RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 LMF1Q96S06 567 aa13.57□□□□□ -0.24
CSNK1D-213ENST00000580446 MGME1Q9BQP7 344 aa13.57□□□□□ -0.24
CSNK1D-213ENST00000580446 TRIM39Q9HCM9 518 aa13.57□□□□□ -0.24
CSNK1D-213ENST00000580446 SIX2Q9NPC8 291 aa13.57□□□□□ -0.24
CSNK1D-213ENST00000580446 FAM8A1Q9UBU6 413 aa13.57□□□□□ -0.24
CSNK1D-213ENST00000580446 POMT2Q9UKY4 750 aa13.57□□□□□ -0.24
CSNK1D-213ENST00000580446 CCDC88CQ9P219 2028 aa13.56□□□□□ -0.24
CSNK1D-213ENST00000580446 NPIPA5E9PKD4 350 aa13.56□□□□□ -0.24
CSNK1D-213ENST00000580446 EEF2KO00418 725 aaKnown RBP13.56□□□□□ -0.24
CSNK1D-213ENST00000580446 SMAD7O15105 426 aaKnown RBP13.56□□□□□ -0.24
CSNK1D-213ENST00000580446 OR2B3O76000 313 aa13.56□□□□□ -0.24
CSNK1D-213ENST00000580446 GPD1P21695 349 aa13.56□□□□□ -0.24
CSNK1D-213ENST00000580446 WASH2PQ6VEQ5 465 aa13.56□□□□□ -0.24
CSNK1D-213ENST00000580446 TRIM73Q86UV7 250 aa13.56□□□□□ -0.24
CSNK1D-213ENST00000580446 KRTAP1-3Q8IUG1 177 aa13.56□□□□□ -0.24
CSNK1D-213ENST00000580446 CREBRFQ8IUR6 639 aa13.56□□□□□ -0.24
CSNK1D-213ENST00000580446 SPDYE1Q8NFV5 336 aaPredicted RBP13.56□□□□□ -0.24
CSNK1D-213ENST00000580446 OR11G2Q8NGC1 345 aa13.56□□□□□ -0.24
CSNK1D-213ENST00000580446 SLC20A1Q8WUM9 679 aa13.56□□□□□ -0.24
CSNK1D-213ENST00000580446 NAT14Q8WUY8 206 aa13.56□□□□□ -0.24
CSNK1D-213ENST00000580446 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.56□□□□□ -0.24
CSNK1D-213ENST00000580446 C8orf44Q96CB5 159 aa13.56□□□□□ -0.24
CSNK1D-213ENST00000580446 SPATA32Q96LK8 384 aa13.56□□□□□ -0.24
CSNK1D-213ENST00000580446 DMRTA2Q96SC8 542 aa13.56□□□□□ -0.24
CSNK1D-213ENST00000580446 FAM60AQ9NP50 221 aa13.56□□□□□ -0.24
CSNK1D-213ENST00000580446 NT5MQ9NPB1 228 aa13.56□□□□□ -0.24
CSNK1D-213ENST00000580446 KCNN3Q9UGI6 736 aa13.56□□□□□ -0.24
CSNK1D-213ENST00000580446 NPIPA1Q9UND3 350 aa13.56□□□□□ -0.24
CSNK1D-213ENST00000580446 FOXO6A8MYZ6 492 aa13.55□□□□□ -0.24
CSNK1D-213ENST00000580446 DAPK3O43293 454 aa13.55□□□□□ -0.24
CSNK1D-213ENST00000580446 GADD45BO75293 160 aaPredicted RBP13.55□□□□□ -0.24
CSNK1D-213ENST00000580446 CTAG2O75638 210 aa13.55□□□□□ -0.24
CSNK1D-213ENST00000580446 WDPCPO95876 746 aa13.55□□□□□ -0.24
CSNK1D-213ENST00000580446 NEFLP07196 543 aa13.55□□□□□ -0.24
CSNK1D-213ENST00000580446 UQCRHP07919 91 aa13.55□□□□□ -0.24
CSNK1D-213ENST00000580446 MTHFD1P11586 935 aaKnown RBP13.55□□□□□ -0.24
CSNK1D-213ENST00000580446 ABOP16442 354 aa13.55□□□□□ -0.24
CSNK1D-213ENST00000580446 ERCC2P18074 760 aa13.55□□□□□ -0.24
CSNK1D-213ENST00000580446 HLA-DPA1P20036 260 aa13.55□□□□□ -0.24
CSNK1D-213ENST00000580446 ITGAXP20702 1163 aa13.55□□□□□ -0.24
CSNK1D-213ENST00000580446 MSX1P28360 303 aa13.55□□□□□ -0.24
CSNK1D-213ENST00000580446 YBX1P67809 324 aaKnown RBP13.55□□□□□ -0.24
CSNK1D-213ENST00000580446 ITKQ08881 620 aa13.55□□□□□ -0.24
CSNK1D-213ENST00000580446 XRCC4Q13426 336 aa13.55□□□□□ -0.24
CSNK1D-213ENST00000580446 NFE2L1Q14494 772 aa13.55□□□□□ -0.24
CSNK1D-213ENST00000580446 RBBP7Q16576 425 aa13.55□□□□□ -0.24
CSNK1D-213ENST00000580446 TTI2Q6NXR4 508 aa13.55□□□□□ -0.24
CSNK1D-213ENST00000580446 WDR59Q6PJI9 974 aa13.55□□□□□ -0.24
CSNK1D-213ENST00000580446 Q6ZPB1 254 aaPredicted RBP13.55□□□□□ -0.24
CSNK1D-213ENST00000580446 CHSY3Q70JA7 882 aa13.55□□□□□ -0.24
CSNK1D-213ENST00000580446 DOLPP1Q86YN1 238 aa13.55□□□□□ -0.24
CSNK1D-213ENST00000580446 FAM71AQ8IYT1 594 aa13.55□□□□□ -0.24
CSNK1D-213ENST00000580446 GPR135Q8IZ08 494 aa13.55□□□□□ -0.24
CSNK1D-213ENST00000580446 VWA5B2Q8N398 1253 aa13.55□□□□□ -0.24
CSNK1D-213ENST00000580446 MARVELD2Q8N4S9 558 aa13.55□□□□□ -0.24
CSNK1D-213ENST00000580446 KCTD15Q96SI1 283 aaPredicted RBP13.55□□□□□ -0.24
CSNK1D-213ENST00000580446 INSM2Q96T92 566 aaPredicted RBP13.55□□□□□ -0.24
CSNK1D-213ENST00000580446 C17orf62Q9BQA9 187 aa13.55□□□□□ -0.24
CSNK1D-213ENST00000580446 CLSTN2Q9H4D0 955 aa13.55□□□□□ -0.24
CSNK1D-213ENST00000580446 DHX35Q9H5Z1 703 aaKnown RBP13.55□□□□□ -0.24
CSNK1D-213ENST00000580446 IRAK4Q9NWZ3 460 aa13.55□□□□□ -0.24
CSNK1D-213ENST00000580446 SLC24A2Q9UI40 661 aa13.55□□□□□ -0.24
CSNK1D-213ENST00000580446 NOCTQ9UK39 431 aaKnown RBP13.55□□□□□ -0.24
CSNK1D-213ENST00000580446 CTNND2Q9UQB3 1225 aa13.55□□□□□ -0.24
CSNK1D-213ENST00000580446 ZANQ9Y493 2812 aa13.54□□□□□ -0.24
CSNK1D-213ENST00000580446 PCM1Q15154 2024 aa13.54□□□□□ -0.24
CSNK1D-213ENST00000580446 SEC16AO15027 2179 aa13.54□□□□□ -0.24
CSNK1D-213ENST00000580446 TOXO94900 526 aa13.54□□□□□ -0.24
CSNK1D-213ENST00000580446 CDK14O94921 469 aa13.54□□□□□ -0.24
CSNK1D-213ENST00000580446 HBQ1P09105 142 aa13.54□□□□□ -0.24
CSNK1D-213ENST00000580446 PON1P27169 355 aa13.54□□□□□ -0.24
CSNK1D-213ENST00000580446 SOX11P35716 441 aa13.54□□□□□ -0.24
CSNK1D-213ENST00000580446 SPAM1P38567 509 aa13.54□□□□□ -0.24
CSNK1D-213ENST00000580446 DSC2Q02487 901 aa13.54□□□□□ -0.24
CSNK1D-213ENST00000580446 OLIG2Q13516 323 aa13.54□□□□□ -0.24
CSNK1D-213ENST00000580446 PKP1Q13835 747 aa13.54□□□□□ -0.24
CSNK1D-213ENST00000580446 RHBDD2Q6NTF9 364 aa13.54□□□□□ -0.24
CSNK1D-213ENST00000580446 CCDC71Q8IV32 467 aaPredicted RBP13.54□□□□□ -0.24
CSNK1D-213ENST00000580446 PRSS58Q8IYP2 241 aa13.54□□□□□ -0.24
CSNK1D-213ENST00000580446 MSANTD4Q8NCY6 345 aa13.54□□□□□ -0.24
CSNK1D-213ENST00000580446 GPR26Q8NDV2 337 aa13.54□□□□□ -0.24
CSNK1D-213ENST00000580446 ANKRD20A12PQ8NF67 263 aa13.54□□□□□ -0.24
CSNK1D-213ENST00000580446 PSMF1Q92530 271 aa13.54□□□□□ -0.24
CSNK1D-213ENST00000580446 N4BP2L2Q92802 583 aaPredicted RBP13.54□□□□□ -0.24
CSNK1D-213ENST00000580446 GLYATL1Q969I3 302 aa13.54□□□□□ -0.24
CSNK1D-213ENST00000580446 EID2BQ96D98 161 aa13.54□□□□□ -0.24
CSNK1D-213ENST00000580446 GPR137Q96N19 417 aa13.54□□□□□ -0.24
CSNK1D-213ENST00000580446 HES7Q9BYE0 225 aa13.54□□□□□ -0.24
CSNK1D-213ENST00000580446 WWP1Q9H0M0 922 aa13.54□□□□□ -0.24
CSNK1D-213ENST00000580446 CLEC4MQ9H2X3 399 aaPredicted RBP13.54□□□□□ -0.24
CSNK1D-213ENST00000580446 TXLNGQ9NUQ3 528 aa13.54□□□□□ -0.24
CSNK1D-213ENST00000580446 RMND1Q9NWS8 449 aa13.54□□□□□ -0.24
CSNK1D-213ENST00000580446 COQ3Q9NZJ6 369 aa13.54□□□□□ -0.24
CSNK1D-213ENST00000580446 PKD2L2Q9NZM6 624 aa13.54□□□□□ -0.24
CSNK1D-213ENST00000580446 PSMA7O14818 248 aa13.53□□□□□ -0.24
CSNK1D-213ENST00000580446 F13A1P00488 732 aa13.53□□□□□ -0.24
CSNK1D-213ENST00000580446 PRLP01236 227 aa13.53□□□□□ -0.24
CSNK1D-213ENST00000580446 PIRTP0C851 137 aa13.53□□□□□ -0.24
CSNK1D-213ENST00000580446 KRT3P12035 628 aa13.53□□□□□ -0.24
CSNK1D-213ENST00000580446 ALAS2P22557 587 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms