RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 MRPL38Q96DV4 380 aaKnown RBP3.09□□□□□ -1.91
KPNB1-208ENST00000580019 DTNBP1Q96EV8 351 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 CLMNQ96JQ2 1002 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 NSMCE2Q96MF7 247 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 LRRC3BQ96PB8 259 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 TEFMQ96QE5 360 aaKnown RBP3.09□□□□□ -1.91
KPNB1-208ENST00000580019 SIN3AQ96ST3 1273 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 SEMA3CQ99985 751 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 TMEM47Q9BQJ4 181 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 ERP44Q9BS26 406 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 ABHD6Q9BV23 337 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 KATNB1Q9BVA0 655 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 ACTRT3Q9BYD9 372 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 OSBPL8Q9BZF1 889 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 ACPTQ9BZG2 426 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 TRIM2Q9C040 744 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 SLCO5A1Q9H2Y9 848 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 KCNK15Q9H427 330 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 CHMP4BQ9H444 224 aaKnown RBP3.09□□□□□ -1.91
KPNB1-208ENST00000580019 COQ10BQ9H8M1 238 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 MINDY3Q9H8M7 445 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 TM9SF3Q9HD45 589 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 NGBQ9NPG2 151 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 CD93Q9NPY3 652 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 FAM118AQ9NWS6 357 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 NMRK1Q9NWW6 199 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 ARL15Q9NXU5 204 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 LARSQ9P2J5 1176 aaKnown RBP3.09□□□□□ -1.91
KPNB1-208ENST00000580019 ANKMY1Q9P2S6 941 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 NLKQ9UBE8 527 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 CTNNAL1Q9UBT7 734 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 TRIM10Q9UDY6 481 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 PTBP2Q9UKA9 531 aaKnown RBP3.09□□□□□ -1.91
KPNB1-208ENST00000580019 TSPAN16Q9UKR8 245 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 ICKQ9UPZ9 632 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 DTX4Q9Y2E6 619 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 C2CD2Q9Y426 696 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 TEX264Q9Y6I9 313 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 DDX49Q9Y6V7 483 aaKnown RBP3.09□□□□□ -1.91
KPNB1-208ENST00000580019 MYO5CQ9NQX4 1742 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 PNPLA6Q8IY17 1366 aa3.09□□□□□ -1.92
KPNB1-208ENST00000580019 SETD5Q9C0A6 1442 aa3.09□□□□□ -1.92
KPNB1-208ENST00000580019 PZPP20742 1482 aa3.09□□□□□ -1.92
KPNB1-208ENST00000580019 RALGAPBQ86X10 1494 aa3.09□□□□□ -1.92
KPNB1-208ENST00000580019 ARHGAP23Q9P227 1491 aa3.09□□□□□ -1.92
KPNB1-208ENST00000580019 KDM5AP29375 1690 aaKnown RBP3.08□□□□□ -1.92
KPNB1-208ENST00000580019 NOTCH2Q04721 2471 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 A0A0B4J293 547 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 A0A0G2JPF8 293 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 CTAGE15A4D2H0 777 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 CFAP73A6NFT4 308 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 HNRNPCL3B7ZW38 293 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 BOLA2-SMG1P6H3BVE0 249 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 CLDN3O15551 220 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 PRDM1O75626 825 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 IDH1O75874 414 aaKnown RBP3.08□□□□□ -1.92
KPNB1-208ENST00000580019 RSL1D1O76021 490 aaKnown RBP3.08□□□□□ -1.92
KPNB1-208ENST00000580019 ZWINTO95229 277 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 TGFAP01135 160 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 SERPING1P05155 500 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 RHOP08100 348 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 FAM86B2P0C5J1 330 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 CTAGE8P0CG41 777 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 C8orf89P0DMQ9 161 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 HNRNPCL4P0DMR1 293 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 FCGR2AP12318 317 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 NCF1P14598 390 aaPredicted RBP3.08□□□□□ -1.92
KPNB1-208ENST00000580019 TNFRSF1BP20333 461 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 ITGAXP20702 1163 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 TGM2P21980 687 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 DNAJB1P25685 340 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 ACADLP28330 430 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 SFNP31947 248 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 CYP2C18P33260 490 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 WNT5AP41221 380 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 MTIF2P46199 727 aaKnown RBP3.08□□□□□ -1.92
KPNB1-208ENST00000580019 VPS41P49754 854 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 UCP2P55851 309 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 TAS2R40P59535 323 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 RAE1P78406 368 aaKnown RBP3.08□□□□□ -1.92
KPNB1-208ENST00000580019 RUNX1T1Q06455 604 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 LPIN1Q14693 890 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 CNGA3Q16281 694 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 SHROOM1Q2M3G4 852 aaPredicted RBP3.08□□□□□ -1.92
KPNB1-208ENST00000580019 TCTN1Q2MV58 587 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 VWC2Q2TAL6 325 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 USP41Q3LFD5 358 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 TBC1D25Q3MII6 688 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 KRT71Q3SY84 523 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 IFI44LQ53G44 452 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 FASTKD1Q53R41 847 aaKnown RBP3.08□□□□□ -1.92
KPNB1-208ENST00000580019 HSP90B2PQ58FF3 399 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 TREML2Q5T2D2 321 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 TMEM63BQ5T3F8 832 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 LRIF1Q5T3J3 769 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 TSTD2Q5T7W7 516 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 ATAD3BQ5T9A4 648 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 TEDDM1Q5T9Z0 273 aa3.08□□□□□ -1.92
KPNB1-208ENST00000580019 RNASEH2BQ5TBB1 312 aaKnown RBP3.08□□□□□ -1.92
KPNB1-208ENST00000580019 RAET1GQ6H3X3 334 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms