RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-225	ENST00000583438	CYP2R1	Q6VVX0	501 aa		7.76	□□□□□ -1.17
PPP4R1-225	ENST00000583438	ZNF571	Q7Z3V5	609 aa	Predicted RBP	7.76	□□□□□ -1.17
PPP4R1-225	ENST00000583438	POLN	Q7Z5Q5	900 aa		7.76	□□□□□ -1.17
PPP4R1-225	ENST00000583438	FAM114A1	Q8IWE2	563 aa		7.76	□□□□□ -1.17
PPP4R1-225	ENST00000583438	PPIL6	Q8IXY8	311 aa		7.76	□□□□□ -1.17
PPP4R1-225	ENST00000583438	NRSN1	Q8IZ57	195 aa		7.76	□□□□□ -1.17
PPP4R1-225	ENST00000583438	NLGN4X	Q8N0W4	816 aa		7.76	□□□□□ -1.17
PPP4R1-225	ENST00000583438		Q8N3U1	123 aa		7.76	□□□□□ -1.17
PPP4R1-225	ENST00000583438	FAM26E	Q8N5C1	309 aa		7.76	□□□□□ -1.17
PPP4R1-225	ENST00000583438	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	7.76	□□□□□ -1.17
PPP4R1-225	ENST00000583438	ANKS4B	Q8N8V4	417 aa		7.76	□□□□□ -1.17
PPP4R1-225	ENST00000583438	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	7.76	□□□□□ -1.17
PPP4R1-225	ENST00000583438	ATL2	Q8NHH9	583 aa		7.76	□□□□□ -1.17
PPP4R1-225	ENST00000583438	ARRDC2	Q8TBH0	407 aa		7.76	□□□□□ -1.17
PPP4R1-225	ENST00000583438	SCRN2	Q96FV2	425 aa		7.76	□□□□□ -1.17
PPP4R1-225	ENST00000583438	CSPG4P5	Q96PW8	444 aa		7.76	□□□□□ -1.17
PPP4R1-225	ENST00000583438	JMJD8	Q96S16	334 aa		7.76	□□□□□ -1.17
PPP4R1-225	ENST00000583438	RIOK2	Q9BVS4	552 aa	Known RBP	7.76	□□□□□ -1.17
PPP4R1-225	ENST00000583438	GPN2	Q9H9Y4	310 aa	Predicted RBP	7.76	□□□□□ -1.17
PPP4R1-225	ENST00000583438	SEPT11	Q9NVA2	429 aa	Known RBP	7.76	□□□□□ -1.17
PPP4R1-225	ENST00000583438	TMEM51	Q9NW97	253 aa		7.76	□□□□□ -1.17
PPP4R1-225	ENST00000583438	ANAPC2	Q9UJX6	822 aa		7.76	□□□□□ -1.17
PPP4R1-225	ENST00000583438	PDZD2	O15018	2839 aa		7.76	□□□□□ -1.17
PPP4R1-225	ENST00000583438	CREBBP	Q92793	2442 aa		7.76	□□□□□ -1.17
PPP4R1-225	ENST00000583438	ANKRD12	Q6UB98	2062 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	ANKRD17	O75179	2603 aa	Known RBP	7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	OTOG	Q6ZRI0	2925 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438		A0A0J9YYE9	177 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	PSMD11	O00231	422 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	GPR39	O43194	453 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	CLDN7	O95471	211 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	TRBC1	P01850	177 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	HPX	P02790	462 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	SFTPC	P11686	197 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	ACP5	P13686	325 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	TYRP1	P17643	537 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	CSTF2	P33240	577 aa	Known RBP eCLIP	7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	TRHR	P34981	398 aa	Predicted RBP	7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	MAPK9	P45984	424 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	GPR1	P46091	355 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	ARSE	P51690	589 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	SUMO1	P63165	101 aa	Known RBP	7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	SLC25A11	Q02978	314 aa	Known RBP	7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	HHEX	Q03014	270 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	ABHD18	Q0P651	414 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	CHAF1B	Q13112	559 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	IL10RA	Q13651	578 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	DPYSL2	Q16555	572 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	CLPP	Q16740	277 aa	Predicted RBP	7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	ATP13A4	Q4VNC1	1196 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	LACTB2	Q53H82	288 aa	Predicted RBP	7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	DCAF12	Q5T6F0	453 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	HENMT1	Q5T8I9	393 aa	Known RBP	7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	HLA-DQA1	Q5Y7H0	255 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	CAPRIN2	Q6IMN6	1127 aa	Known RBP	7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	IYD	Q6PHW0	289 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	WDR74	Q6RFH5	385 aa	Predicted RBP	7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	RBM43	Q6ZSC3	357 aa	Known RBP	7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	CEP128	Q6ZU80	1094 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	CHST15	Q7LFX5	561 aa	Predicted RBP	7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	TEX26	Q8N6G2	289 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438		Q8NA96	180 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	NCSTN	Q92542	709 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	RSC1A1	Q92681	617 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	AP2M1	Q96CW1	435 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	CCDC120	Q96HB5	630 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	PLEKHG4B	Q96PX9	1271 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	ERGIC2	Q96RQ1	377 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	NRTN	Q99748	197 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	PCDH18	Q9HCL0	1135 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	NT5M	Q9NPB1	228 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	PRDM8	Q9NQV8	689 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	FBXO8	Q9NRD0	319 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	ZNF624	Q9P2J8	865 aa	Predicted RBP	7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	RCOR3	Q9P2K3	495 aa	Predicted RBP	7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	LIMA1	Q9UHB6	759 aa	Known RBP	7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	CROT	Q9UKG9	612 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	TLK1	Q9UKI8	766 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	CHKB	Q9Y259	395 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	RPS6KL1	Q9Y6S9	549 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	AKAP9	Q99996	3911 aa		7.75	□□□□□ -1.17
PPP4R1-225	ENST00000583438	APC	P25054	2843 aa		7.74	□□□□□ -1.17
PPP4R1-225	ENST00000583438	DIDO1	Q9BTC0	2240 aa	Known RBP	7.74	□□□□□ -1.17
PPP4R1-225	ENST00000583438	C9	P02748	559 aa		7.74	□□□□□ -1.17
PPP4R1-225	ENST00000583438	HLA-DQB2	P05538	268 aa		7.74	□□□□□ -1.17
PPP4R1-225	ENST00000583438	ZNF8	P17098	575 aa	Predicted RBP	7.74	□□□□□ -1.17
PPP4R1-225	ENST00000583438	HTR7	P34969	479 aa		7.74	□□□□□ -1.17
PPP4R1-225	ENST00000583438	SLC10A2	Q12908	348 aa	Predicted RBP	7.74	□□□□□ -1.17
PPP4R1-225	ENST00000583438	ERV3-1	Q14264	604 aa		7.74	□□□□□ -1.17
PPP4R1-225	ENST00000583438	ZNF235	Q14590	738 aa		7.74	□□□□□ -1.17
PPP4R1-225	ENST00000583438	RFTN1	Q14699	578 aa	Predicted RBP	7.74	□□□□□ -1.17
PPP4R1-225	ENST00000583438	KCNAB1	Q14722	419 aa		7.74	□□□□□ -1.17
PPP4R1-225	ENST00000583438	KIR3DS1	Q14943	382 aa		7.74	□□□□□ -1.17
PPP4R1-225	ENST00000583438	TESK1	Q15569	626 aa		7.74	□□□□□ -1.17
PPP4R1-225	ENST00000583438	NADK2	Q4G0N4	442 aa		7.74	□□□□□ -1.17
PPP4R1-225	ENST00000583438	ARMC12	Q5T9G4	340 aa		7.74	□□□□□ -1.17
PPP4R1-225	ENST00000583438	NCBP2-AS2	Q69YL0	99 aa		7.74	□□□□□ -1.17
PPP4R1-225	ENST00000583438	LCN10	Q6JVE6	187 aa		7.74	□□□□□ -1.17
PPP4R1-225	ENST00000583438	DCUN1D2	Q6PH85	259 aa		7.74	□□□□□ -1.17
PPP4R1-225	ENST00000583438	CBLL1	Q75N03	491 aa		7.74	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms