RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 ITGB1BP2Q9UKP3 347 aa9.82□□□□□ -0.84
NPLOC4-220ENST00000576940 PTRH2Q9Y3E5 179 aaKnown RBP9.82□□□□□ -0.84
NPLOC4-220ENST00000576940 SETD2Q9BYW2 2564 aaPredicted RBP9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 SVILO95425 2214 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 GSAPA4D1B5 854 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 C9J4A7 227 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 E7EQ34 232 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 BTN3A3O00478 584 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 PEX12O00623 359 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 E2F3O00716 465 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 PMPCBO75439 489 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 PVRP15151 417 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 HLA-DPA1P20036 260 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 HMGCLP35914 325 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 HADHAP40939 763 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 PER3P56645 1201 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 MYL5Q02045 173 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 PRKAA1Q13131 559 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 KRT33BQ14525 404 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 PTPRCAPQ14761 206 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 SLC9A5Q14940 896 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 PDK2Q15119 407 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 PPP2R5EQ16537 467 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 GPRC6AQ5T6X5 926 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 CCDC70Q6NSX1 233 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 ZC3H18Q86VM9 953 aaKnown RBP9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 CFAP206Q8IYR0 622 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 CARFQ8N187 725 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 LILRA3Q8N6C8 439 aaPredicted RBP9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 DNAJB14Q8TBM8 379 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 GRHL3Q8TE85 626 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 ZFPM2Q8WW38 1151 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 TM9SF4Q92544 642 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 RAPGEF5Q92565 580 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 TADA1Q96BN2 335 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 FAF2Q96CS3 445 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 TRAPPC9Q96Q05 1148 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 ZNF670Q9BS34 389 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 XPO4Q9C0E2 1151 aaKnown RBP9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 SPRTNQ9H040 489 aaPredicted RBP9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 SLC25A51Q9H1U9 297 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 KIR3DX1Q9H7L2 352 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 ATP13A2Q9NQ11 1180 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 POMT2Q9UKY4 750 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 PADI2Q9Y2J8 665 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 HEY1Q9Y5J3 304 aa9.81□□□□□ -0.84
NPLOC4-220ENST00000576940 CCDC78A2IDD5 438 aa9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 MGAT4DA6NG13 374 aa9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 HCRTR1O43613 425 aa9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 CNOT3O75175 753 aaKnown RBP9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 ALOX12BO75342 701 aa9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 IPO13O94829 963 aaKnown RBP9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 NDST3O95803 873 aa9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 CTSBP07858 339 aa9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 EDN3P14138 238 aa9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 KDELR1P24390 212 aa9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 SPAM1P38567 509 aa9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 FOLR3P41439 243 aa9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 SOX8P57073 446 aa9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 ZXDCQ2QGD7 858 aaPredicted RBP9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 LDLRAP1Q5SW96 308 aa9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 ZFYVE27Q5T4F4 411 aa9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 NPNTQ6UXI9 565 aa9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 CDHR3Q6ZTQ4 885 aa9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 PPP1R32Q7Z5V6 425 aa9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 MAP7D3Q8IWC1 876 aa9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 SLC25A41Q8N5S1 370 aa9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 PLD5Q8N7P1 536 aa9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 DDHD1Q8NEL9 900 aa9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 FAR1Q8WVX9 515 aa9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 LCN9Q8WX39 176 aa9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 PTERQ96BW5 349 aa9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 RMDN2Q96LZ7 410 aa9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 IP6K3Q96PC2 410 aa9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 RNF157Q96PX1 679 aa9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 FERD3LQ96RJ6 166 aa9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 DPH2Q9BQC3 489 aaPredicted RBP9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 DHRS4Q9BTZ2 278 aa9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 SYTL2Q9HCH5 934 aa9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 FAM60AQ9NP50 221 aa9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 RTN4Q9NQC3 1192 aaKnown RBP9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 IL17CQ9P0M4 197 aa9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 COPG2Q9UBF2 871 aa9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 GPN3Q9UHW5 284 aaPredicted RBP9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 ACSL5Q9ULC5 683 aa9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 NOVA2Q9UNW9 492 aaKnown RBP9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 CDYLQ9Y232 598 aa9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 COLEC10Q9Y6Z7 277 aa9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 CELSR1Q9NYQ6 3014 aa9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 MYO7BQ6PIF6 2116 aa9.8□□□□□ -0.84
NPLOC4-220ENST00000576940 CNTRLQ7Z7A1 2325 aa9.79□□□□□ -0.84
NPLOC4-220ENST00000576940 GLYATL1P3A0A0U1RQE8 302 aa9.79□□□□□ -0.84
NPLOC4-220ENST00000576940 BTN3A1O00481 513 aa9.79□□□□□ -0.84
NPLOC4-220ENST00000576940 GAPDHSO14556 408 aaPredicted RBP9.79□□□□□ -0.84
NPLOC4-220ENST00000576940 CYP1A2P05177 515 aa9.79□□□□□ -0.84
NPLOC4-220ENST00000576940 UMODP07911 640 aa9.79□□□□□ -0.84
NPLOC4-220ENST00000576940 SNRPB2P08579 225 aaKnown RBP9.79□□□□□ -0.84
NPLOC4-220ENST00000576940 HBQ1P09105 142 aa9.79□□□□□ -0.84
NPLOC4-220ENST00000576940 MSH3P20585 1137 aa9.79□□□□□ -0.84
NPLOC4-220ENST00000576940 ITGA3P26006 1051 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms