RNA–Protein interactions for RNA: ENST00000584668.5

SRSF1-207, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 758 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-207ENST00000584668 BPIP17213 487 aa8.21□□□□□ -1.1
SRSF1-207ENST00000584668 POLR2CP19387 275 aaPredicted RBP8.21□□□□□ -1.1
SRSF1-207ENST00000584668 MSH3P20585 1137 aa8.21□□□□□ -1.1
SRSF1-207ENST00000584668 ITGAXP20702 1163 aa8.21□□□□□ -1.1
SRSF1-207ENST00000584668 SSTR2P30874 369 aa8.21□□□□□ -1.1
SRSF1-207ENST00000584668 DCDP81605 110 aaKnown RBP8.21□□□□□ -1.1
SRSF1-207ENST00000584668 SLC25A11Q02978 314 aaKnown RBP8.21□□□□□ -1.1
SRSF1-207ENST00000584668 RBPJQ06330 500 aa8.21□□□□□ -1.1
SRSF1-207ENST00000584668 NIPAL4Q0D2K0 466 aa8.21□□□□□ -1.1
SRSF1-207ENST00000584668 PCSK7Q16549 785 aa8.21□□□□□ -1.1
SRSF1-207ENST00000584668 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.21□□□□□ -1.15e-8■■■□□ 14.7
SRSF1-207ENST00000584668 ATP13A5Q4VNC0 1218 aa8.21□□□□□ -1.1
SRSF1-207ENST00000584668 BNC2Q6ZN30 1099 aaPredicted RBP8.21□□□□□ -1.1
SRSF1-207ENST00000584668 C11orf96Q7Z7L8 435 aa8.21□□□□□ -1.1
SRSF1-207ENST00000584668 NT5DC3Q86UY8 548 aa8.21□□□□□ -1.1
SRSF1-207ENST00000584668 ZNF808Q8N4W9 903 aaPredicted RBP8.21□□□□□ -1.1
SRSF1-207ENST00000584668 KCTD6Q8NC69 237 aa8.21□□□□□ -1.1
SRSF1-207ENST00000584668 ACVR1CQ8NER5 493 aa8.21□□□□□ -1.1
SRSF1-207ENST00000584668 DNAJB14Q8TBM8 379 aa8.21□□□□□ -1.1
SRSF1-207ENST00000584668 DTX3LQ8TDB6 740 aa8.21□□□□□ -1.1
SRSF1-207ENST00000584668 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.21□□□□□ -1.1
SRSF1-207ENST00000584668 GRHL3Q8TE85 626 aa8.21□□□□□ -1.1
SRSF1-207ENST00000584668 LCN9Q8WX39 176 aa8.21□□□□□ -1.1
SRSF1-207ENST00000584668 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.21□□□□□ -1.1
SRSF1-207ENST00000584668 PTERQ96BW5 349 aa8.21□□□□□ -1.1
SRSF1-207ENST00000584668 CCM2Q9BSQ5 444 aa8.21□□□□□ -1.1
SRSF1-207ENST00000584668 TRIM7Q9C029 511 aa8.21□□□□□ -1.1
SRSF1-207ENST00000584668 WWP1Q9H0M0 922 aa8.21□□□□□ -1.1
SRSF1-207ENST00000584668 VPS37BQ9H9H4 285 aa8.21□□□□□ -1.1
SRSF1-207ENST00000584668 CHMP5Q9NZZ3 219 aa8.21□□□□□ -1.1
SRSF1-207ENST00000584668 HACD3Q9P035 362 aa8.21□□□□□ -1.1
SRSF1-207ENST00000584668 ANAPC7Q9UJX3 599 aa8.21□□□□□ -1.1
SRSF1-207ENST00000584668 ITGB1BP2Q9UKP3 347 aa8.21□□□□□ -1.1
SRSF1-207ENST00000584668 PKP3Q9Y446 797 aa8.21□□□□□ -1.1
SRSF1-207ENST00000584668 CFAP20Q9Y6A4 193 aaKnown RBP8.21□□□□□ -1.1
SRSF1-207ENST00000584668 MDC1Q14676 2089 aaKnown RBP8.21□□□□□ -1.1
SRSF1-207ENST00000584668 SEC16AO15027 2179 aa8.21□□□□□ -1.1
SRSF1-207ENST00000584668 SETD2Q9BYW2 2564 aaPredicted RBP8.2□□□□□ -1.1
SRSF1-207ENST00000584668 SPTBP11277 2137 aa8.2□□□□□ -1.1
SRSF1-207ENST00000584668 MED13LQ71F56 2210 aa8.2□□□□□ -1.1
SRSF1-207ENST00000584668 GLYATL1P3A0A0U1RQE8 302 aa8.2□□□□□ -1.1
SRSF1-207ENST00000584668 MGAT4DA6NG13 374 aa8.2□□□□□ -1.1
SRSF1-207ENST00000584668 OR2AG2A6NM03 316 aa8.2□□□□□ -1.1
SRSF1-207ENST00000584668 MYO1FO00160 1098 aa8.2□□□□□ -1.1
SRSF1-207ENST00000584668 E2F3O00716 465 aa8.2□□□□□ -1.1
SRSF1-207ENST00000584668 KDM1AO60341 852 aa8.2□□□□□ -1.1
SRSF1-207ENST00000584668 OR2B3O76000 313 aa8.2□□□□□ -1.1
SRSF1-207ENST00000584668 NDST3O95803 873 aa8.2□□□□□ -1.1
SRSF1-207ENST00000584668 CAPN1P07384 714 aa8.2□□□□□ -1.1
SRSF1-207ENST00000584668 UQCRHP07919 91 aa8.2□□□□□ -1.1
SRSF1-207ENST00000584668 PIRTP0C851 137 aa8.2□□□□□ -1.1
SRSF1-207ENST00000584668 MYBL2P10244 700 aa8.2□□□□□ -1.1
SRSF1-207ENST00000584668 CAPN3P20807 821 aa8.2□□□□□ -1.1
SRSF1-207ENST00000584668 HMGCLP35914 325 aa8.2□□□□□ -1.1
SRSF1-207ENST00000584668 GJC1P36383 396 aa8.2□□□□□ -1.1
SRSF1-207ENST00000584668 IFI35P80217 286 aaPredicted RBP8.2□□□□□ -1.1
SRSF1-207ENST00000584668 OTUD4Q01804 1114 aaKnown RBP8.2□□□□□ -1.1
SRSF1-207ENST00000584668 KLHL30Q0D2K2 578 aa8.2□□□□□ -1.1
SRSF1-207ENST00000584668 DPYSL3Q14195 570 aa8.2□□□□□ -1.1
SRSF1-207ENST00000584668 NFE2L1Q14494 772 aa8.2□□□□□ -1.1
SRSF1-207ENST00000584668 ODF2Q5BJF6 829 aa8.2□□□□□ -1.1
SRSF1-207ENST00000584668 CRB2Q5IJ48 1285 aa8.2□□□□□ -1.1
SRSF1-207ENST00000584668 PRAMEF13Q5VWM6 474 aa8.2□□□□□ -1.1
SRSF1-207ENST00000584668 METRNLQ641Q3 311 aa8.2□□□□□ -1.1
SRSF1-207ENST00000584668 LCN10Q6JVE6 187 aa8.2□□□□□ -1.1
SRSF1-207ENST00000584668 TMEM220Q6QAJ8 160 aa8.2□□□□□ -1.1
SRSF1-207ENST00000584668 SARM1Q6SZW1 724 aa8.2□□□□□ -1.1
SRSF1-207ENST00000584668 DDHD1Q8NEL9 900 aa8.2□□□□□ -1.1
SRSF1-207ENST00000584668 OR1L3Q8NH93 324 aa8.2□□□□□ -1.1
SRSF1-207ENST00000584668 DLG3Q92796 817 aa8.2□□□□□ -1.1
SRSF1-207ENST00000584668 INPP5DQ92835 1189 aa8.2□□□□□ -1.1
SRSF1-207ENST00000584668 MAGEB10Q96LZ2 347 aaPredicted RBP8.2□□□□□ -1.1
SRSF1-207ENST00000584668 NDC1Q9BTX1 674 aa8.2□□□□□ -1.1
SRSF1-207ENST00000584668 MRM3Q9HC36 420 aaKnown RBP8.2□□□□□ -1.1
SRSF1-207ENST00000584668 SMOXQ9NWM0 555 aa8.2□□□□□ -1.1
SRSF1-207ENST00000584668 LIMA1Q9UHB6 759 aaKnown RBP8.2□□□□□ -1.1
SRSF1-207ENST00000584668 CDC23Q9UJX2 597 aa8.2□□□□□ -1.1
SRSF1-207ENST00000584668 CCDC88CQ9P219 2028 aa8.19□□□□□ -1.1
SRSF1-207ENST00000584668 ANKRD12Q6UB98 2062 aa8.19□□□□□ -1.1
SRSF1-207ENST00000584668 A0A0A6YYK5 440 aaPredicted RBP8.19□□□□□ -1.1
SRSF1-207ENST00000584668 DYTNA2CJ06 578 aa8.19□□□□□ -1.1
SRSF1-207ENST00000584668 LRRC53A6NM62 1247 aa8.19□□□□□ -1.1
SRSF1-207ENST00000584668 CFAP99D6REC4 459 aa8.19□□□□□ -1.1
SRSF1-207ENST00000584668 KCNK1O00180 336 aa8.19□□□□□ -1.1
SRSF1-207ENST00000584668 ZSCAN9O15535 394 aaPredicted RBP8.19□□□□□ -1.1
SRSF1-207ENST00000584668 JRKO75564 520 aa8.19□□□□□ -1.1
SRSF1-207ENST00000584668 KLF7O75840 302 aaPredicted RBP8.19□□□□□ -1.1
SRSF1-207ENST00000584668 LCA5LO95447 670 aa8.19□□□□□ -1.1
SRSF1-207ENST00000584668 MT-CYBP00156 380 aaPredicted RBP8.19□□□□□ -1.1
SRSF1-207ENST00000584668 MMP2P08253 660 aa8.19□□□□□ -1.1
SRSF1-207ENST00000584668 HTR1EP28566 365 aa8.19□□□□□ -1.1
SRSF1-207ENST00000584668 PRDX3P30048 256 aaKnown RBP8.19□□□□□ -1.1
SRSF1-207ENST00000584668 HNRNPH3P31942 346 aaKnown RBP8.19□□□□□ -1.1
SRSF1-207ENST00000584668 LMAN1P49257 510 aa8.19□□□□□ -1.1
SRSF1-207ENST00000584668 MYL5Q02045 173 aa8.19□□□□□ -1.1
SRSF1-207ENST00000584668 PPIDQ08752 370 aaKnown RBP8.19□□□□□ -1.1
SRSF1-207ENST00000584668 AP1B1Q10567 949 aa8.19□□□□□ -1.1
SRSF1-207ENST00000584668 MMRN1Q13201 1228 aa8.19□□□□□ -1.1
SRSF1-207ENST00000584668 PDK1Q15118 436 aa8.19□□□□□ -1.1
SRSF1-207ENST00000584668 PRKD1Q15139 912 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms