RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 AMD1P17707 334 aa21.66■■□□□ 1.06
SMARCD2-206ENST00000577990 ITGB6P18564 788 aa21.66■■□□□ 1.06
SMARCD2-206ENST00000577990 OGNP20774 298 aaKnown RBP21.66■■□□□ 1.06
SMARCD2-206ENST00000577990 ITPKBP27987 946 aa21.66■■□□□ 1.06
SMARCD2-206ENST00000577990 RBMS1P29558 406 aaKnown RBP21.66■■□□□ 1.06
SMARCD2-206ENST00000577990 PDHA2P29803 388 aa21.66■■□□□ 1.06
SMARCD2-206ENST00000577990 CD151P48509 253 aa21.66■■□□□ 1.06
SMARCD2-206ENST00000577990 DHX9Q08211 1270 aaKnown RBP21.66■■□□□ 1.06
SMARCD2-206ENST00000577990 BOP1Q14137 746 aaKnown RBP21.66■■□□□ 1.06
SMARCD2-206ENST00000577990 C16orf72Q14CZ0 275 aa21.66■■□□□ 1.06
SMARCD2-206ENST00000577990 TYSND1Q2T9J0 566 aa21.66■■□□□ 1.06
SMARCD2-206ENST00000577990 SYTL3Q4VX76 610 aa21.66■■□□□ 1.06
SMARCD2-206ENST00000577990 RNF187Q5TA31 235 aaPredicted RBP21.66■■□□□ 1.06
SMARCD2-206ENST00000577990 HIBCHQ6NVY1 386 aaPredicted RBP21.66■■□□□ 1.06
SMARCD2-206ENST00000577990 NEPROQ6NW34 567 aa21.66■■□□□ 1.06
SMARCD2-206ENST00000577990 LRRC6Q86X45 466 aa21.66■■□□□ 1.06
SMARCD2-206ENST00000577990 CMKLR1Q99788 373 aa21.66■■□□□ 1.06
SMARCD2-206ENST00000577990 P2RY12Q9H244 342 aa21.66■■□□□ 1.06
SMARCD2-206ENST00000577990 AKAP7Q9P0M2 348 aaPredicted RBP21.66■■□□□ 1.06
SMARCD2-206ENST00000577990 PDP2Q9P2J9 529 aa21.66■■□□□ 1.06
SMARCD2-206ENST00000577990 GNPTGQ9UJJ9 305 aa21.66■■□□□ 1.06
SMARCD2-206ENST00000577990 COLEC10Q9Y6Z7 277 aa21.66■■□□□ 1.06
SMARCD2-206ENST00000577990 MN1Q10571 1320 aaPredicted RBP21.65■■□□□ 1.06
SMARCD2-206ENST00000577990 FAM187AA6NFU0 413 aa21.65■■□□□ 1.06
SMARCD2-206ENST00000577990 HGFP14210 728 aa21.65■■□□□ 1.06
SMARCD2-206ENST00000577990 PGAM1P18669 254 aa21.65■■□□□ 1.06
SMARCD2-206ENST00000577990 RPS3P23396 243 aaKnown RBP eCLIP21.65■■□□□ 1.061e-10■■□□□ 13.4
SMARCD2-206ENST00000577990 NDUFS1P28331 727 aa21.65■■□□□ 1.06
SMARCD2-206ENST00000577990 MLLT3P42568 568 aaPredicted RBP21.65■■□□□ 1.06
SMARCD2-206ENST00000577990 CAPZBP47756 277 aa21.65■■□□□ 1.06
SMARCD2-206ENST00000577990 ITGA8P53708 1063 aa21.65■■□□□ 1.06
SMARCD2-206ENST00000577990 PLCL1Q15111 1095 aa21.65■■□□□ 1.06
SMARCD2-206ENST00000577990 TBC1D25Q3MII6 688 aa21.65■■□□□ 1.06
SMARCD2-206ENST00000577990 BBS9Q3SYG4 887 aa21.65■■□□□ 1.06
SMARCD2-206ENST00000577990 MAATS1Q7Z4T9 603 aa21.65■■□□□ 1.06
SMARCD2-206ENST00000577990 PLXDC1Q8IUK5 500 aa21.65■■□□□ 1.06
SMARCD2-206ENST00000577990 RCBTB1Q8NDN9 531 aa21.65■■□□□ 1.06
SMARCD2-206ENST00000577990 LKAAEAR1Q8TD35 194 aa21.65■■□□□ 1.06
SMARCD2-206ENST00000577990 ZFPM2Q8WW38 1151 aa21.65■■□□□ 1.06
SMARCD2-206ENST00000577990 RSC1A1Q92681 617 aa21.65■■□□□ 1.06
SMARCD2-206ENST00000577990 TRIM44Q96DX7 344 aaPredicted RBP21.65■■□□□ 1.06
SMARCD2-206ENST00000577990 ZNF578Q96N58 590 aaPredicted RBP21.65■■□□□ 1.06
SMARCD2-206ENST00000577990 SLC46A1Q96NT5 459 aa21.65■■□□□ 1.06
SMARCD2-206ENST00000577990 TCF12Q99081 682 aa21.65■■□□□ 1.06
SMARCD2-206ENST00000577990 CARD6Q9BX69 1037 aa21.65■■□□□ 1.06
SMARCD2-206ENST00000577990 ASCL3Q9NQ33 180 aa21.65■■□□□ 1.06
SMARCD2-206ENST00000577990 IL1RAPL1Q9NZN1 696 aa21.65■■□□□ 1.06
SMARCD2-206ENST00000577990 UBA6A0AVT1 1052 aaPredicted RBP21.64■■□□□ 1.05
SMARCD2-206ENST00000577990 SLC5A10A0PJK1 596 aa21.64■■□□□ 1.05
SMARCD2-206ENST00000577990 AGRPO00253 132 aa21.64■■□□□ 1.05
SMARCD2-206ENST00000577990 BANF1O75531 89 aa21.64■■□□□ 1.05
SMARCD2-206ENST00000577990 TNFSF15O95150 251 aa21.64■■□□□ 1.05
SMARCD2-206ENST00000577990 JMJD7P0C870 316 aa21.64■■□□□ 1.05
SMARCD2-206ENST00000577990 EIF2S3P41091 472 aaKnown RBP21.64■■□□□ 1.05
SMARCD2-206ENST00000577990 EIF3BP55884 814 aaKnown RBP21.64■■□□□ 1.05
SMARCD2-206ENST00000577990 MRPS25P82663 173 aaKnown RBP21.64■■□□□ 1.05
SMARCD2-206ENST00000577990 PLOD1Q02809 727 aaPredicted RBP21.64■■□□□ 1.05
SMARCD2-206ENST00000577990 THOC5Q13769 683 aaKnown RBP21.64■■□□□ 1.05
SMARCD2-206ENST00000577990 KRT33BQ14525 404 aa21.64■■□□□ 1.05
SMARCD2-206ENST00000577990 BRD3Q15059 726 aa21.64■■□□□ 1.05
SMARCD2-206ENST00000577990 LONRF1Q17RB8 773 aa21.64■■□□□ 1.05
SMARCD2-206ENST00000577990 MSS51Q4VC12 460 aa21.64■■□□□ 1.05
SMARCD2-206ENST00000577990 SNAP47Q5SQN1 464 aa21.64■■□□□ 1.05
SMARCD2-206ENST00000577990 PTRHD1Q6GMV3 140 aaKnown RBP21.64■■□□□ 1.05
SMARCD2-206ENST00000577990 NAPRTQ6XQN6 538 aa21.64■■□□□ 1.05
SMARCD2-206ENST00000577990 ZNF572Q7Z3I7 529 aaPredicted RBP21.64■■□□□ 1.05
SMARCD2-206ENST00000577990 CILP2Q8IUL8 1156 aa21.64■■□□□ 1.05
SMARCD2-206ENST00000577990 PDIK1LQ8N165 341 aa21.64■■□□□ 1.05
SMARCD2-206ENST00000577990 JPH3Q8WXH2 748 aaPredicted RBP21.64■■□□□ 1.05
SMARCD2-206ENST00000577990 LPGAT1Q92604 370 aa21.64■■□□□ 1.05
SMARCD2-206ENST00000577990 EBNA1BP2Q99848 306 aaKnown RBP21.64■■□□□ 1.05
SMARCD2-206ENST00000577990 KIR3DX1Q9H7L2 352 aa21.64■■□□□ 1.05
SMARCD2-206ENST00000577990 THSD1Q9NS62 852 aa21.64■■□□□ 1.05
SMARCD2-206ENST00000577990 CDC23Q9UJX2 597 aa21.64■■□□□ 1.05
SMARCD2-206ENST00000577990 IQCF5A8MTL0 148 aa21.63■■□□□ 1.05
SMARCD2-206ENST00000577990 NDC80O14777 642 aa21.63■■□□□ 1.05
SMARCD2-206ENST00000577990 RAD51CO43502 376 aa21.63■■□□□ 1.05
SMARCD2-206ENST00000577990 ITGA2BP08514 1039 aa21.63■■□□□ 1.05
SMARCD2-206ENST00000577990 CCR7P32248 378 aa21.63■■□□□ 1.05
SMARCD2-206ENST00000577990 ABCG1P45844 678 aa21.63■■□□□ 1.05
SMARCD2-206ENST00000577990 RPL21P46778 160 aaKnown RBP21.63■■□□□ 1.05
SMARCD2-206ENST00000577990 GFERP55789 205 aa21.63■■□□□ 1.05
SMARCD2-206ENST00000577990 ERVPABLB-1P60509 514 aa21.63■■□□□ 1.05
SMARCD2-206ENST00000577990 CKAP4Q07065 602 aaKnown RBP21.63■■□□□ 1.05
SMARCD2-206ENST00000577990 ZNF470Q6ECI4 717 aa21.63■■□□□ 1.05
SMARCD2-206ENST00000577990 KRT222Q8N1A0 295 aa21.63■■□□□ 1.05
SMARCD2-206ENST00000577990 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.63■■□□□ 1.05
SMARCD2-206ENST00000577990 PWWP2AQ96N64 755 aa21.63■■□□□ 1.05
SMARCD2-206ENST00000577990 PANX3Q96QZ0 392 aa21.63■■□□□ 1.05
SMARCD2-206ENST00000577990 FERD3LQ96RJ6 166 aa21.63■■□□□ 1.05
SMARCD2-206ENST00000577990 NAT9Q9BTE0 207 aa21.63■■□□□ 1.05
SMARCD2-206ENST00000577990 C20orf96Q9NUD7 363 aaPredicted RBP21.63■■□□□ 1.05
SMARCD2-206ENST00000577990 PISDQ9UG56 409 aa21.63■■□□□ 1.05
SMARCD2-206ENST00000577990 KLHL3Q9UH77 587 aa21.63■■□□□ 1.05
SMARCD2-206ENST00000577990 SLC24A2Q9UI40 661 aa21.63■■□□□ 1.05
SMARCD2-206ENST00000577990 VPS9D1Q9Y2B5 631 aa21.63■■□□□ 1.05
SMARCD2-206ENST00000577990 SNX24Q9Y343 169 aa21.63■■□□□ 1.05
SMARCD2-206ENST00000577990 FAM169AQ9Y6X4 670 aa21.63■■□□□ 1.05
SMARCD2-206ENST00000577990 FASNP49327 2511 aaKnown RBP21.63■■□□□ 1.05
SMARCD2-206ENST00000577990 MGAQ8IWI9 3026 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms