RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 EPB41L1Q9H4G0 881 aa24.25■■□□□ 1.47
TTC39C-209ENST00000584250 VPS37BQ9H9H4 285 aa24.25■■□□□ 1.47
TTC39C-209ENST00000584250 AHCTF1Q8WYP5 2266 aa24.24■■□□□ 1.47
TTC39C-209ENST00000584250 ZCWPW2A0A1B0GU75 182 aa24.24■■□□□ 1.47
TTC39C-209ENST00000584250 FAM237BA0A1B0GVD1 139 aa24.24■■□□□ 1.47
TTC39C-209ENST00000584250 C9orf172C9J069 976 aa24.24■■□□□ 1.47
TTC39C-209ENST00000584250 BHMG1C9JSJ3 638 aaPredicted RBP24.24■■□□□ 1.47
TTC39C-209ENST00000584250 FTH1P02794 183 aa24.24■■□□□ 1.47
TTC39C-209ENST00000584250 PLCL1Q15111 1095 aa24.24■■□□□ 1.47
TTC39C-209ENST00000584250 ZNF789Q5FWF6 425 aa24.24■■□□□ 1.47
TTC39C-209ENST00000584250 TMEM135Q86UB9 458 aa24.24■■□□□ 1.47
TTC39C-209ENST00000584250 VRK3Q8IV63 474 aa24.24■■□□□ 1.47
TTC39C-209ENST00000584250 UNC5BQ8IZJ1 945 aa24.24■■□□□ 1.47
TTC39C-209ENST00000584250 AGBL5Q8NDL9 886 aa24.24■■□□□ 1.47
TTC39C-209ENST00000584250 C9orf72Q96LT7 481 aa24.24■■□□□ 1.47
TTC39C-209ENST00000584250 KRT12Q99456 494 aa24.24■■□□□ 1.47
TTC39C-209ENST00000584250 TTC1Q99614 292 aa24.24■■□□□ 1.47
TTC39C-209ENST00000584250 KIR3DX1Q9H7L2 352 aa24.24■■□□□ 1.47
TTC39C-209ENST00000584250 SAMD15Q9P1V8 674 aa24.24■■□□□ 1.47
TTC39C-209ENST00000584250 MAD1L1Q9Y6D9 718 aa24.24■■□□□ 1.47
TTC39C-209ENST00000584250 RPS6KL1Q9Y6S9 549 aa24.24■■□□□ 1.47
TTC39C-209ENST00000584250 LAMA5O15230 3695 aa24.24■■□□□ 1.47
TTC39C-209ENST00000584250 EFCAB7A8K855 629 aa24.23■■□□□ 1.47
TTC39C-209ENST00000584250 PRMT5O14744 637 aaPredicted RBP24.23■■□□□ 1.47
TTC39C-209ENST00000584250 CSTF2P33240 577 aaKnown RBP eCLIP24.23■■□□□ 1.47
TTC39C-209ENST00000584250 TTPAP49638 278 aa24.23■■□□□ 1.47
TTC39C-209ENST00000584250 PCBP4P57723 403 aaKnown RBP24.23■■□□□ 1.47
TTC39C-209ENST00000584250 RPA4Q13156 261 aa24.23■■□□□ 1.47
TTC39C-209ENST00000584250 DHX34Q14147 1143 aaKnown RBP24.23■■□□□ 1.47
TTC39C-209ENST00000584250 AARS2Q5JTZ9 985 aaKnown RBP24.23■■□□□ 1.47
TTC39C-209ENST00000584250 CTSL3PQ5NE16 218 aa24.23■■□□□ 1.47
TTC39C-209ENST00000584250 FAM92BQ6ZTR7 304 aa24.23■■□□□ 1.47
TTC39C-209ENST00000584250 PDZD3Q86UT5 571 aa24.23■■□□□ 1.47
TTC39C-209ENST00000584250 PLXDC1Q8IUK5 500 aa24.23■■□□□ 1.47
TTC39C-209ENST00000584250 IGDCC3Q8IVU1 814 aa24.23■■□□□ 1.47
TTC39C-209ENST00000584250 BMPERQ8N8U9 685 aa24.23■■□□□ 1.47
TTC39C-209ENST00000584250 ART4Q93070 314 aa24.23■■□□□ 1.47
TTC39C-209ENST00000584250 TMEM159Q96B96 161 aa24.23■■□□□ 1.47
TTC39C-209ENST00000584250 FERD3LQ96RJ6 166 aa24.23■■□□□ 1.47
TTC39C-209ENST00000584250 TRIM31Q9BZY9 425 aa24.23■■□□□ 1.47
TTC39C-209ENST00000584250 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.23■■□□□ 1.47
TTC39C-209ENST00000584250 CDYLQ9Y232 598 aa24.23■■□□□ 1.47
TTC39C-209ENST00000584250 ZFHX4Q86UP3 3567 aa24.22■■□□□ 1.47
TTC39C-209ENST00000584250 ADAMTS20P59510 1910 aa24.22■■□□□ 1.47
TTC39C-209ENST00000584250 CCDC188H7C350 402 aa24.22■■□□□ 1.47
TTC39C-209ENST00000584250 QSOX1O00391 747 aa24.22■■□□□ 1.47
TTC39C-209ENST00000584250 LIN7AO14910 233 aaPredicted RBP24.22■■□□□ 1.47
TTC39C-209ENST00000584250 TP73O15350 636 aa24.22■■□□□ 1.47
TTC39C-209ENST00000584250 NDUFS3O75489 264 aa24.22■■□□□ 1.47
TTC39C-209ENST00000584250 ACADLP28330 430 aa24.22■■□□□ 1.47
TTC39C-209ENST00000584250 PRKG2Q13237 762 aa24.22■■□□□ 1.47
TTC39C-209ENST00000584250 TYSND1Q2T9J0 566 aa24.22■■□□□ 1.47
TTC39C-209ENST00000584250 COL28A1Q2UY09 1125 aa24.22■■□□□ 1.47
TTC39C-209ENST00000584250 IRGCQ6NXR0 463 aa24.22■■□□□ 1.47
TTC39C-209ENST00000584250 CENPUQ71F23 418 aa24.22■■□□□ 1.47
TTC39C-209ENST00000584250 FAM129CQ86XR2 697 aa24.22■■□□□ 1.47
TTC39C-209ENST00000584250 SPACA3Q8IXA5 215 aa24.22■■□□□ 1.47
TTC39C-209ENST00000584250 TFGQ92734 400 aaPredicted RBP24.22■■□□□ 1.47
TTC39C-209ENST00000584250 PPM1MQ96MI6 270 aa24.22■■□□□ 1.47
TTC39C-209ENST00000584250 BIRC8Q96P09 236 aa24.22■■□□□ 1.47
TTC39C-209ENST00000584250 HGH1Q9BTY7 390 aa24.22■■□□□ 1.47
TTC39C-209ENST00000584250 RNF14Q9UBS8 474 aa24.22■■□□□ 1.47
TTC39C-209ENST00000584250 PCDHGA7Q9Y5G6 932 aa24.22■■□□□ 1.47
TTC39C-209ENST00000584250 UBA6A0AVT1 1052 aaPredicted RBP24.21■■□□□ 1.47
TTC39C-209ENST00000584250 GSTM1P09488 218 aa24.21■■□□□ 1.47
TTC39C-209ENST00000584250 MLLT3P42568 568 aaPredicted RBP24.21■■□□□ 1.47
TTC39C-209ENST00000584250 CD151P48509 253 aa24.21■■□□□ 1.47
TTC39C-209ENST00000584250 SEPHS1P49903 392 aa24.21■■□□□ 1.47
TTC39C-209ENST00000584250 EIF3BP55884 814 aaKnown RBP24.21■■□□□ 1.47
TTC39C-209ENST00000584250 GSTM4Q03013 218 aa24.21■■□□□ 1.47
TTC39C-209ENST00000584250 DHX9Q08211 1270 aaKnown RBP24.21■■□□□ 1.47
TTC39C-209ENST00000584250 C2orf54Q08AI8 447 aa24.21■■□□□ 1.47
TTC39C-209ENST00000584250 TGIF1Q15583 401 aa24.21■■□□□ 1.47
TTC39C-209ENST00000584250 NEPROQ6NW34 567 aa24.21■■□□□ 1.47
TTC39C-209ENST00000584250 ZFAND4Q86XD8 727 aa24.21■■□□□ 1.47
TTC39C-209ENST00000584250 DENND6AQ8IWF6 608 aa24.21■■□□□ 1.47
TTC39C-209ENST00000584250 ZNF248Q8NDW4 579 aa24.21■■□□□ 1.47
TTC39C-209ENST00000584250 OR4E2Q8NGC2 313 aa24.21■■□□□ 1.47
TTC39C-209ENST00000584250 OR5AR1Q8NGP9 310 aa24.21■■□□□ 1.47
TTC39C-209ENST00000584250 LPGAT1Q92604 370 aa24.21■■□□□ 1.47
TTC39C-209ENST00000584250 RNF31Q96EP0 1072 aa24.21■■□□□ 1.47
TTC39C-209ENST00000584250 CARD6Q9BX69 1037 aa24.21■■□□□ 1.47
TTC39C-209ENST00000584250 APMAPQ9HDC9 416 aa24.21■■□□□ 1.47
TTC39C-209ENST00000584250 AKAP7Q9P0M2 348 aaPredicted RBP24.21■■□□□ 1.47
TTC39C-209ENST00000584250 RALYQ9UKM9 306 aaKnown RBP24.21■■□□□ 1.47
TTC39C-209ENST00000584250 SDK2Q58EX2 2172 aa24.2■■□□□ 1.47
TTC39C-209ENST00000584250 MAGEB16A2A368 324 aa24.2■■□□□ 1.46
TTC39C-209ENST00000584250 OR6C74A6NCV1 312 aa24.2■■□□□ 1.46
TTC39C-209ENST00000584250 IFRD1O00458 451 aaPredicted RBP24.2■■□□□ 1.46
TTC39C-209ENST00000584250 NVLO15381 856 aaKnown RBP24.2■■□□□ 1.46
TTC39C-209ENST00000584250 TPBGLP0DKB5 382 aa24.2■■□□□ 1.46
TTC39C-209ENST00000584250 FMO4P31512 558 aa24.2■■□□□ 1.46
TTC39C-209ENST00000584250 PPARGP37231 505 aaPredicted RBP24.2■■□□□ 1.46
TTC39C-209ENST00000584250 HSPA14Q0VDF9 509 aa24.2■■□□□ 1.46
TTC39C-209ENST00000584250 KRT33BQ14525 404 aa24.2■■□□□ 1.46
TTC39C-209ENST00000584250 HP1BP3Q5SSJ5 553 aaPredicted RBP24.2■■□□□ 1.46
TTC39C-209ENST00000584250 PTRHD1Q6GMV3 140 aaKnown RBP24.2■■□□□ 1.46
TTC39C-209ENST00000584250 SYDE1Q6ZW31 735 aaPredicted RBP24.2■■□□□ 1.46
TTC39C-209ENST00000584250 HOOK3Q86VS8 718 aa24.2■■□□□ 1.46
TTC39C-209ENST00000584250 SPATA4Q8NEY3 305 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms