RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 PIKFYVEQ9Y2I7 2098 aa13.41□□□□□ -0.26
CCDC40-209ENST00000573474 TMEM221A6NGB7 291 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 H0Y8X5 98 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 H3BM21 787 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 STX16-NPEPL1H3BU86 382 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 GFYI3L273 518 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 M0R296 226 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 STX16O14662 325 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 MAP3K13O43283 966 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 NPHS1O60500 1241 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 MATN4O95460 622 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 FUCA1P04066 466 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 VCLP18206 1134 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 CD27P26842 260 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 SERPINB5P36952 375 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 HK3P52790 923 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 THOP1P52888 689 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 ALDH18A1P54886 795 aaKnown RBP13.4□□□□□ -0.26
CCDC40-209ENST00000573474 ABCE1P61221 599 aaKnown RBP13.4□□□□□ -0.26
CCDC40-209ENST00000573474 OCRLQ01968 901 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 ABRQ12979 859 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 TGFBIQ15582 683 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 PPP1R3AQ16821 1122 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 PFKFB4Q16877 469 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 PLA2G4EQ3MJ16 856 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 PYCR3Q53H96 274 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 CFAP157Q5JU67 520 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 CDKL4Q5MAI5 379 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 ENPP7Q6UWV6 458 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 Q6ZSR6 202 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 UBE2R2Q712K3 238 aaPredicted RBP13.4□□□□□ -0.26
CCDC40-209ENST00000573474 RASGRP3Q8IV61 690 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 LILRA3Q8N6C8 439 aaPredicted RBP13.4□□□□□ -0.26
CCDC40-209ENST00000573474 CCNYL1Q8N7R7 359 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 BCAS4Q8TDM0 211 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 SNX19Q92543 992 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 GRAMD1AQ96CP6 724 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 L3HYPDHQ96EM0 354 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 CNDP1Q96KN2 507 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 C7orf26Q96N11 449 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 FOPNLQ96NB1 174 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 DRC3Q9H069 523 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 DPEP2Q9H4A9 486 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 RABEP2Q9H5N1 569 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 SLC23A2Q9UGH3 650 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 MOSPD1Q9UJG1 213 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 SUFUQ9UMX1 484 aa13.4□□□□□ -0.26
CCDC40-209ENST00000573474 PRSS38A1L453 326 aa13.39□□□□□ -0.27
CCDC40-209ENST00000573474 NCF1BA6NI72 391 aaPredicted RBP13.39□□□□□ -0.27
CCDC40-209ENST00000573474 NCF1CA8MVU1 366 aaPredicted RBP13.39□□□□□ -0.27
CCDC40-209ENST00000573474 FFAR2O15552 330 aa13.39□□□□□ -0.27
CCDC40-209ENST00000573474 ITM2AO43736 263 aa13.39□□□□□ -0.27
CCDC40-209ENST00000573474 SNUPNO95149 360 aaKnown RBP13.39□□□□□ -0.27
CCDC40-209ENST00000573474 NCF1P14598 390 aaPredicted RBP13.39□□□□□ -0.27
CCDC40-209ENST00000573474 CYP2A7P20853 494 aa13.39□□□□□ -0.27
CCDC40-209ENST00000573474 PDHA2P29803 388 aa13.39□□□□□ -0.27
CCDC40-209ENST00000573474 GNPDA1P46926 289 aa13.39□□□□□ -0.27
CCDC40-209ENST00000573474 NAA20P61599 178 aa13.39□□□□□ -0.27
CCDC40-209ENST00000573474 HERVK_113P63132 956 aa13.39□□□□□ -0.27
CCDC40-209ENST00000573474 CDKL1Q00532 357 aa13.39□□□□□ -0.27
CCDC40-209ENST00000573474 RPL6Q02878 288 aaKnown RBP13.39□□□□□ -0.27
CCDC40-209ENST00000573474 DMPKQ09013 629 aa13.39□□□□□ -0.27
CCDC40-209ENST00000573474 RCN2Q14257 317 aa13.39□□□□□ -0.27
CCDC40-209ENST00000573474 PTK2BQ14289 1009 aa13.39□□□□□ -0.27
CCDC40-209ENST00000573474 NFE2L1Q14494 772 aa13.39□□□□□ -0.27
CCDC40-209ENST00000573474 PHKG1Q16816 387 aa13.39□□□□□ -0.27
CCDC40-209ENST00000573474 ZNF678Q5SXM1 525 aa13.39□□□□□ -0.27
CCDC40-209ENST00000573474 METRNLQ641Q3 311 aa13.39□□□□□ -0.27
CCDC40-209ENST00000573474 SULT1C3Q6IMI6 304 aa13.39□□□□□ -0.27
CCDC40-209ENST00000573474 XKR5Q6UX68 686 aa13.39□□□□□ -0.27
CCDC40-209ENST00000573474 FAM83HQ6ZRV2 1179 aaPredicted RBP13.39□□□□□ -0.27
CCDC40-209ENST00000573474 CHST15Q7LFX5 561 aaPredicted RBP13.39□□□□□ -0.27
CCDC40-209ENST00000573474 CRLF3Q8IUI8 442 aa13.39□□□□□ -0.27
CCDC40-209ENST00000573474 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.39□□□□□ -0.27
CCDC40-209ENST00000573474 OR13H1Q8NG92 308 aa13.39□□□□□ -0.27
CCDC40-209ENST00000573474 MCOLN3Q8TDD5 553 aa13.39□□□□□ -0.27
CCDC40-209ENST00000573474 PPP4R1Q8TF05 950 aa13.39□□□□□ -0.27
CCDC40-209ENST00000573474 OR1E3Q8WZA6 343 aa13.39□□□□□ -0.27
CCDC40-209ENST00000573474 DLG3Q92796 817 aa13.39□□□□□ -0.27
CCDC40-209ENST00000573474 TMEM237Q96Q45 408 aa13.39□□□□□ -0.27
CCDC40-209ENST00000573474 ORAI3Q9BRQ5 295 aa13.39□□□□□ -0.27
CCDC40-209ENST00000573474 ERVK-6Q9BXR3 956 aa13.39□□□□□ -0.27
CCDC40-209ENST00000573474 FGF22Q9HCT0 170 aa13.39□□□□□ -0.27
CCDC40-209ENST00000573474 PRMT8Q9NR22 394 aaPredicted RBP13.39□□□□□ -0.27
CCDC40-209ENST00000573474 TM7SF3Q9NS93 570 aa13.39□□□□□ -0.27
CCDC40-209ENST00000573474 UTP6Q9NYH9 597 aaKnown RBP13.39□□□□□ -0.27
CCDC40-209ENST00000573474 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.39□□□□□ -0.27
CCDC40-209ENST00000573474 ACSL5Q9ULC5 683 aa13.39□□□□□ -0.27
CCDC40-209ENST00000573474 PDE10AQ9Y233 779 aa13.39□□□□□ -0.27
CCDC40-209ENST00000573474 GPSM3Q9Y4H4 160 aa13.39□□□□□ -0.27
CCDC40-209ENST00000573474 DOCK9Q9BZ29 2069 aa13.39□□□□□ -0.27
CCDC40-209ENST00000573474 PABPN1LA6NDY0 278 aaKnown RBP13.38□□□□□ -0.27
CCDC40-209ENST00000573474 NDUFAB1O14561 156 aa13.38□□□□□ -0.27
CCDC40-209ENST00000573474 LAMTOR5O43504 91 aa13.38□□□□□ -0.27
CCDC40-209ENST00000573474 PSIP1O75475 530 aaKnown RBP13.38□□□□□ -0.27
CCDC40-209ENST00000573474 TGDSO95455 350 aa13.38□□□□□ -0.27
CCDC40-209ENST00000573474 HSPA4LO95757 839 aa13.38□□□□□ -0.27
CCDC40-209ENST00000573474 CATP04040 527 aaKnown RBP13.38□□□□□ -0.27
CCDC40-209ENST00000573474 HIST1H2AGP0C0S8 130 aaPredicted RBP13.38□□□□□ -0.27
CCDC40-209ENST00000573474 ACP5P13686 325 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms