RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 SMPD4Q9NXE4 827 aa16.85■□□□□ 0.29
VAC14-210ENST00000568548 PTBP2Q9UKA9 531 aaKnown RBP16.85■□□□□ 0.29
VAC14-210ENST00000568548 BLOC1S6Q9UL45 172 aa16.85■□□□□ 0.29
VAC14-210ENST00000568548 A0A0U1RQF3 1178 aa16.85■□□□□ 0.29
VAC14-210ENST00000568548 M0QZQ0 153 aa16.85■□□□□ 0.29
VAC14-210ENST00000568548 BNIP3LO60238 219 aa16.85■□□□□ 0.29
VAC14-210ENST00000568548 CBFA2T3O75081 653 aa16.85■□□□□ 0.29
VAC14-210ENST00000568548 ZNF623O75123 536 aa16.85■□□□□ 0.29
VAC14-210ENST00000568548 RPLP2P05387 115 aaKnown RBP16.85■□□□□ 0.29
VAC14-210ENST00000568548 FCGR1AP12314 374 aa16.85■□□□□ 0.29
VAC14-210ENST00000568548 PKMP14618 531 aaKnown RBP16.85■□□□□ 0.29
VAC14-210ENST00000568548 IDUAP35475 653 aa16.85■□□□□ 0.29
VAC14-210ENST00000568548 CD97P48960 835 aa16.85■□□□□ 0.29
VAC14-210ENST00000568548 EMX2Q04743 252 aa16.85■□□□□ 0.29
VAC14-210ENST00000568548 DAG1Q14118 895 aa16.85■□□□□ 0.29
VAC14-210ENST00000568548 DPY19L1Q2PZI1 675 aa16.85■□□□□ 0.29
VAC14-210ENST00000568548 CTXN3Q4LDR2 81 aa16.85■□□□□ 0.29
VAC14-210ENST00000568548 ATXN7L2Q5T6C5 722 aaPredicted RBP16.85■□□□□ 0.29
VAC14-210ENST00000568548 TMEM236Q5W0B7 351 aa16.85■□□□□ 0.29
VAC14-210ENST00000568548 FAM151BQ6UXP7 276 aa16.85■□□□□ 0.29
VAC14-210ENST00000568548 RSPO2Q6UXX9 243 aaPredicted RBP16.85■□□□□ 0.29
VAC14-210ENST00000568548 SPARTQ8N0X7 666 aa16.85■□□□□ 0.29
VAC14-210ENST00000568548 PCSK9Q8NBP7 692 aaKnown RBP16.85■□□□□ 0.29
VAC14-210ENST00000568548 OR2T12Q8NG77 320 aa16.85■□□□□ 0.29
VAC14-210ENST00000568548 FAM162AQ96A26 154 aa16.85■□□□□ 0.29
VAC14-210ENST00000568548 TM6SF2Q9BZW4 377 aa16.85■□□□□ 0.29
VAC14-210ENST00000568548 KLQ9UEF7 1012 aa16.85■□□□□ 0.29
VAC14-210ENST00000568548 BAG5Q9UL15 447 aa16.85■□□□□ 0.29
VAC14-210ENST00000568548 TRIM17Q9Y577 477 aa16.85■□□□□ 0.29
VAC14-210ENST00000568548 PRAMEF11O60813 436 aa16.84■□□□□ 0.29
VAC14-210ENST00000568548 PRSS23O95084 383 aa16.84■□□□□ 0.29
VAC14-210ENST00000568548 NDST3O95803 873 aa16.84■□□□□ 0.29
VAC14-210ENST00000568548 PRLP01236 227 aa16.84■□□□□ 0.29
VAC14-210ENST00000568548 MBL2P11226 248 aaPredicted RBP16.84■□□□□ 0.29
VAC14-210ENST00000568548 RPL17P18621 184 aaKnown RBP16.84■□□□□ 0.29
VAC14-210ENST00000568548 HTR1BP28222 390 aa16.84■□□□□ 0.29
VAC14-210ENST00000568548 IL10RBQ08334 325 aa16.84■□□□□ 0.29
VAC14-210ENST00000568548 CD47Q08722 323 aa16.84■□□□□ 0.29
VAC14-210ENST00000568548 ZNF773Q6PK81 442 aa16.84■□□□□ 0.29
VAC14-210ENST00000568548 C8orf59Q8N0T1 100 aaPredicted RBP16.84■□□□□ 0.29
VAC14-210ENST00000568548 RNF175Q8N4F7 328 aa16.84■□□□□ 0.29
VAC14-210ENST00000568548 OR13F1Q8NGS4 319 aa16.84■□□□□ 0.29
VAC14-210ENST00000568548 CD200R1Q8TD46 325 aa16.84■□□□□ 0.29
VAC14-210ENST00000568548 STON2Q8WXE9 905 aa16.84■□□□□ 0.29
VAC14-210ENST00000568548 SUSD3Q96L08 255 aa16.84■□□□□ 0.29
VAC14-210ENST00000568548 C1orf74Q96LT6 269 aa16.84■□□□□ 0.29
VAC14-210ENST00000568548 PAK1IP1Q9NWT1 392 aaPredicted RBP16.84■□□□□ 0.29
VAC14-210ENST00000568548 STX7O15400 261 aaKnown RBP16.84■□□□□ 0.29
VAC14-210ENST00000568548 VPS26AO75436 327 aa16.84■□□□□ 0.29
VAC14-210ENST00000568548 GJB5O95377 273 aa16.84■□□□□ 0.29
VAC14-210ENST00000568548 PORP16435 677 aaPredicted RBP16.84■□□□□ 0.29
VAC14-210ENST00000568548 HLA-DPA1P20036 260 aa16.84■□□□□ 0.29
VAC14-210ENST00000568548 NEK2P51955 445 aa16.84■□□□□ 0.29
VAC14-210ENST00000568548 FAM189BP81408 668 aa16.84■□□□□ 0.29
VAC14-210ENST00000568548 IL5RAQ01344 420 aa16.84■□□□□ 0.29
VAC14-210ENST00000568548 DSC3Q14574 896 aa16.84■□□□□ 0.29
VAC14-210ENST00000568548 SMN1Q16637 294 aaKnown RBP16.84■□□□□ 0.29
VAC14-210ENST00000568548 AASDHQ4L235 1098 aaPredicted RBP16.84■□□□□ 0.29
VAC14-210ENST00000568548 VARS2Q5ST30 1063 aaKnown RBP16.84■□□□□ 0.29
VAC14-210ENST00000568548 THAP5Q7Z6K1 395 aa16.84■□□□□ 0.29
VAC14-210ENST00000568548 TEX26Q8N6G2 289 aa16.84■□□□□ 0.29
VAC14-210ENST00000568548 TAMM41Q96BW9 452 aa16.84■□□□□ 0.29
VAC14-210ENST00000568548 HERC2P3Q9BVR0 1158 aa16.84■□□□□ 0.29
VAC14-210ENST00000568548 ALOXE3Q9BYJ1 711 aa16.84■□□□□ 0.29
VAC14-210ENST00000568548 CD320Q9NPF0 282 aa16.84■□□□□ 0.29
VAC14-210ENST00000568548 PCDHB9Q9Y5E1 797 aa16.84■□□□□ 0.29
VAC14-210ENST00000568548 DEAF1O75398 565 aaPredicted RBP16.83■□□□□ 0.29
VAC14-210ENST00000568548 CYP11A1P05108 521 aa16.83■□□□□ 0.29
VAC14-210ENST00000568548 ANXA6P08133 673 aa16.83■□□□□ 0.29
VAC14-210ENST00000568548 TACR2P21452 398 aa16.83■□□□□ 0.29
VAC14-210ENST00000568548 CRHBPP24387 322 aa16.83■□□□□ 0.29
VAC14-210ENST00000568548 ALDH3A2P51648 485 aa16.83■□□□□ 0.29
VAC14-210ENST00000568548 GTF2H3Q13889 308 aa16.83■□□□□ 0.29
VAC14-210ENST00000568548 MAPRE1Q15691 268 aaKnown RBP16.83■□□□□ 0.29
VAC14-210ENST00000568548 FAM98BQ52LJ0 330 aaKnown RBP16.83■□□□□ 0.29
VAC14-210ENST00000568548 PAGE2BQ5JRK9 111 aa16.83■□□□□ 0.29
VAC14-210ENST00000568548 ARMC12Q5T9G4 340 aa16.83■□□□□ 0.29
VAC14-210ENST00000568548 ZFAND4Q86XD8 727 aa16.83■□□□□ 0.29
VAC14-210ENST00000568548 BPIFB1Q8TDL5 484 aa16.83■□□□□ 0.29
VAC14-210ENST00000568548 GLMNQ92990 594 aa16.83■□□□□ 0.29
VAC14-210ENST00000568548 NRBF2Q96F24 287 aa16.83■□□□□ 0.29
VAC14-210ENST00000568548 HHIPL1Q96JK4 782 aa16.83■□□□□ 0.29
VAC14-210ENST00000568548 MIR1-1HGQ9H1L0 117 aa16.83■□□□□ 0.29
VAC14-210ENST00000568548 HPS4Q9NQG7 708 aa16.83■□□□□ 0.29
VAC14-210ENST00000568548 MRGBPQ9NV56 204 aa16.83■□□□□ 0.29
VAC14-210ENST00000568548 FAM118AQ9NWS6 357 aa16.83■□□□□ 0.29
VAC14-210ENST00000568548 SCML2Q9UQR0 700 aa16.83■□□□□ 0.29
VAC14-210ENST00000568548 FAM234BA2RU67 622 aa16.83■□□□□ 0.28
VAC14-210ENST00000568548 MYO1GB0I1T2 1018 aa16.83■□□□□ 0.28
VAC14-210ENST00000568548 BCAS1O75363 584 aaPredicted RBP16.83■□□□□ 0.28
VAC14-210ENST00000568548 ZNF140P52738 457 aaPredicted RBP16.83■□□□□ 0.28
VAC14-210ENST00000568548 VAC14Q08AM6 782 aa16.83■□□□□ 0.28
VAC14-210ENST00000568548 CPSF6Q16630 551 aaKnown RBP eCLIP16.83■□□□□ 0.28
VAC14-210ENST00000568548 MOGQ16653 247 aa16.83■□□□□ 0.28
VAC14-210ENST00000568548 XKR7Q5GH72 579 aa16.83■□□□□ 0.28
VAC14-210ENST00000568548 USP51Q70EK9 711 aa16.83■□□□□ 0.28
VAC14-210ENST00000568548 GOLGA7Q7Z5G4 137 aa16.83■□□□□ 0.28
VAC14-210ENST00000568548 SPATA19Q7Z5L4 167 aa16.83■□□□□ 0.28
VAC14-210ENST00000568548 RIMKLAQ8IXN7 391 aa16.83■□□□□ 0.28
VAC14-210ENST00000568548 ABHD11Q8NFV4 315 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms