RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 PLOD1Q02809 727 aaPredicted RBP16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 CSHL1Q14406 222 aa16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 NFE2L1Q14494 772 aa16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 INSCQ1MX18 579 aa16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 PLA2G4EQ3MJ16 856 aa16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 ZNF542PQ5EBM4 170 aa16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 METRNLQ641Q3 311 aa16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 FAM83HQ6ZRV2 1179 aaPredicted RBP16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 TBC1D1Q86TI0 1168 aaPredicted RBP16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 PARGQ86W56 976 aa16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 CENPLQ8N0S6 344 aaPredicted RBP16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 SPATA6LQ8N4H0 392 aa16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 LILRA3Q8N6C8 439 aaPredicted RBP16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 KCTD4Q8WVF5 259 aa16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 NXNL1Q96CM4 212 aa16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 LOXL4Q96JB6 756 aa16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 GPR78Q96P69 363 aa16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 ARRDC1-AS1Q9H2J1 176 aa16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 COG4Q9H9E3 785 aa16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 KLC4Q9NSK0 619 aa16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 TRNAU1APQ9NX07 287 aaKnown RBP16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 MKS1Q9NXB0 559 aa16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 A0A1B0GVT2 93 aa16.02■□□□□ 0.16
CDK5RAP3-228ENST00000583363 PRR19A6NJB7 356 aa16.02■□□□□ 0.16
CDK5RAP3-228ENST00000583363 H3BQF6 201 aa16.02■□□□□ 0.16
CDK5RAP3-228ENST00000583363 COPEO14579 308 aa16.02■□□□□ 0.16
CDK5RAP3-228ENST00000583363 TM4SF5O14894 197 aa16.02■□□□□ 0.16
CDK5RAP3-228ENST00000583363 SCAMP1O15126 338 aa16.02■□□□□ 0.16
CDK5RAP3-228ENST00000583363 TYROBPO43914 113 aa16.02■□□□□ 0.16
CDK5RAP3-228ENST00000583363 SPAG7O75391 227 aa16.02■□□□□ 0.16
CDK5RAP3-228ENST00000583363 CSF2P04141 144 aa16.02■□□□□ 0.16
CDK5RAP3-228ENST00000583363 ACP5P13686 325 aa16.02■□□□□ 0.16
CDK5RAP3-228ENST00000583363 ENO3P13929 434 aaPredicted RBP16.02■□□□□ 0.16
CDK5RAP3-228ENST00000583363 CD1DP15813 335 aa16.02■□□□□ 0.16
CDK5RAP3-228ENST00000583363 VCLP18206 1134 aa16.02■□□□□ 0.16
CDK5RAP3-228ENST00000583363 HOXD12P35452 270 aa16.02■□□□□ 0.16
CDK5RAP3-228ENST00000583363 RGS4P49798 205 aa16.02■□□□□ 0.16
CDK5RAP3-228ENST00000583363 BLKP51451 505 aa16.02■□□□□ 0.16
CDK5RAP3-228ENST00000583363 LIMK1P53667 647 aa16.02■□□□□ 0.16
CDK5RAP3-228ENST00000583363 RPA4Q13156 261 aa16.02■□□□□ 0.16
CDK5RAP3-228ENST00000583363 BOP1Q14137 746 aaKnown RBP16.02■□□□□ 0.16
CDK5RAP3-228ENST00000583363 DUOXA1Q1HG43 343 aa16.02■□□□□ 0.16
CDK5RAP3-228ENST00000583363 AASDHQ4L235 1098 aaPredicted RBP16.02■□□□□ 0.16
CDK5RAP3-228ENST00000583363 CDHR3Q6ZTQ4 885 aa16.02■□□□□ 0.16
CDK5RAP3-228ENST00000583363 NEK10Q6ZWH5 1172 aa16.02■□□□□ 0.16
CDK5RAP3-228ENST00000583363 LCA5Q86VQ0 697 aa16.02■□□□□ 0.16
CDK5RAP3-228ENST00000583363 VRK3Q8IV63 474 aa16.02■□□□□ 0.16
CDK5RAP3-228ENST00000583363 PHACTR4Q8IZ21 702 aa16.02■□□□□ 0.16
CDK5RAP3-228ENST00000583363 CEP76Q8TAP6 659 aa16.02■□□□□ 0.16
CDK5RAP3-228ENST00000583363 TMEM159Q96B96 161 aa16.02■□□□□ 0.16
CDK5RAP3-228ENST00000583363 LINGO1Q96FE5 620 aa16.02■□□□□ 0.16
CDK5RAP3-228ENST00000583363 DERL2Q9GZP9 239 aa16.02■□□□□ 0.16
CDK5RAP3-228ENST00000583363 TMEM168Q9H0V1 697 aa16.02■□□□□ 0.16
CDK5RAP3-228ENST00000583363 TCEAL2Q9H3H9 227 aaPredicted RBP16.02■□□□□ 0.16
CDK5RAP3-228ENST00000583363 ERVMER34-1Q9H9K5 563 aa16.02■□□□□ 0.16
CDK5RAP3-228ENST00000583363 NMRAL1Q9HBL8 299 aa16.02■□□□□ 0.16
CDK5RAP3-228ENST00000583363 ZNF358Q9NW07 568 aa16.02■□□□□ 0.16
CDK5RAP3-228ENST00000583363 FAM53CQ9NYF3 392 aa16.02■□□□□ 0.16
CDK5RAP3-228ENST00000583363 ST14Q9Y5Y6 855 aa16.02■□□□□ 0.16
CDK5RAP3-228ENST00000583363 TNRC6BQ9UPQ9 1833 aaKnown RBP16.02■□□□□ 0.16
CDK5RAP3-228ENST00000583363 KNL1Q8NG31 2342 aa16.02■□□□□ 0.15
CDK5RAP3-228ENST00000583363 LAMA1P25391 3075 aa16.01■□□□□ 0.15
CDK5RAP3-228ENST00000583363 PRPF4O43172 522 aaKnown RBP eCLIP16.01■□□□□ 0.15
CDK5RAP3-228ENST00000583363 EPN2O95208 641 aa16.01■□□□□ 0.15
CDK5RAP3-228ENST00000583363 TOP3BO95985 862 aaKnown RBP16.01■□□□□ 0.15
CDK5RAP3-228ENST00000583363 ZNF806P0C7X5 589 aa16.01■□□□□ 0.15
CDK5RAP3-228ENST00000583363 MPC1LP0DKB6 136 aa16.01■□□□□ 0.15
CDK5RAP3-228ENST00000583363 NME1P15531 152 aaKnown RBP16.01■□□□□ 0.15
CDK5RAP3-228ENST00000583363 JUNDP17535 347 aa16.01■□□□□ 0.15
CDK5RAP3-228ENST00000583363 PDHA2P29803 388 aa16.01■□□□□ 0.15
CDK5RAP3-228ENST00000583363 CTSKP43235 329 aa16.01■□□□□ 0.15
CDK5RAP3-228ENST00000583363 PREPP48147 710 aa16.01■□□□□ 0.15
CDK5RAP3-228ENST00000583363 ATP6V0D1P61421 351 aa16.01■□□□□ 0.15
CDK5RAP3-228ENST00000583363 CTBSQ01459 385 aa16.01■□□□□ 0.15
CDK5RAP3-228ENST00000583363 BNC1Q01954 994 aa16.01■□□□□ 0.15
CDK5RAP3-228ENST00000583363 LRP8Q14114 963 aa16.01■□□□□ 0.15
CDK5RAP3-228ENST00000583363 FAM83EQ2M2I3 478 aa16.01■□□□□ 0.15
CDK5RAP3-228ENST00000583363 KIF19Q2TAC6 998 aa16.01■□□□□ 0.15
CDK5RAP3-228ENST00000583363 N4BP2L1Q5TBK1 243 aaPredicted RBP16.01■□□□□ 0.15
CDK5RAP3-228ENST00000583363 AGAP9Q5VTM2 703 aa16.01■□□□□ 0.15
CDK5RAP3-228ENST00000583363 ISCA2Q86U28 154 aa16.01■□□□□ 0.15
CDK5RAP3-228ENST00000583363 NRROSQ86YC3 692 aa16.01■□□□□ 0.15
CDK5RAP3-228ENST00000583363 SLC22A15Q8IZD6 547 aa16.01■□□□□ 0.15
CDK5RAP3-228ENST00000583363 GPBAR1Q8TDU6 330 aa16.01■□□□□ 0.15
CDK5RAP3-228ENST00000583363 GLMNQ92990 594 aa16.01■□□□□ 0.15
CDK5RAP3-228ENST00000583363 APOPT1Q96IL0 206 aa16.01■□□□□ 0.15
CDK5RAP3-228ENST00000583363 DPEP2Q9H4A9 486 aa16.01■□□□□ 0.15
CDK5RAP3-228ENST00000583363 CAAP1Q9H8G2 361 aa16.01■□□□□ 0.15
CDK5RAP3-228ENST00000583363 KCNK9Q9NPC2 374 aa16.01■□□□□ 0.15
CDK5RAP3-228ENST00000583363 DNAJC28Q9NX36 388 aa16.01■□□□□ 0.15
CDK5RAP3-228ENST00000583363 TMEM216Q9P0N5 145 aa16.01■□□□□ 0.15
CDK5RAP3-228ENST00000583363 FAM8A1Q9UBU6 413 aa16.01■□□□□ 0.15
CDK5RAP3-228ENST00000583363 ACSL5Q9ULC5 683 aa16.01■□□□□ 0.15
CDK5RAP3-228ENST00000583363 GRID1Q9ULK0 1009 aa16.01■□□□□ 0.15
CDK5RAP3-228ENST00000583363 KCNK6Q9Y257 313 aa16.01■□□□□ 0.15
CDK5RAP3-228ENST00000583363 DNAJC16Q9Y2G8 782 aa16.01■□□□□ 0.15
CDK5RAP3-228ENST00000583363 PLLPQ9Y342 182 aa16.01■□□□□ 0.15
CDK5RAP3-228ENST00000583363 GLRA3O75311 464 aa16■□□□□ 0.15
CDK5RAP3-228ENST00000583363 SLC18A1P54219 525 aa16■□□□□ 0.15
CDK5RAP3-228ENST00000583363 MPP2Q14168 576 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms