RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 KLRB1Q12918 225 aa9.54□□□□□ -0.88
CDK5RAP3-227ENST00000583352 MSS51Q4VC12 460 aa9.54□□□□□ -0.88
CDK5RAP3-227ENST00000583352 ATP1A1-AS1Q5TC04 95 aa9.54□□□□□ -0.88
CDK5RAP3-227ENST00000583352 C6orf15Q6UXA7 325 aaPredicted RBP9.54□□□□□ -0.88
CDK5RAP3-227ENST00000583352 TMEM26Q6ZUK4 368 aa9.54□□□□□ -0.88
CDK5RAP3-227ENST00000583352 CROCCP2Q86T23 111 aa9.54□□□□□ -0.88
CDK5RAP3-227ENST00000583352 TRIM48Q8IWZ4 208 aa9.54□□□□□ -0.88
CDK5RAP3-227ENST00000583352 CCDC13Q8IYE1 715 aa9.54□□□□□ -0.88
CDK5RAP3-227ENST00000583352 GOLGA6L1Q8N7Z2 621 aa9.54□□□□□ -0.88
CDK5RAP3-227ENST00000583352 CCNYQ8ND76 341 aa9.54□□□□□ -0.88
CDK5RAP3-227ENST00000583352 MCUQ8NE86 351 aa9.54□□□□□ -0.88
CDK5RAP3-227ENST00000583352 CCDC110Q8TBZ0 833 aa9.54□□□□□ -0.88
CDK5RAP3-227ENST00000583352 TLCD1Q96CP7 247 aa9.54□□□□□ -0.88
CDK5RAP3-227ENST00000583352 C9orf72Q96LT7 481 aa9.54□□□□□ -0.88
CDK5RAP3-227ENST00000583352 PLEKHG4BQ96PX9 1271 aa9.54□□□□□ -0.88
CDK5RAP3-227ENST00000583352 SPATA16Q9BXB7 569 aa9.54□□□□□ -0.88
CDK5RAP3-227ENST00000583352 ADGRE3Q9BY15 652 aa9.54□□□□□ -0.88
CDK5RAP3-227ENST00000583352 ULBP3Q9BZM4 244 aa9.54□□□□□ -0.88
CDK5RAP3-227ENST00000583352 BRD8Q9H0E9 1235 aa9.54□□□□□ -0.88
CDK5RAP3-227ENST00000583352 OR2AG1Q9H205 316 aa9.54□□□□□ -0.88
CDK5RAP3-227ENST00000583352 ETNK1Q9HBU6 452 aa9.54□□□□□ -0.88
CDK5RAP3-227ENST00000583352 SAYSD1Q9NPB0 183 aa9.54□□□□□ -0.88
CDK5RAP3-227ENST00000583352 RAB6BQ9NRW1 208 aa9.54□□□□□ -0.88
CDK5RAP3-227ENST00000583352 RAD18Q9NS91 495 aa9.54□□□□□ -0.88
CDK5RAP3-227ENST00000583352 PSD3Q9NYI0 1048 aa9.54□□□□□ -0.88
CDK5RAP3-227ENST00000583352 MRPS18BQ9Y676 258 aaKnown RBP9.54□□□□□ -0.88
CDK5RAP3-227ENST00000583352 TENM4Q6N022 2769 aa9.54□□□□□ -0.88
CDK5RAP3-227ENST00000583352 ATMQ13315 3056 aa9.54□□□□□ -0.88
CDK5RAP3-227ENST00000583352 PRR19A6NJB7 356 aa9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 PDZK1P1A8MUH7 402 aa9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 MKRN2OSH3BPM6 223 aa9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 TMEM63AO94886 807 aa9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 UBXN7O94888 489 aa9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 SLC25A14O95258 325 aaPredicted RBP9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 JCHAINP01591 159 aa9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 GP1BBP13224 206 aa9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 TYRP1P17643 537 aa9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 SEPHS1P49903 392 aa9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 IL11RAQ14626 422 aa9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 INSCQ1MX18 579 aa9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 PLA2G4EQ3MJ16 856 aa9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 ZNF648Q5T619 568 aaPredicted RBP9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 CRTC3Q6UUV7 619 aa9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 CENPUQ71F23 418 aa9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 LRRTM4Q86VH4 590 aa9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 ATCAYQ86WG3 371 aa9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 RASGRP3Q8IV61 690 aa9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 FAM26EQ8N5C1 309 aa9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 TRAM1L1Q8N609 369 aa9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 GALNT6Q8NCL4 622 aa9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 UHMK1Q8TAS1 419 aaKnown RBP9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 FAM76AQ8TAV0 307 aa9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 HDAC11Q96DB2 347 aa9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 STAMBPL1Q96FJ0 436 aa9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 PGM2Q96G03 612 aa9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 SPATA13Q96N96 652 aa9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 TGM7Q96PF1 710 aa9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 WDR83Q9BRX9 315 aaKnown RBP9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 ZSCAN5AQ9BUG6 496 aa9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 ZNF768Q9H5H4 540 aaKnown RBP9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 ZFYVE1Q9HBF4 777 aa9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 TRIM39Q9HCM9 518 aa9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 POT1Q9NUX5 634 aa9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 SCHIP1Q9P0W5 487 aaPredicted RBP9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 CROTQ9UKG9 612 aa9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 POLHQ9Y253 713 aa9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 TP53TG5Q9Y2B4 290 aa9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 KCNMB2Q9Y691 235 aa9.53□□□□□ -0.88
CDK5RAP3-227ENST00000583352 CLEC18AA5D8T8 446 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 GOLGA8MH3BSY2 632 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 RASGRF2O14827 1237 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 CHUKO15111 745 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 KMOO15229 486 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 KATNA1O75449 491 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 ZNF189O75820 626 aaPredicted RBP9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 RASSF9O75901 435 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 KIAA0754O94854 1291 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 ACSL3O95573 720 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 MMP2P08253 660 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 CCNYL3P0C7X3 344 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 ZNF28P17035 718 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 ZNF7P17097 686 aaPredicted RBP9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 F8A1P23610 371 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 FDFT1P37268 417 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 SLC19A1P41440 591 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 LEPRP48357 1165 aaKnown RBP9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 GPX6P59796 221 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 DCDC1P59894 354 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 IFI35P80217 286 aaPredicted RBP9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 PPIDQ08752 370 aaKnown RBP9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 IFFO1Q0D2I5 559 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 PDIA2Q13087 525 aaKnown RBP9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 SEMA5AQ13591 1074 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 ERV3-1Q14264 604 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 GALNT3Q14435 633 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 FASTKD3Q14CZ7 662 aaKnown RBP9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 SEPT7Q16181 437 aaKnown RBP9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 HIF1AQ16665 826 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 PARP6Q2NL67 630 aa9.52□□□□□ -0.89
CDK5RAP3-227ENST00000583352 KRT71Q3SY84 523 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms