WX39 176 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 SDCBP2Q9H190 292 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 TLE6Q9H808 572 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 GATBO75879 557 aaKnown RBP13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 C4BPAP04003 597 aaKnown RBP13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 PRNPP04156 253 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 IL12BP29460 328 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 EIF2S3P41091 472 aaKnown RBP13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 MAZP56270 477 aaKnown RBP13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 ADAM8P78325 824 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 VLDLRP98155 873 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 GNA12Q03113 381 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 ADNP2Q6IQ32 1131 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 CPNE9Q8IYJ1 553 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 IFT27Q9BW83 186 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 SLC25A51Q9H1U9 297 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 IL1RAPQ9NPH3 570 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 SNTG1Q9NSN8 517 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 UPB1Q9UBR1 384 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 FKBP7Q9Y680 259 aa13.08□□□□□ -0.32
RAB11FIP4-210ENST00000585058 DCCP43146 1447 aa13.07□□□□□ -0.32
RAB11FIP4-210ENST00000585058 WNT7AO00755 349 aa13.07□□□□□ -0.32
RAB11FIP4-210ENST00000585058 GNB5O14775 395 aa13.07□□□□□ -0.32
RAB11FIP4-210ENST00000585058 KMOO15229 486 aa13.07□□□□□ -0.32
RAB11FIP4-210ENST00000585058 INSIG1O15503 277 aa13.07□□□□□ -0.32
RAB11FIP4-210ENST00000585058 MMP3P08254 477 aa13.07□□□□□ -0.32
RAB11FIP4-210ENST00000585058 S100A1P23297 94 aa13.07□□□□□ -0.32
RAB11FIP4-210ENST00000585058 CCR3P51677 355 aa13.07□□□□□ -0.32
RAB11FIP4-210ENST00000585058 AQP4P55087 323 aa13.07□□□□□ -0.32
RAB11FIP4-210ENST00000585058 KLF1Q13351 362 aaPredicted RBP13.07□□□□□ -0.32
RAB11FIP4-210ENST00000585058 HSDL1Q3SXM5 330 aa13.07□□□□□ -0.32
RAB11FIP4-210ENST00000585058 INTS6LQ5JSJ4 861 aaKnown RBP13.07□□□□□ -0.32
RAB11FIP4-210ENST00000585058 ABHD15Q6UXT9 468 aa13.07□□□□□ -0.32
RAB11FIP4-210ENST00000585058 ADGRG6Q86SQ4 1221 aa13.07□□□□□ -0.32
RAB11FIP4-210ENST00000585058 PRSS58Q8IYP2 241 aa13.07□□□□□ -0.32
RAB11FIP4-210ENST00000585058 GPATCH1Q9BRR8 931 aaKnown RBP13.07□□□□□ -0.32
RAB11FIP4-210ENST00000585058 HIPK3Q9H422 1215 aa13.07□□□□□ -0.32
RAB11FIP4-210ENST00000585058 ARHGEF4Q9NR80 690 aa13.07□□□□□ -0.32
RAB11FIP4-210ENST00000585058 GRIN2DO15399 1336 aa13.07□□□□□ -0.32
RAB11FIP4-210ENST00000585058 PGLSO95336 258 aa13.07□□□□□ -0.32
RAB11FIP4-210ENST00000585058 PRDX6P30041 224 aa13.07□□□□□ -0.32
RAB11FIP4-210ENST00000585058 MTPNP58546 118 aa13.07□□□□□ -0.32
RAB11FIP4-210ENST00000585058 CRY2Q49AN0 593 aa13.07□□□□□ -0.32
RAB11FIP4-210ENST00000585058 ZNF311Q5JNZ3 666 aa13.07□□□□□ -0.32
RAB11FIP4-210ENST00000585058 SLC8B1Q6J4K2 584 aa13.07□□□□□ -0.32
RAB11FIP4-210ENST00000585058 UFD1Q92890 307 aa13.07□□□□□ -0.32
RAB11FIP4-210ENST00000585058 ROPN1LQ96C74 230 aa13.07□□□□□ -0.32
RAB11FIP4-210ENST00000585058 SIPA1Q96FS4 1042 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms