RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 PHC3Q8NDX5 983 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 OR2L2Q8NH16 312 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 CPT1CQ8TCG5 803 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 DTX3LQ8TDB6 740 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 ZNF501Q96CX3 271 aaPredicted RBP8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 CLIP3Q96DZ5 547 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 DCUN1D1Q96GG9 259 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 FCRL4Q96PJ5 515 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 FERD3LQ96RJ6 166 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 CD180Q99467 661 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 VAT1Q99536 393 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 TUBB2BQ9BVA1 445 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 GPR87Q9BY21 358 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 MFRPQ9BY79 579 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 ING2Q9H160 280 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 GBA3Q9H227 469 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 XKR8Q9H6D3 395 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 KIR3DX1Q9H7L2 352 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 LRRC4CQ9HCJ2 640 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 SMOXQ9NWM0 555 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 CRLS1Q9UJA2 301 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 TRHDEQ9UKU6 1024 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 ACSL5Q9ULC5 683 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 INTUQ9ULD6 942 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 VPS4AQ9UN37 437 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 SNX7Q9UNH6 387 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 DNMT3AQ9Y6K1 912 aaPredicted RBP8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 SHANK1Q9Y566 2161 aa8.38□□□□□ -1.07
CTDNEP1-203ENST00000570385 CCDC88CQ9P219 2028 aa8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 CACNA1DQ01668 2161 aa8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 HACD1B0YJ81 288 aa8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 TMEM150CB9EJG8 249 aa8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 AKR1B15C9JRZ8 316 aaPredicted RBP8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 MEN1O00255 615 aa8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 BTN3A3O00478 584 aa8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 ZNF185O15231 689 aa8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 KCNN4O15554 427 aa8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 ANXA9O76027 345 aa8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 PREPP48147 710 aa8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 CD97P48960 835 aa8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 GEMP55040 296 aa8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 XIAPP98170 497 aa8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 OTUD4Q01804 1114 aaKnown RBP8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 PRKAA1Q13131 559 aa8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 PRKG2Q13237 762 aa8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 RAPSNQ13702 412 aa8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 LAMB3Q13751 1172 aa8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 TCEAL1Q15170 157 aa8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 C4orf17Q53FE4 359 aa8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 CAPRIN2Q6IMN6 1127 aaKnown RBP8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 AADACL2Q6P093 401 aa8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 RANBP10Q6VN20 620 aa8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 BBS12Q6ZW61 710 aa8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 TRIM73Q86UV7 250 aa8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 BPHLQ86WA6 291 aaPredicted RBP8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 ENDOVQ8N8Q3 282 aaKnown RBP8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 OR1L3Q8NH93 324 aa8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 CCDC110Q8TBZ0 833 aa8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 ACTL9Q8TC94 416 aa8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 LCN9Q8WX39 176 aa8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 THAP4Q8WY91 577 aa8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 RBM41Q96IZ5 413 aaKnown RBP8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 PSMG3-AS1Q96PY0 264 aa8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 SRMSQ9H3Y6 488 aa8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 PIH1D1Q9NWS0 290 aaKnown RBP8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 MAP10Q9P2G4 905 aa8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 POMT2Q9UKY4 750 aa8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 COLEC10Q9Y6Z7 277 aa8.37□□□□□ -1.07
CTDNEP1-203ENST00000570385 CCDC78A2IDD5 438 aa8.36□□□□□ -1.07
CTDNEP1-203ENST00000570385 C5orf60A6NFR6 353 aa8.36□□□□□ -1.07
CTDNEP1-203ENST00000570385 APOC4-APOC2K7ER74 178 aa8.36□□□□□ -1.07
CTDNEP1-203ENST00000570385 BTN3A1O00481 513 aa8.36□□□□□ -1.07
CTDNEP1-203ENST00000570385 TMEM63AO94886 807 aa8.36□□□□□ -1.07
CTDNEP1-203ENST00000570385 AGFG2O95081 481 aa8.36□□□□□ -1.07
CTDNEP1-203ENST00000570385 RECKO95980 971 aa8.36□□□□□ -1.07
CTDNEP1-203ENST00000570385 APOC2P02655 101 aa8.36□□□□□ -1.07
CTDNEP1-203ENST00000570385 RNF224P0DH78 156 aa8.36□□□□□ -1.07
CTDNEP1-203ENST00000570385 RALBP11234 206 aa8.36□□□□□ -1.07
CTDNEP1-203ENST00000570385 ST6GAL1P15907 406 aa8.36□□□□□ -1.07
CTDNEP1-203ENST00000570385 TPH1P17752 444 aa8.36□□□□□ -1.07
CTDNEP1-203ENST00000570385 CYP2A7P20853 494 aa8.36□□□□□ -1.07
CTDNEP1-203ENST00000570385 CTNNA2P26232 953 aa8.36□□□□□ -1.07
CTDNEP1-203ENST00000570385 PDHA2P29803 388 aa8.36□□□□□ -1.07
CTDNEP1-203ENST00000570385 PRDX3P30048 256 aaKnown RBP8.36□□□□□ -1.07
CTDNEP1-203ENST00000570385 ADRA1AP35348 466 aa8.36□□□□□ -1.07
CTDNEP1-203ENST00000570385 ITGA1P56199 1179 aa8.36□□□□□ -1.07
CTDNEP1-203ENST00000570385 FOXL2P58012 376 aa8.36□□□□□ -1.07
CTDNEP1-203ENST00000570385 EIF3EP60228 445 aaKnown RBP8.36□□□□□ -1.07
CTDNEP1-203ENST00000570385 PRPSAP1Q14558 356 aa8.36□□□□□ -1.07
CTDNEP1-203ENST00000570385 BCL7AQ4VC05 210 aa8.36□□□□□ -1.07
CTDNEP1-203ENST00000570385 ZRANB3Q5FWF4 1079 aa8.36□□□□□ -1.07
CTDNEP1-203ENST00000570385 ZNF789Q5FWF6 425 aa8.36□□□□□ -1.07
CTDNEP1-203ENST00000570385 ANKRD20A2Q5SQ80 823 aa8.36□□□□□ -1.07
CTDNEP1-203ENST00000570385 ANKRD20A1Q5TYW2 823 aa8.36□□□□□ -1.07
CTDNEP1-203ENST00000570385 ANKRD20A3Q5VUR7 823 aa8.36□□□□□ -1.07
CTDNEP1-203ENST00000570385 ITPRIPL1Q6GPH6 555 aa8.36□□□□□ -1.07
CTDNEP1-203ENST00000570385 DARS2Q6PI48 645 aaKnown RBP8.36□□□□□ -1.07
CTDNEP1-203ENST00000570385 TAS2R42Q7RTR8 314 aa8.36□□□□□ -1.07
CTDNEP1-203ENST00000570385 CNGA4Q8IV77 575 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms