RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 MAST4O15021 2626 aa9.69□□□□□ -0.86
GGA3-209ENST00000580646 NUDT21O43809 227 aaKnown RBP9.69□□□□□ -0.86
GGA3-209ENST00000580646 POP7O75817 140 aaKnown RBP9.69□□□□□ -0.86
GGA3-209ENST00000580646 RPLP0P05388 317 aaKnown RBP9.69□□□□□ -0.86
GGA3-209ENST00000580646 F3P13726 295 aa9.69□□□□□ -0.86
GGA3-209ENST00000580646 PNLIPP16233 465 aa9.69□□□□□ -0.86
GGA3-209ENST00000580646 IDSP22304 550 aa9.69□□□□□ -0.86
GGA3-209ENST00000580646 AK4P27144 223 aaPredicted RBP9.69□□□□□ -0.86
GGA3-209ENST00000580646 MAGEA4P43358 317 aa9.69□□□□□ -0.86
GGA3-209ENST00000580646 ABCG1P45844 678 aa9.69□□□□□ -0.86
GGA3-209ENST00000580646 FASLGP48023 281 aa9.69□□□□□ -0.86
GGA3-209ENST00000580646 CARSP49589 748 aaKnown RBP9.69□□□□□ -0.86
GGA3-209ENST00000580646 PDX1P52945 283 aa9.69□□□□□ -0.86
GGA3-209ENST00000580646 ERVPABLB-1P60509 514 aa9.69□□□□□ -0.86
GGA3-209ENST00000580646 KIR2DS5Q14953 304 aa9.69□□□□□ -0.86
GGA3-209ENST00000580646 SLMAPQ14BN4 828 aa9.69□□□□□ -0.86
GGA3-209ENST00000580646 HSP90AA5PQ58FG0 334 aa9.69□□□□□ -0.86
GGA3-209ENST00000580646 C3orf38Q5JPI3 329 aa9.69□□□□□ -0.86
GGA3-209ENST00000580646 METRNLQ641Q3 311 aa9.69□□□□□ -0.86
GGA3-209ENST00000580646 SLC30A9Q6PML9 568 aa9.69□□□□□ -0.86
GGA3-209ENST00000580646 IGF2-ASQ6U949 168 aa9.69□□□□□ -0.86
GGA3-209ENST00000580646 CRTC3Q6UUV7 619 aa9.69□□□□□ -0.86
GGA3-209ENST00000580646 ABRAXAS1Q6UWZ7 409 aa9.69□□□□□ -0.86
GGA3-209ENST00000580646 PDZD3Q86UT5 571 aa9.69□□□□□ -0.86
GGA3-209ENST00000580646 SLC26A11Q86WA9 606 aa9.69□□□□□ -0.86
GGA3-209ENST00000580646 ANKMY2Q8IV38 441 aa9.69□□□□□ -0.86
GGA3-209ENST00000580646 OTUD6BQ8N6M0 293 aa9.69□□□□□ -0.86
GGA3-209ENST00000580646 Q8N9G6 341 aaPredicted RBP9.69□□□□□ -0.86
GGA3-209ENST00000580646 LRRN4CLQ8ND94 238 aa9.69□□□□□ -0.86
GGA3-209ENST00000580646 WDR36Q8NI36 951 aaKnown RBP9.69□□□□□ -0.86
GGA3-209ENST00000580646 HM13Q8TCT9 377 aa9.69□□□□□ -0.86
GGA3-209ENST00000580646 ZDHHC1Q8WTX9 485 aa9.69□□□□□ -0.86
GGA3-209ENST00000580646 CFAP36Q96G28 342 aa9.69□□□□□ -0.86
GGA3-209ENST00000580646 PANX3Q96QZ0 392 aa9.69□□□□□ -0.86
GGA3-209ENST00000580646 GFM1Q96RP9 751 aaKnown RBP9.69□□□□□ -0.86
GGA3-209ENST00000580646 FUT8Q9BYC5 575 aa9.69□□□□□ -0.86
GGA3-209ENST00000580646 LATS2Q9NRM7 1088 aa9.69□□□□□ -0.86
GGA3-209ENST00000580646 KLC4Q9NSK0 619 aa9.69□□□□□ -0.86
GGA3-209ENST00000580646 LRIT1Q9P2V4 623 aa9.69□□□□□ -0.86
GGA3-209ENST00000580646 SLC23A2Q9UGH3 650 aa9.69□□□□□ -0.86
GGA3-209ENST00000580646 FBXO5Q9UKT4 447 aa9.69□□□□□ -0.86
GGA3-209ENST00000580646 SATB2Q9UPW6 733 aa9.69□□□□□ -0.86
GGA3-209ENST00000580646 PLEKHM1Q9Y4G2 1056 aa9.69□□□□□ -0.86
GGA3-209ENST00000580646 PCDHGA8Q9Y5G5 932 aa9.69□□□□□ -0.86
GGA3-209ENST00000580646 RNF215Q9Y6U7 377 aa9.69□□□□□ -0.86
GGA3-209ENST00000580646 UNC13CQ8NB66 2214 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 COL27A1Q8IZC6 1860 aaPredicted RBP9.68□□□□□ -0.86
GGA3-209ENST00000580646 CCDC187A0A096LP49 1063 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 D6RAR5 112 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 GOLGA8KD6RF30 607 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 GOLGA8TH3BQL2 631 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 TMX2-CTNND1H3BSU7 103 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 KPNA5O15131 536 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 OR1I1O60431 355 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 S1PR4O95977 384 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 RHOXF2BP0C7M4 288 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 CD9P21926 228 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 RBMS1P29558 406 aaKnown RBP9.68□□□□□ -0.86
GGA3-209ENST00000580646 SLC1A2P43004 574 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 CD151P48509 253 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 GTF2A1P52655 376 aaPredicted RBP9.68□□□□□ -0.86
GGA3-209ENST00000580646 INHBCP55103 352 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 MAZP56270 477 aaKnown RBP9.68□□□□□ -0.86
GGA3-209ENST00000580646 MGAT5Q09328 741 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 NAB1Q13506 487 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 NR1D2Q14995 579 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 TEX35Q5T0J7 233 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 TEDDM1Q5T9Z0 273 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 IYDQ6PHW0 289 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 XKR5Q6UX68 686 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 DET1Q7L5Y6 550 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 B3GNT8Q7Z7M8 397 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 CCDC25Q86WR0 208 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 RBM12BQ8IXT5 1001 aaKnown RBP9.68□□□□□ -0.86
GGA3-209ENST00000580646 NAGSQ8N159 534 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 KRT222Q8N1A0 295 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 SFRP1Q8N474 314 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 ARL14Q8N4G2 192 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 CLDN19Q8N6F1 224 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 ZNF248Q8NDW4 579 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 IFT81Q8WYA0 676 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 CDKL2Q92772 493 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 CCDC97Q96F63 343 aaPredicted RBP9.68□□□□□ -0.86
GGA3-209ENST00000580646 CRELD1Q96HD1 420 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 PRR11Q96HE9 360 aaPredicted RBP9.68□□□□□ -0.86
GGA3-209ENST00000580646 SLC46A1Q96NT5 459 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 BIRC8Q96P09 236 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 RHOXF2Q9BQY4 288 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 PLCD4Q9BRC7 762 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 RASSF4Q9H2L5 321 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 COG4Q9H9E3 785 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 LRRC4CQ9HCJ2 640 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 ASCL3Q9NQ33 180 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 THSD1Q9NS62 852 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 IARS2Q9NSE4 1012 aaKnown RBP9.68□□□□□ -0.86
GGA3-209ENST00000580646 ZFATQ9P243 1243 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 KLHL42Q9P2K6 505 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 TBC1D29Q9UFV1 150 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 KCNK6Q9Y257 313 aa9.68□□□□□ -0.86
GGA3-209ENST00000580646 PRKAB1Q9Y478 270 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms