RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 MRNIPQ6NTE8 343 aa20.17■□□□□ 0.82
CHMP6-204ENST00000572778 IRGCQ6NXR0 463 aa20.17■□□□□ 0.82
CHMP6-204ENST00000572778 KLHL35Q6PF15 583 aa20.17■□□□□ 0.82
CHMP6-204ENST00000572778 SYT10Q6XYQ8 523 aa20.17■□□□□ 0.82
CHMP6-204ENST00000572778 PCGF5Q86SE9 256 aa20.17■□□□□ 0.82
CHMP6-204ENST00000572778 ZFPM2Q8WW38 1151 aa20.17■□□□□ 0.82
CHMP6-204ENST00000572778 KCNE4Q8WWG9 221 aa20.17■□□□□ 0.82
CHMP6-204ENST00000572778 ZNF669Q96BR6 464 aaPredicted RBP20.17■□□□□ 0.82
CHMP6-204ENST00000572778 ZDHHC12Q96GR4 267 aa20.17■□□□□ 0.82
CHMP6-204ENST00000572778 C9orf72Q96LT7 481 aa20.17■□□□□ 0.82
CHMP6-204ENST00000572778 TSSK1BQ9BXA7 367 aa20.17■□□□□ 0.82
CHMP6-204ENST00000572778 KIR3DX1Q9H7L2 352 aa20.17■□□□□ 0.82
CHMP6-204ENST00000572778 OCIAD1Q9NX40 245 aa20.17■□□□□ 0.82
CHMP6-204ENST00000572778 SLC24A2Q9UI40 661 aa20.17■□□□□ 0.82
CHMP6-204ENST00000572778 RPS6KL1Q9Y6S9 549 aa20.17■□□□□ 0.82
CHMP6-204ENST00000572778 MN1Q10571 1320 aaPredicted RBP20.17■□□□□ 0.82
CHMP6-204ENST00000572778 IQCF5A8MTL0 148 aa20.16■□□□□ 0.82
CHMP6-204ENST00000572778 PRAMEF10O60809 474 aa20.16■□□□□ 0.82
CHMP6-204ENST00000572778 RASSF9O75901 435 aa20.16■□□□□ 0.82
CHMP6-204ENST00000572778 C9P02748 559 aa20.16■□□□□ 0.82
CHMP6-204ENST00000572778 ITPKBP27987 946 aa20.16■□□□□ 0.82
CHMP6-204ENST00000572778 MAGEA3P43357 314 aa20.16■□□□□ 0.82
CHMP6-204ENST00000572778 LEPRP48357 1165 aaKnown RBP20.16■□□□□ 0.82
CHMP6-204ENST00000572778 CD151P48509 253 aa20.16■□□□□ 0.82
CHMP6-204ENST00000572778 CSE1LP55060 971 aaKnown RBP20.16■□□□□ 0.82
CHMP6-204ENST00000572778 TMEM164Q5U3C3 297 aa20.16■□□□□ 0.82
CHMP6-204ENST00000572778 PTRHD1Q6GMV3 140 aaKnown RBP20.16■□□□□ 0.82
CHMP6-204ENST00000572778 PHC3Q8NDX5 983 aa20.16■□□□□ 0.82
CHMP6-204ENST00000572778 TFGQ92734 400 aaPredicted RBP20.16■□□□□ 0.82
CHMP6-204ENST00000572778 FCRL3Q96P31 734 aaPredicted RBP20.16■□□□□ 0.82
CHMP6-204ENST00000572778 KRT12Q99456 494 aa20.16■□□□□ 0.82
CHMP6-204ENST00000572778 CARD6Q9BX69 1037 aa20.16■□□□□ 0.82
CHMP6-204ENST00000572778 WDR70Q9NW82 654 aa20.16■□□□□ 0.82
CHMP6-204ENST00000572778 IL1RAPL1Q9NZN1 696 aa20.16■□□□□ 0.82
CHMP6-204ENST00000572778 SLC5A10A0PJK1 596 aa20.15■□□□□ 0.82
CHMP6-204ENST00000572778 PFDN6O15212 129 aa20.15■□□□□ 0.82
CHMP6-204ENST00000572778 NVLO15381 856 aaKnown RBP20.15■□□□□ 0.82
CHMP6-204ENST00000572778 TTI1O43156 1089 aa20.15■□□□□ 0.82
CHMP6-204ENST00000572778 ABCG1P45844 678 aa20.15■□□□□ 0.82
CHMP6-204ENST00000572778 ARCN1P48444 511 aaKnown RBP20.15■□□□□ 0.82
CHMP6-204ENST00000572778 SEPHS1P49903 392 aa20.15■□□□□ 0.82
CHMP6-204ENST00000572778 FAM92BQ6ZTR7 304 aa20.15■□□□□ 0.82
CHMP6-204ENST00000572778 PDZD3Q86UT5 571 aa20.15■□□□□ 0.82
CHMP6-204ENST00000572778 HOOK3Q86VS8 718 aa20.15■□□□□ 0.82
CHMP6-204ENST00000572778 KRT222Q8N1A0 295 aa20.15■□□□□ 0.82
CHMP6-204ENST00000572778 ART4Q93070 314 aa20.15■□□□□ 0.82
CHMP6-204ENST00000572778 SIGLEC10Q96LC7 697 aa20.15■□□□□ 0.82
CHMP6-204ENST00000572778 TAAR9Q96RI9 348 aa20.15■□□□□ 0.82
CHMP6-204ENST00000572778 TRIM51Q9BSJ1 452 aa20.15■□□□□ 0.82
CHMP6-204ENST00000572778 HRASLS2Q9NWW9 162 aa20.15■□□□□ 0.82
CHMP6-204ENST00000572778 SLC39A1Q9NY26 324 aa20.15■□□□□ 0.82
CHMP6-204ENST00000572778 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.15■□□□□ 0.82
CHMP6-204ENST00000572778 EPHA6Q9UF33 1036 aa20.15■□□□□ 0.82
CHMP6-204ENST00000572778 APC2O95996 2303 aa20.15■□□□□ 0.82
CHMP6-204ENST00000572778 OR6C74A6NCV1 312 aa20.14■□□□□ 0.81
CHMP6-204ENST00000572778 C9orf172C9J069 976 aa20.14■□□□□ 0.81
CHMP6-204ENST00000572778 KLK10O43240 276 aa20.14■□□□□ 0.81
CHMP6-204ENST00000572778 IVDP26440 423 aa20.14■□□□□ 0.81
CHMP6-204ENST00000572778 CCR7P32248 378 aa20.14■□□□□ 0.81
CHMP6-204ENST00000572778 EIF3BP55884 814 aaKnown RBP20.14■□□□□ 0.81
CHMP6-204ENST00000572778 PLOD1Q02809 727 aaPredicted RBP20.14■□□□□ 0.81
CHMP6-204ENST00000572778 HSPA14Q0VDF9 509 aa20.14■□□□□ 0.81
CHMP6-204ENST00000572778 PRKG2Q13237 762 aa20.14■□□□□ 0.81
CHMP6-204ENST00000572778 THOC5Q13769 683 aaKnown RBP20.14■□□□□ 0.81
CHMP6-204ENST00000572778 COL28A1Q2UY09 1125 aa20.14■□□□□ 0.81
CHMP6-204ENST00000572778 CACHD1Q5VU97 1274 aa20.14■□□□□ 0.81
CHMP6-204ENST00000572778 NEPROQ6NW34 567 aa20.14■□□□□ 0.81
CHMP6-204ENST00000572778 ARMC6Q6NXE6 501 aa20.14■□□□□ 0.81
CHMP6-204ENST00000572778 TMEM135Q86UB9 458 aa20.14■□□□□ 0.81
CHMP6-204ENST00000572778 OOSP2Q86WS3 158 aa20.14■□□□□ 0.81
CHMP6-204ENST00000572778 SPACA3Q8IXA5 215 aa20.14■□□□□ 0.81
CHMP6-204ENST00000572778 AGGF1Q8N302 714 aaeCLIP20.14■□□□□ 0.81
CHMP6-204ENST00000572778 ACVR1CQ8NER5 493 aa20.14■□□□□ 0.81
CHMP6-204ENST00000572778 OR4E2Q8NGC2 313 aa20.14■□□□□ 0.81
CHMP6-204ENST00000572778 LKAAEAR1Q8TD35 194 aa20.14■□□□□ 0.81
CHMP6-204ENST00000572778 TRIM31Q9BZY9 425 aa20.14■□□□□ 0.81
CHMP6-204ENST00000572778 RAB33BQ9H082 229 aa20.14■□□□□ 0.81
CHMP6-204ENST00000572778 P2RY12Q9H244 342 aa20.14■□□□□ 0.81
CHMP6-204ENST00000572778 MVB12BQ9H7P6 319 aa20.14■□□□□ 0.81
CHMP6-204ENST00000572778 FOXJ2Q9P0K8 574 aa20.14■□□□□ 0.81
CHMP6-204ENST00000572778 GNPTGQ9UJJ9 305 aa20.14■□□□□ 0.81
CHMP6-204ENST00000572778 ASF1AQ9Y294 204 aa20.14■□□□□ 0.81
CHMP6-204ENST00000572778 DMXL2Q8TDJ6 3036 aa20.13■□□□□ 0.81
CHMP6-204ENST00000572778 OR5K3A6NET4 321 aa20.13■□□□□ 0.81
CHMP6-204ENST00000572778 B4E171 279 aa20.13■□□□□ 0.81
CHMP6-204ENST00000572778 KIF1CO43896 1103 aaKnown RBP20.13■□□□□ 0.81
CHMP6-204ENST00000572778 ANKRD34CP0C6C1 535 aa20.13■□□□□ 0.81
CHMP6-204ENST00000572778 OGNP20774 298 aaKnown RBP20.13■□□□□ 0.81
CHMP6-204ENST00000572778 RPS3P23396 243 aaKnown RBP eCLIP20.13■□□□□ 0.81
CHMP6-204ENST00000572778 FMO4P31512 558 aa20.13■□□□□ 0.81
CHMP6-204ENST00000572778 TSPAN7P41732 249 aa20.13■□□□□ 0.81
CHMP6-204ENST00000572778 PPP1CAP62136 330 aa20.13■□□□□ 0.81
CHMP6-204ENST00000572778 RNF187Q5TA31 235 aaPredicted RBP20.13■□□□□ 0.81
CHMP6-204ENST00000572778 LRRC6Q86X45 466 aa20.13■□□□□ 0.81
CHMP6-204ENST00000572778 ASZ1Q8WWH4 475 aa20.13■□□□□ 0.81
CHMP6-204ENST00000572778 LCN9Q8WX39 176 aa20.13■□□□□ 0.81
CHMP6-204ENST00000572778 STAMBPL1Q96FJ0 436 aa20.13■□□□□ 0.81
CHMP6-204ENST00000572778 PANX3Q96QZ0 392 aa20.13■□□□□ 0.81
CHMP6-204ENST00000572778 TCF12Q99081 682 aa20.13■□□□□ 0.81
CHMP6-204ENST00000572778 HGH1Q9BTY7 390 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms