RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 NAP1L3Q99457 506 aaPredicted RBP8.46□□□□□ -1.06
SMG6-216ENST00000575176 SLC38A3Q99624 504 aa8.46□□□□□ -1.06
SMG6-216ENST00000575176 CCM2Q9BSQ5 444 aa8.46□□□□□ -1.06
SMG6-216ENST00000575176 B3GNT4Q9C0J1 378 aa8.46□□□□□ -1.06
SMG6-216ENST00000575176 EPB41L1Q9H4G0 881 aa8.46□□□□□ -1.06
SMG6-216ENST00000575176 ZNF768Q9H5H4 540 aaKnown RBP8.46□□□□□ -1.06
SMG6-216ENST00000575176 PRORYQ9H606 182 aa8.46□□□□□ -1.06
SMG6-216ENST00000575176 APMAPQ9HDC9 416 aa8.46□□□□□ -1.06
SMG6-216ENST00000575176 CATSPERZQ9NTU4 200 aa8.46□□□□□ -1.06
SMG6-216ENST00000575176 FAM8A1Q9UBU6 413 aa8.46□□□□□ -1.06
SMG6-216ENST00000575176 PISDQ9UG56 409 aa8.46□□□□□ -1.06
SMG6-216ENST00000575176 ACSL5Q9ULC5 683 aa8.46□□□□□ -1.06
SMG6-216ENST00000575176 ICKQ9UPZ9 632 aa8.46□□□□□ -1.06
SMG6-216ENST00000575176 AK5Q9Y6K8 562 aa8.46□□□□□ -1.06
SMG6-216ENST00000575176 HELZ2Q9BYK8 2649 aaKnown RBP8.45□□□□□ -1.06
SMG6-216ENST00000575176 IGHV5-51A0A0C4DH38 117 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 KRT87PA6NCN2 255 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 B4E171 279 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 H3BMH7 237 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 GOLGA8MH3BSY2 632 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 BTN3A3O00478 584 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 TERTO14746 1132 aaKnown RBP8.45□□□□□ -1.06
SMG6-216ENST00000575176 NVLO15381 856 aaKnown RBP8.45□□□□□ -1.06
SMG6-216ENST00000575176 CAPN5O15484 640 aaPredicted RBP8.45□□□□□ -1.06
SMG6-216ENST00000575176 TTI1O43156 1089 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 SEC31AO94979 1220 aaKnown RBP8.45□□□□□ -1.06
SMG6-216ENST00000575176 VAPBO95292 243 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 DLGAP3O95886 979 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 VIPP01282 170 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 C1QAP02745 245 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 GSTM1P09488 218 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 TYRP1P17643 537 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 AOAHP28039 575 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 ACTN2P35609 894 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 TSPAN7P41732 249 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 CD151P48509 253 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 KPNA2P52292 529 aaKnown RBP8.45□□□□□ -1.06
SMG6-216ENST00000575176 ADARP55265 1226 aaKnown RBP8.45□□□□□ -1.06
SMG6-216ENST00000575176 ETF1P62495 437 aaKnown RBP8.45□□□□□ -1.06
SMG6-216ENST00000575176 GSTM4Q03013 218 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 RPA4Q13156 261 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 TGIF1Q15583 401 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 ANKRD20A4Q4UJ75 823 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 PHF19Q5T6S3 580 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 KIAA1614Q5VZ46 1190 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 HIBCHQ6NVY1 386 aaPredicted RBP8.45□□□□□ -1.06
SMG6-216ENST00000575176 CILP2Q8IUL8 1156 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 SLC22A15Q8IZD6 547 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 LSMEM2Q8N112 164 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 KRT222Q8N1A0 295 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 FBXO39Q8N4B4 442 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 OR5AR1Q8NGP9 310 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 OR10G6Q8NH81 332 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 KLHL6Q8WZ60 621 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 TMEM159Q96B96 161 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 SH3KBP1Q96B97 665 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 SLC41A2Q96JW4 573 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 C12orf66Q96MD2 445 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 SLC30A3Q99726 388 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 DPYSL5Q9BPU6 564 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 MCMBPQ9BTE3 642 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.45□□□□□ -1.06
SMG6-216ENST00000575176 PITPNM3Q9BZ71 974 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 XAB2Q9HCS7 855 aaKnown RBP8.45□□□□□ -1.06
SMG6-216ENST00000575176 THSD1Q9NS62 852 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 IMP3Q9NV31 184 aaKnown RBP8.45□□□□□ -1.06
SMG6-216ENST00000575176 GALPQ9UBC7 116 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 B3GALT1Q9Y5Z6 326 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 SAR1BQ9Y6B6 198 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 ANKRD12Q6UB98 2062 aa8.45□□□□□ -1.06
SMG6-216ENST00000575176 UBR5O95071 2799 aaPredicted RBP8.44□□□□□ -1.06
SMG6-216ENST00000575176 CCDC88CQ9P219 2028 aa8.44□□□□□ -1.06
SMG6-216ENST00000575176 CFAP99D6REC4 459 aa8.44□□□□□ -1.06
SMG6-216ENST00000575176 E7ESA3 106 aa8.44□□□□□ -1.06
SMG6-216ENST00000575176 TMX2-CTNND1H3BSU7 103 aa8.44□□□□□ -1.06
SMG6-216ENST00000575176 AGRPO00253 132 aa8.44□□□□□ -1.06
SMG6-216ENST00000575176 BTN3A1O00481 513 aa8.44□□□□□ -1.06
SMG6-216ENST00000575176 PRMT5O14744 637 aaPredicted RBP8.44□□□□□ -1.06
SMG6-216ENST00000575176 LIN7AO14910 233 aaPredicted RBP8.44□□□□□ -1.06
SMG6-216ENST00000575176 CD3EAPO15446 510 aaKnown RBP8.44□□□□□ -1.06
SMG6-216ENST00000575176 USP1O94782 785 aa8.44□□□□□ -1.06
SMG6-216ENST00000575176 SLCO2B1O94956 709 aa8.44□□□□□ -1.06
SMG6-216ENST00000575176 TIAF1O95411 115 aa8.44□□□□□ -1.06
SMG6-216ENST00000575176 S1PR4O95977 384 aa8.44□□□□□ -1.06
SMG6-216ENST00000575176 SLC35G4P0C7Q5 338 aa8.44□□□□□ -1.06
SMG6-216ENST00000575176 VCLP18206 1134 aa8.44□□□□□ -1.06
SMG6-216ENST00000575176 OGNP20774 298 aaKnown RBP8.44□□□□□ -1.06
SMG6-216ENST00000575176 GABRB3P28472 473 aa8.44□□□□□ -1.06
SMG6-216ENST00000575176 SLC1A2P43004 574 aa8.44□□□□□ -1.06
SMG6-216ENST00000575176 RPL21P46778 160 aaKnown RBP8.44□□□□□ -1.06
SMG6-216ENST00000575176 GABRA4P48169 554 aa8.44□□□□□ -1.06
SMG6-216ENST00000575176 LMAN1P49257 510 aa8.44□□□□□ -1.06
SMG6-216ENST00000575176 SH3BP2P78314 561 aa8.44□□□□□ -1.06
SMG6-216ENST00000575176 MRPS25P82663 173 aaKnown RBP8.44□□□□□ -1.06
SMG6-216ENST00000575176 MC2RQ01718 297 aa8.44□□□□□ -1.06
SMG6-216ENST00000575176 DHX9Q08211 1270 aaKnown RBP8.44□□□□□ -1.06
SMG6-216ENST00000575176 LAMB3Q13751 1172 aa8.44□□□□□ -1.06
SMG6-216ENST00000575176 CRYMQ14894 314 aa8.44□□□□□ -1.06
SMG6-216ENST00000575176 FASTKD3Q14CZ7 662 aaKnown RBP8.44□□□□□ -1.06
SMG6-216ENST00000575176 IZUMO3Q5VZ72 239 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms