RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 DSG2Q14126 1118 aa10.67□□□□□ -0.7
GGA3-206ENST00000578773 RFTN1Q14699 578 aaPredicted RBP10.67□□□□□ -0.7
GGA3-206ENST00000578773 KLHL10Q6JEL2 608 aa10.67□□□□□ -0.7
GGA3-206ENST00000578773 WDR59Q6PJI9 974 aa10.67□□□□□ -0.7
GGA3-206ENST00000578773 DOLPP1Q86YN1 238 aa10.67□□□□□ -0.7
GGA3-206ENST00000578773 FAM71AQ8IYT1 594 aa10.67□□□□□ -0.7
GGA3-206ENST00000578773 DTWD1Q8N5C7 304 aa10.67□□□□□ -0.7
GGA3-206ENST00000578773 GPR26Q8NDV2 337 aa10.67□□□□□ -0.7
GGA3-206ENST00000578773 OR11G2Q8NGC1 345 aa10.67□□□□□ -0.7
GGA3-206ENST00000578773 BRIX1Q8TDN6 353 aaKnown RBP10.67□□□□□ -0.7
GGA3-206ENST00000578773 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.67□□□□□ -0.7
GGA3-206ENST00000578773 LMF1Q96S06 567 aa10.67□□□□□ -0.7
GGA3-206ENST00000578773 KCTD15Q96SI1 283 aaPredicted RBP10.67□□□□□ -0.7
GGA3-206ENST00000578773 POLDIP3Q9BY77 421 aaKnown RBP10.67□□□□□ -0.7
GGA3-206ENST00000578773 SOX17Q9H6I2 414 aaPredicted RBP10.67□□□□□ -0.7
GGA3-206ENST00000578773 ZNF160Q9HCG1 818 aa10.67□□□□□ -0.7
GGA3-206ENST00000578773 TRIM39Q9HCM9 518 aa10.67□□□□□ -0.7
GGA3-206ENST00000578773 IMP3Q9NV31 184 aaKnown RBP10.67□□□□□ -0.7
GGA3-206ENST00000578773 DNAJC12Q9UKB3 198 aa10.67□□□□□ -0.7
GGA3-206ENST00000578773 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.67□□□□□ -0.7
GGA3-206ENST00000578773 FHOD1Q9Y613 1164 aa10.67□□□□□ -0.7
GGA3-206ENST00000578773 DNAJC13O75165 2243 aa10.67□□□□□ -0.7
GGA3-206ENST00000578773 C1orf232A0A0U1RR37 186 aa10.66□□□□□ -0.7
GGA3-206ENST00000578773 CTAG2O75638 210 aa10.66□□□□□ -0.7
GGA3-206ENST00000578773 WDPCPO95876 746 aa10.66□□□□□ -0.7
GGA3-206ENST00000578773 F13A1P00488 732 aa10.66□□□□□ -0.7
GGA3-206ENST00000578773 ERCC2P18074 760 aa10.66□□□□□ -0.7
GGA3-206ENST00000578773 GPD1P21695 349 aa10.66□□□□□ -0.7
GGA3-206ENST00000578773 DNASE1P24855 282 aa10.66□□□□□ -0.7
GGA3-206ENST00000578773 PON1P27169 355 aa10.66□□□□□ -0.7
GGA3-206ENST00000578773 GABRA4P48169 554 aa10.66□□□□□ -0.7
GGA3-206ENST00000578773 ARSEP51690 589 aa10.66□□□□□ -0.7
GGA3-206ENST00000578773 YBX1P67809 324 aaKnown RBP10.66□□□□□ -0.7
GGA3-206ENST00000578773 DCDP81605 110 aaKnown RBP10.66□□□□□ -0.7
GGA3-206ENST00000578773 PTP4A2Q12974 167 aa10.66□□□□□ -0.7
GGA3-206ENST00000578773 NFE2L1Q14494 772 aa10.66□□□□□ -0.7
GGA3-206ENST00000578773 PCOLCEQ15113 449 aa10.66□□□□□ -0.7
GGA3-206ENST00000578773 TUBB8Q3ZCM7 444 aa10.66□□□□□ -0.7
GGA3-206ENST00000578773 NKAIN1Q4KMZ8 207 aa10.66□□□□□ -0.7
GGA3-206ENST00000578773 ZNF569Q5MCW4 686 aa10.66□□□□□ -0.7
GGA3-206ENST00000578773 IRAK1BP1Q5VVH5 260 aa10.66□□□□□ -0.7
GGA3-206ENST00000578773 RHBDD2Q6NTF9 364 aa10.66□□□□□ -0.7
GGA3-206ENST00000578773 DPY19L2P1Q6NXN4 242 aa10.66□□□□□ -0.7
GGA3-206ENST00000578773 COX15Q7KZN9 410 aa10.66□□□□□ -0.7
GGA3-206ENST00000578773 TRIM73Q86UV7 250 aa10.66□□□□□ -0.7
GGA3-206ENST00000578773 SPDYE1Q8NFV5 336 aaPredicted RBP10.66□□□□□ -0.7
GGA3-206ENST00000578773 C8orf44Q96CB5 159 aa10.66□□□□□ -0.7
GGA3-206ENST00000578773 PEBP4Q96S96 227 aa10.66□□□□□ -0.7
GGA3-206ENST00000578773 INSM2Q96T92 566 aaPredicted RBP10.66□□□□□ -0.7
GGA3-206ENST00000578773 SPSB2Q99619 263 aa10.66□□□□□ -0.7
GGA3-206ENST00000578773 SPATA16Q9BXB7 569 aa10.66□□□□□ -0.7
GGA3-206ENST00000578773 HES7Q9BYE0 225 aa10.66□□□□□ -0.7
GGA3-206ENST00000578773 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.66□□□□□ -0.7
GGA3-206ENST00000578773 ETNK2Q9NVF9 386 aa10.66□□□□□ -0.7
GGA3-206ENST00000578773 KCNN3Q9UGI6 736 aa10.66□□□□□ -0.7
GGA3-206ENST00000578773 SLC24A2Q9UI40 661 aa10.66□□□□□ -0.7
GGA3-206ENST00000578773 PPT2Q9UMR5 302 aa10.66□□□□□ -0.7
GGA3-206ENST00000578773 HRH3Q9Y5N1 445 aa10.66□□□□□ -0.7
GGA3-206ENST00000578773 EEF2KO00418 725 aaKnown RBP10.65□□□□□ -0.7
GGA3-206ENST00000578773 CRYABP02511 175 aaKnown RBP10.65□□□□□ -0.7
GGA3-206ENST00000578773 SLC4A1P02730 911 aa10.65□□□□□ -0.7
GGA3-206ENST00000578773 NEFLP07196 543 aa10.65□□□□□ -0.7
GGA3-206ENST00000578773 TPOP07202 933 aa10.65□□□□□ -0.7
GGA3-206ENST00000578773 HOXD4P09016 255 aaPredicted RBP10.65□□□□□ -0.7
GGA3-206ENST00000578773 MTHFD1P11586 935 aaKnown RBP10.65□□□□□ -0.7
GGA3-206ENST00000578773 HOXC12P31275 282 aa10.65□□□□□ -0.7
GGA3-206ENST00000578773 DGKQP52824 942 aa10.65□□□□□ -0.7
GGA3-206ENST00000578773 KRT85P78386 507 aa10.65□□□□□ -0.7
GGA3-206ENST00000578773 OGDHQ02218 1023 aa10.65□□□□□ -0.7
GGA3-206ENST00000578773 DSC2Q02487 901 aa10.65□□□□□ -0.7
GGA3-206ENST00000578773 ZIC1Q15915 447 aa10.65□□□□□ -0.7
GGA3-206ENST00000578773 CES4AQ5XG92 561 aa10.65□□□□□ -0.7
GGA3-206ENST00000578773 KLHL35Q6PF15 583 aa10.65□□□□□ -0.7
GGA3-206ENST00000578773 CEP128Q6ZU80 1094 aa10.65□□□□□ -0.7
GGA3-206ENST00000578773 RPRMLQ8N4K4 120 aa10.65□□□□□ -0.7
GGA3-206ENST00000578773 ZNF655Q8N720 491 aaPredicted RBP10.65□□□□□ -0.7
GGA3-206ENST00000578773 LPCAT1Q8NF37 534 aa10.65□□□□□ -0.7
GGA3-206ENST00000578773 OR4E2Q8NGC2 313 aa10.65□□□□□ -0.7
GGA3-206ENST00000578773 CPLX3Q8WVH0 158 aa10.65□□□□□ -0.7
GGA3-206ENST00000578773 GLYATL1Q969I3 302 aa10.65□□□□□ -0.7
GGA3-206ENST00000578773 ZNF653Q96CK0 615 aa10.65□□□□□ -0.7
GGA3-206ENST00000578773 GPR137Q96N19 417 aa10.65□□□□□ -0.7
GGA3-206ENST00000578773 ZNF395Q9H8N7 513 aaPredicted RBP10.65□□□□□ -0.7
GGA3-206ENST00000578773 NT5MQ9NPB1 228 aa10.65□□□□□ -0.7
GGA3-206ENST00000578773 SERTAD3Q9UJW9 196 aa10.65□□□□□ -0.7
GGA3-206ENST00000578773 CTNND2Q9UQB3 1225 aa10.65□□□□□ -0.7
GGA3-206ENST00000578773 DYTNA2CJ06 578 aa10.64□□□□□ -0.71
GGA3-206ENST00000578773 GSAPA4D1B5 854 aa10.64□□□□□ -0.71
GGA3-206ENST00000578773 BTN3A3O00478 584 aa10.64□□□□□ -0.71
GGA3-206ENST00000578773 BTN3A1O00481 513 aa10.64□□□□□ -0.71
GGA3-206ENST00000578773 GPR39O43194 453 aa10.64□□□□□ -0.71
GGA3-206ENST00000578773 MAFKO60675 156 aa10.64□□□□□ -0.71
GGA3-206ENST00000578773 MSL3P1P0C860 447 aa10.64□□□□□ -0.71
GGA3-206ENST00000578773 MMP8P22894 467 aa10.64□□□□□ -0.71
GGA3-206ENST00000578773 PBLDP30039 288 aaPredicted RBP10.64□□□□□ -0.71
GGA3-206ENST00000578773 HALP42357 657 aa10.64□□□□□ -0.71
GGA3-206ENST00000578773 CTSCP53634 463 aa10.64□□□□□ -0.71
GGA3-206ENST00000578773 EPHB1P54762 984 aa10.64□□□□□ -0.71
GGA3-206ENST00000578773 DLX5P56178 289 aa10.64□□□□□ -0.71
GGA3-206ENST00000578773 OLIG2Q13516 323 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms