RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 CFAP36Q96G28 342 aa12.7□□□□□ -0.38
CNOT1-213ENST00000568158 PRR11Q96HE9 360 aaPredicted RBP12.7□□□□□ -0.38
CNOT1-213ENST00000568158 BIRC8Q96P09 236 aa12.7□□□□□ -0.38
CNOT1-213ENST00000568158 WDR83Q9BRX9 315 aaKnown RBP12.7□□□□□ -0.38
CNOT1-213ENST00000568158 CCDC86Q9H6F5 360 aaKnown RBP12.7□□□□□ -0.38
CNOT1-213ENST00000568158 PLAC1Q9HBJ0 212 aa12.7□□□□□ -0.38
CNOT1-213ENST00000568158 FBXO6Q9NRD1 293 aaPredicted RBP12.7□□□□□ -0.38
CNOT1-213ENST00000568158 GRHL1Q9NZI5 618 aa12.7□□□□□ -0.38
CNOT1-213ENST00000568158 WHRNQ9P202 907 aa12.7□□□□□ -0.38
CNOT1-213ENST00000568158 GALPQ9UBC7 116 aa12.7□□□□□ -0.38
CNOT1-213ENST00000568158 CHMP2BQ9UQN3 213 aa12.7□□□□□ -0.38
CNOT1-213ENST00000568158 TEX264Q9Y6I9 313 aa12.7□□□□□ -0.38
CNOT1-213ENST00000568158 CCDC187A0A096LP49 1063 aa12.69□□□□□ -0.38
CNOT1-213ENST00000568158 TMX2-CTNND1H3BSU7 103 aa12.69□□□□□ -0.38
CNOT1-213ENST00000568158 KIF2AO00139 706 aaPredicted RBP12.69□□□□□ -0.38
CNOT1-213ENST00000568158 LIN7AO14910 233 aaPredicted RBP12.69□□□□□ -0.38
CNOT1-213ENST00000568158 DUX1O43812 170 aa12.69□□□□□ -0.38
CNOT1-213ENST00000568158 HAUS5O94927 633 aa12.69□□□□□ -0.38
CNOT1-213ENST00000568158 GSTM1P09488 218 aa12.69□□□□□ -0.38
CNOT1-213ENST00000568158 HGFP14210 728 aa12.69□□□□□ -0.38
CNOT1-213ENST00000568158 OGNP20774 298 aaKnown RBP12.69□□□□□ -0.38
CNOT1-213ENST00000568158 RPS3P23396 243 aaKnown RBP eCLIP12.69□□□□□ -0.383e-8■□□□□ 9.6
CNOT1-213ENST00000568158 AOAHP28039 575 aa12.69□□□□□ -0.38
CNOT1-213ENST00000568158 CCKBRP32239 447 aa12.69□□□□□ -0.38
CNOT1-213ENST00000568158 CD151P48509 253 aa12.69□□□□□ -0.38
CNOT1-213ENST00000568158 GABREP78334 506 aa12.69□□□□□ -0.38
CNOT1-213ENST00000568158 GSTM4Q03013 218 aa12.69□□□□□ -0.38
CNOT1-213ENST00000568158 HSPA14Q0VDF9 509 aa12.69□□□□□ -0.38
CNOT1-213ENST00000568158 ABRQ12979 859 aa12.69□□□□□ -0.38
CNOT1-213ENST00000568158 RPA4Q13156 261 aa12.69□□□□□ -0.38
CNOT1-213ENST00000568158 PRKG2Q13237 762 aa12.69□□□□□ -0.38
CNOT1-213ENST00000568158 CRYMQ14894 314 aa12.69□□□□□ -0.38
CNOT1-213ENST00000568158 C16orf72Q14CZ0 275 aa12.69□□□□□ -0.38
CNOT1-213ENST00000568158 HIF1AQ16665 826 aa12.69□□□□□ -0.38
CNOT1-213ENST00000568158 SPANXN3Q5MJ09 141 aa12.69□□□□□ -0.38
CNOT1-213ENST00000568158 ZNF470Q6ECI4 717 aa12.69□□□□□ -0.38
CNOT1-213ENST00000568158 UNC5AQ6ZN44 842 aa12.69□□□□□ -0.38
CNOT1-213ENST00000568158 RAB11FIP2Q7L804 512 aa12.69□□□□□ -0.38
CNOT1-213ENST00000568158 KCNMB4Q86W47 210 aa12.69□□□□□ -0.38
CNOT1-213ENST00000568158 RBM12BQ8IXT5 1001 aaKnown RBP12.69□□□□□ -0.38
CNOT1-213ENST00000568158 FBXO39Q8N4B4 442 aa12.69□□□□□ -0.38
CNOT1-213ENST00000568158 BBOF1Q8ND07 529 aa12.69□□□□□ -0.38
CNOT1-213ENST00000568158 OR4D9Q8NGE8 314 aa12.69□□□□□ -0.38
CNOT1-213ENST00000568158 WDR36Q8NI36 951 aaKnown RBP12.69□□□□□ -0.38
CNOT1-213ENST00000568158 KIF18AQ8NI77 898 aa12.69□□□□□ -0.38
CNOT1-213ENST00000568158 TFGQ92734 400 aaPredicted RBP12.69□□□□□ -0.38
CNOT1-213ENST00000568158 GRAMD1AQ96CP6 724 aa12.69□□□□□ -0.38
CNOT1-213ENST00000568158 CCDC74BQ96LY2 380 aa12.69□□□□□ -0.38
CNOT1-213ENST00000568158 STRADBQ9C0K7 418 aa12.69□□□□□ -0.38
CNOT1-213ENST00000568158 POLR1BQ9H9Y6 1135 aa12.69□□□□□ -0.38
CNOT1-213ENST00000568158 ZC3H7BQ9UGR2 993 aaKnown RBP12.69□□□□□ -0.38
CNOT1-213ENST00000568158 KLHL3Q9UH77 587 aa12.69□□□□□ -0.38
CNOT1-213ENST00000568158 GNPTGQ9UJJ9 305 aa12.69□□□□□ -0.38
CNOT1-213ENST00000568158 FBXO5Q9UKT4 447 aa12.69□□□□□ -0.38
CNOT1-213ENST00000568158 CDYLQ9Y232 598 aa12.69□□□□□ -0.38
CNOT1-213ENST00000568158 UTP11Q9Y3A2 253 aaKnown RBP12.69□□□□□ -0.38
CNOT1-213ENST00000568158 MRFAP1Q9Y605 127 aa12.69□□□□□ -0.38
CNOT1-213ENST00000568158 COLEC10Q9Y6Z7 277 aa12.69□□□□□ -0.38
CNOT1-213ENST00000568158 F8W8V4 182 aa12.68□□□□□ -0.38
CNOT1-213ENST00000568158 IFRD1O00458 451 aaPredicted RBP12.68□□□□□ -0.38
CNOT1-213ENST00000568158 BRINP1O60477 761 aa12.68□□□□□ -0.38
CNOT1-213ENST00000568158 NIPSNAP2O75323 286 aa12.68□□□□□ -0.38
CNOT1-213ENST00000568158 GPC4O75487 556 aa12.68□□□□□ -0.38
CNOT1-213ENST00000568158 TTC4O95801 387 aa12.68□□□□□ -0.38
CNOT1-213ENST00000568158 PKMP14618 531 aaKnown RBP12.68□□□□□ -0.38
CNOT1-213ENST00000568158 ACADLP28330 430 aa12.68□□□□□ -0.38
CNOT1-213ENST00000568158 SLC1A2P43004 574 aa12.68□□□□□ -0.38
CNOT1-213ENST00000568158 LSSP48449 732 aa12.68□□□□□ -0.38
CNOT1-213ENST00000568158 CARSP49589 748 aaKnown RBP12.68□□□□□ -0.38
CNOT1-213ENST00000568158 PLTPP55058 493 aa12.68□□□□□ -0.38
CNOT1-213ENST00000568158 GFERP55789 205 aa12.68□□□□□ -0.38
CNOT1-213ENST00000568158 MPP1Q00013 466 aa12.68□□□□□ -0.38
CNOT1-213ENST00000568158 CALCOCO2Q13137 446 aa12.68□□□□□ -0.38
CNOT1-213ENST00000568158 FASTKD3Q14CZ7 662 aaKnown RBP12.68□□□□□ -0.38
CNOT1-213ENST00000568158 CLPPQ16740 277 aaPredicted RBP12.68□□□□□ -0.38
CNOT1-213ENST00000568158 ZNF549Q6P9A3 640 aa12.68□□□□□ -0.38
CNOT1-213ENST00000568158 CNSTQ6PJW8 725 aa12.68□□□□□ -0.38
CNOT1-213ENST00000568158 WDR74Q6RFH5 385 aaPredicted RBP12.68□□□□□ -0.38
CNOT1-213ENST00000568158 LRRC6Q86X45 466 aa12.68□□□□□ -0.38
CNOT1-213ENST00000568158 MMGT1Q8N4V1 131 aa12.68□□□□□ -0.38
CNOT1-213ENST00000568158 KDF1Q8NAX2 398 aaPredicted RBP12.68□□□□□ -0.38
CNOT1-213ENST00000568158 FBXO36Q8NEA4 188 aa12.68□□□□□ -0.38
CNOT1-213ENST00000568158 OR4E2Q8NGC2 313 aa12.68□□□□□ -0.38
CNOT1-213ENST00000568158 RSC1A1Q92681 617 aa12.68□□□□□ -0.38
CNOT1-213ENST00000568158 ART4Q93070 314 aa12.68□□□□□ -0.38
CNOT1-213ENST00000568158 TMEM159Q96B96 161 aa12.68□□□□□ -0.38
CNOT1-213ENST00000568158 FAM136AQ96C01 138 aa12.68□□□□□ -0.38
CNOT1-213ENST00000568158 LIN37Q96GY3 246 aaPredicted RBP12.68□□□□□ -0.38
CNOT1-213ENST00000568158 DPYSL5Q9BPU6 564 aa12.68□□□□□ -0.38
CNOT1-213ENST00000568158 NAT9Q9BTE0 207 aa12.68□□□□□ -0.38
CNOT1-213ENST00000568158 TSSK1BQ9BXA7 367 aa12.68□□□□□ -0.38
CNOT1-213ENST00000568158 ZMYND15Q9H091 742 aa12.68□□□□□ -0.38
CNOT1-213ENST00000568158 PDP2Q9P2J9 529 aa12.68□□□□□ -0.38
CNOT1-213ENST00000568158 SLC24A2Q9UI40 661 aa12.68□□□□□ -0.38
CNOT1-213ENST00000568158 E7ESA3 106 aa12.67□□□□□ -0.38
CNOT1-213ENST00000568158 PFDN6O15212 129 aa12.67□□□□□ -0.38
CNOT1-213ENST00000568158 CAPN5O15484 640 aaPredicted RBP12.67□□□□□ -0.38
CNOT1-213ENST00000568158 KIF1CO43896 1103 aaKnown RBP12.67□□□□□ -0.38
CNOT1-213ENST00000568158 TNFSF15O95150 251 aa12.67□□□□□ -0.38
CNOT1-213ENST00000568158 APOA4P06727 396 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms