RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 ZNF592Q92610 1267 aa24.33■■□□□ 1.49
TSEN54-209ENST00000583454 USP7Q93009 1102 aa24.33■■□□□ 1.49
TSEN54-209ENST00000583454 MED8Q96G25 268 aa24.33■■□□□ 1.49
TSEN54-209ENST00000583454 TRIM56Q9BRZ2 755 aaKnown RBP24.33■■□□□ 1.49
TSEN54-209ENST00000583454 ERP44Q9BS26 406 aa24.33■■□□□ 1.49
TSEN54-209ENST00000583454 ZNF624Q9P2J8 865 aaPredicted RBP24.33■■□□□ 1.49
TSEN54-209ENST00000583454 CPNE7Q9UBL6 633 aa24.33■■□□□ 1.49
TSEN54-209ENST00000583454 ANAPC5Q9UJX4 755 aa24.33■■□□□ 1.49
TSEN54-209ENST00000583454 ACSL5Q9ULC5 683 aa24.33■■□□□ 1.49
TSEN54-209ENST00000583454 IGHV5-10-1A0A0J9YXX1 117 aa24.32■■□□□ 1.48
TSEN54-209ENST00000583454 RAD51CO43502 376 aa24.32■■□□□ 1.48
TSEN54-209ENST00000583454 OR1I1O60431 355 aa24.32■■□□□ 1.48
TSEN54-209ENST00000583454 GSTM1P09488 218 aa24.32■■□□□ 1.48
TSEN54-209ENST00000583454 ALDH4A1P30038 563 aa24.32■■□□□ 1.48
TSEN54-209ENST00000583454 PPARGP37231 505 aaPredicted RBP24.32■■□□□ 1.48
TSEN54-209ENST00000583454 SLC19A1P41440 591 aa24.32■■□□□ 1.48
TSEN54-209ENST00000583454 RPL21P46778 160 aaKnown RBP24.32■■□□□ 1.48
TSEN54-209ENST00000583454 ITGA8P53708 1063 aa24.32■■□□□ 1.48
TSEN54-209ENST00000583454 DRG2P55039 364 aaKnown RBP24.32■■□□□ 1.48
TSEN54-209ENST00000583454 GSTM4Q03013 218 aa24.32■■□□□ 1.48
TSEN54-209ENST00000583454 CLPPQ16740 277 aaPredicted RBP24.32■■□□□ 1.48
TSEN54-209ENST00000583454 USP53Q70EK8 1073 aa24.32■■□□□ 1.48
TSEN54-209ENST00000583454 SLC9B2Q86UD5 537 aa24.32■■□□□ 1.48
TSEN54-209ENST00000583454 AVL9Q8NBF6 648 aa24.32■■□□□ 1.48
TSEN54-209ENST00000583454 GPR150Q8NGU9 434 aa24.32■■□□□ 1.48
TSEN54-209ENST00000583454 CCM2Q9BSQ5 444 aa24.32■■□□□ 1.48
TSEN54-209ENST00000583454 TRIM31Q9BZY9 425 aa24.32■■□□□ 1.48
TSEN54-209ENST00000583454 WDR37Q9Y2I8 494 aa24.32■■□□□ 1.48
TSEN54-209ENST00000583454 RPS6KL1Q9Y6S9 549 aa24.32■■□□□ 1.48
TSEN54-209ENST00000583454 UBR5O95071 2799 aaPredicted RBP24.32■■□□□ 1.48
TSEN54-209ENST00000583454 ZCWPW2A0A1B0GU75 182 aa24.31■■□□□ 1.48
TSEN54-209ENST00000583454 QSOX1O00391 747 aa24.31■■□□□ 1.48
TSEN54-209ENST00000583454 CCL4P13236 92 aa24.31■■□□□ 1.48
TSEN54-209ENST00000583454 PAMP19021 973 aa24.31■■□□□ 1.48
TSEN54-209ENST00000583454 WT1P19544 449 aaPredicted RBP24.31■■□□□ 1.48
TSEN54-209ENST00000583454 PBLDP30039 288 aaPredicted RBP24.31■■□□□ 1.48
TSEN54-209ENST00000583454 CSF2RBP32927 897 aa24.31■■□□□ 1.48
TSEN54-209ENST00000583454 TTPAP49638 278 aa24.31■■□□□ 1.48
TSEN54-209ENST00000583454 MAPK10P53779 464 aa24.31■■□□□ 1.48
TSEN54-209ENST00000583454 HHEXQ03014 270 aa24.31■■□□□ 1.48
TSEN54-209ENST00000583454 BIRC2Q13490 618 aa24.31■■□□□ 1.48
TSEN54-209ENST00000583454 TUBB2AQ13885 445 aa24.31■■□□□ 1.48
TSEN54-209ENST00000583454 CLCA4Q14CN2 919 aa24.31■■□□□ 1.48
TSEN54-209ENST00000583454 SEPT7Q16181 437 aaKnown RBP24.31■■□□□ 1.48
TSEN54-209ENST00000583454 LINC00303Q3SY05 128 aa24.31■■□□□ 1.48
TSEN54-209ENST00000583454 MSS51Q4VC12 460 aa24.31■■□□□ 1.48
TSEN54-209ENST00000583454 LDB1Q86U70 411 aaPredicted RBP24.31■■□□□ 1.48
TSEN54-209ENST00000583454 EXD3Q8N9H8 876 aa24.31■■□□□ 1.48
TSEN54-209ENST00000583454 RCBTB1Q8NDN9 531 aa24.31■■□□□ 1.48
TSEN54-209ENST00000583454 HM13Q8TCT9 377 aa24.31■■□□□ 1.48
TSEN54-209ENST00000583454 PMEPA1Q969W9 287 aa24.31■■□□□ 1.48
TSEN54-209ENST00000583454 STAMBPL1Q96FJ0 436 aa24.31■■□□□ 1.48
TSEN54-209ENST00000583454 TUBB2BQ9BVA1 445 aa24.31■■□□□ 1.48
TSEN54-209ENST00000583454 B3GNT4Q9C0J1 378 aa24.31■■□□□ 1.48
TSEN54-209ENST00000583454 VPS37BQ9H9H4 285 aa24.31■■□□□ 1.48
TSEN54-209ENST00000583454 SNX24Q9Y343 169 aa24.31■■□□□ 1.48
TSEN54-209ENST00000583454 MAD1L1Q9Y6D9 718 aa24.31■■□□□ 1.48
TSEN54-209ENST00000583454 IQCJ-SCHIP1C9J366 451 aaPredicted RBP24.3■■□□□ 1.48
TSEN54-209ENST00000583454 ZW10O43264 779 aa24.3■■□□□ 1.48
TSEN54-209ENST00000583454 USP1O94782 785 aa24.3■■□□□ 1.48
TSEN54-209ENST00000583454 DHX9Q08211 1270 aaKnown RBP24.3■■□□□ 1.48
TSEN54-209ENST00000583454 CBLBQ13191 982 aa24.3■■□□□ 1.48
TSEN54-209ENST00000583454 SQSTM1Q13501 440 aa24.3■■□□□ 1.48
TSEN54-209ENST00000583454 DNAJC21Q5F1R6 531 aaKnown RBP24.3■■□□□ 1.48
TSEN54-209ENST00000583454 DUPD1Q68J44 220 aa24.3■■□□□ 1.48
TSEN54-209ENST00000583454 MRNIPQ6NTE8 343 aa24.3■■□□□ 1.48
TSEN54-209ENST00000583454 VASH2Q86V25 355 aa24.3■■□□□ 1.48
TSEN54-209ENST00000583454 CFAP206Q8IYR0 622 aa24.3■■□□□ 1.48
TSEN54-209ENST00000583454 SH3KBP1Q96B97 665 aa24.3■■□□□ 1.48
TSEN54-209ENST00000583454 ZNF669Q96BR6 464 aaPredicted RBP24.3■■□□□ 1.48
TSEN54-209ENST00000583454 CCDC74BQ96LY2 380 aa24.3■■□□□ 1.48
TSEN54-209ENST00000583454 EBNA1BP2Q99848 306 aaKnown RBP24.3■■□□□ 1.48
TSEN54-209ENST00000583454 UCK1Q9HA47 277 aa24.3■■□□□ 1.48
TSEN54-209ENST00000583454 IGHV1OR21-1A0A087WYE8 117 aa24.29■■□□□ 1.48
TSEN54-209ENST00000583454 B8ZZF3 427 aa24.29■■□□□ 1.48
TSEN54-209ENST00000583454 NDC80O14777 642 aa24.29■■□□□ 1.48
TSEN54-209ENST00000583454 HGSO14964 777 aaPredicted RBP24.29■■□□□ 1.48
TSEN54-209ENST00000583454 HALP42357 657 aa24.29■■□□□ 1.48
TSEN54-209ENST00000583454 LIMK2P53671 638 aa24.29■■□□□ 1.48
TSEN54-209ENST00000583454 NKAIN2Q5VXU1 208 aa24.29■■□□□ 1.48
TSEN54-209ENST00000583454 SDCCAG8Q86SQ7 713 aaPredicted RBP24.29■■□□□ 1.48
TSEN54-209ENST00000583454 PDIK1LQ8N165 341 aa24.29■■□□□ 1.48
TSEN54-209ENST00000583454 LILRA3Q8N6C8 439 aaPredicted RBP24.29■■□□□ 1.48
TSEN54-209ENST00000583454 BBOF1Q8ND07 529 aa24.29■■□□□ 1.48
TSEN54-209ENST00000583454 TCF12Q99081 682 aa24.29■■□□□ 1.48
TSEN54-209ENST00000583454 NAT9Q9BTE0 207 aa24.29■■□□□ 1.48
TSEN54-209ENST00000583454 STN1Q9H668 368 aaKnown RBP24.29■■□□□ 1.48
TSEN54-209ENST00000583454 WHRNQ9P202 907 aa24.29■■□□□ 1.48
TSEN54-209ENST00000583454 MRFAP1Q9Y605 127 aa24.29■■□□□ 1.48
TSEN54-209ENST00000583454 OR52A4PA6NMU1 304 aa24.28■■□□□ 1.48
TSEN54-209ENST00000583454 GOLGA8KD6RF30 607 aa24.28■■□□□ 1.48
TSEN54-209ENST00000583454 GOLGA8TH3BQL2 631 aa24.28■■□□□ 1.48
TSEN54-209ENST00000583454 BANF1O75531 89 aa24.28■■□□□ 1.48
TSEN54-209ENST00000583454 POLBP06746 335 aa24.28■■□□□ 1.48
TSEN54-209ENST00000583454 OR56A5P0C7T3 313 aa24.28■■□□□ 1.48
TSEN54-209ENST00000583454 FGF3P11487 239 aaPredicted RBP24.28■■□□□ 1.48
TSEN54-209ENST00000583454 PGAM1P18669 254 aa24.28■■□□□ 1.48
TSEN54-209ENST00000583454 RPE65Q16518 533 aa24.28■■□□□ 1.48
TSEN54-209ENST00000583454 TYSND1Q2T9J0 566 aa24.28■■□□□ 1.48
TSEN54-209ENST00000583454 NEPROQ6NW34 567 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms