RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 KLHL42Q9P2K6 505 aa17.6■□□□□ 0.41
COMMD4-222ENST00000568034 MTO1Q9Y2Z2 717 aaKnown RBP17.6■□□□□ 0.41
COMMD4-222ENST00000568034 ASXL3Q9C0F0 2248 aa17.6■□□□□ 0.41
COMMD4-222ENST00000568034 PRAMEF33A0A0G2JMD5 474 aa17.59■□□□□ 0.41
COMMD4-222ENST00000568034 FAM95CA0A1B0GW59 222 aa17.59■□□□□ 0.41
COMMD4-222ENST00000568034 HMX2A2RU54 273 aa17.59■□□□□ 0.41
COMMD4-222ENST00000568034 EME2A4GXA9 379 aaPredicted RBP17.59■□□□□ 0.41
COMMD4-222ENST00000568034 OR5K4A6NMS3 321 aa17.59■□□□□ 0.41
COMMD4-222ENST00000568034 E5RI56 91 aa17.59■□□□□ 0.41
COMMD4-222ENST00000568034 TUBBP07437 444 aa17.59■□□□□ 0.41
COMMD4-222ENST00000568034 SLC35G4P0C7Q5 338 aa17.59■□□□□ 0.41
COMMD4-222ENST00000568034 CKMT2P17540 419 aa17.59■□□□□ 0.41
COMMD4-222ENST00000568034 GCAP28676 217 aa17.59■□□□□ 0.41
COMMD4-222ENST00000568034 FASLGP48023 281 aa17.59■□□□□ 0.41
COMMD4-222ENST00000568034 ACADVLP49748 655 aa17.59■□□□□ 0.41
COMMD4-222ENST00000568034 PLOD1Q02809 727 aaPredicted RBP17.59■□□□□ 0.41
COMMD4-222ENST00000568034 ACSBG2Q5FVE4 666 aa17.59■□□□□ 0.41
COMMD4-222ENST00000568034 GRTP1Q5TC63 336 aa17.59■□□□□ 0.41
COMMD4-222ENST00000568034 FAM45BPQ6NSW5 357 aa17.59■□□□□ 0.41
COMMD4-222ENST00000568034 DUS1LQ6P1R4 473 aaKnown RBP17.59■□□□□ 0.41
COMMD4-222ENST00000568034 ZNF438Q7Z4V0 828 aa17.59■□□□□ 0.41
COMMD4-222ENST00000568034 PDZD3Q86UT5 571 aa17.59■□□□□ 0.41
COMMD4-222ENST00000568034 ZBTB2Q8N680 514 aa17.59■□□□□ 0.41
COMMD4-222ENST00000568034 FAM45AQ8TCE6 357 aa17.59■□□□□ 0.41
COMMD4-222ENST00000568034 MAPK15Q8TD08 544 aa17.59■□□□□ 0.41
COMMD4-222ENST00000568034 ASZ1Q8WWH4 475 aa17.59■□□□□ 0.41
COMMD4-222ENST00000568034 TMEM159Q96B96 161 aa17.59■□□□□ 0.41
COMMD4-222ENST00000568034 GPR22Q99680 433 aa17.59■□□□□ 0.41
COMMD4-222ENST00000568034 CDC6Q99741 560 aa17.59■□□□□ 0.41
COMMD4-222ENST00000568034 RTKNQ9BST9 563 aa17.59■□□□□ 0.41
COMMD4-222ENST00000568034 DHRS4Q9BTZ2 278 aa17.59■□□□□ 0.41
COMMD4-222ENST00000568034 SARS2Q9NP81 518 aaKnown RBP17.59■□□□□ 0.41
COMMD4-222ENST00000568034 PADI4Q9UM07 663 aa17.59■□□□□ 0.41
COMMD4-222ENST00000568034 VWA7Q9Y334 891 aa17.59■□□□□ 0.41
COMMD4-222ENST00000568034 DHRS7Q9Y394 339 aa17.59■□□□□ 0.41
COMMD4-222ENST00000568034 CFAP20Q9Y6A4 193 aaKnown RBP17.59■□□□□ 0.41
COMMD4-222ENST00000568034 RNF215Q9Y6U7 377 aa17.59■□□□□ 0.41
COMMD4-222ENST00000568034 RP1P56715 2156 aa17.58■□□□□ 0.4
COMMD4-222ENST00000568034 GIPC1O14908 333 aa17.58■□□□□ 0.4
COMMD4-222ENST00000568034 PPM1DO15297 605 aa17.58■□□□□ 0.4
COMMD4-222ENST00000568034 CTIFO43310 598 aaKnown RBP17.58■□□□□ 0.4
COMMD4-222ENST00000568034 TNFSF14O43557 240 aa17.58■□□□□ 0.4
COMMD4-222ENST00000568034 VPS26AO75436 327 aa17.58■□□□□ 0.4
COMMD4-222ENST00000568034 WISP3O95389 354 aaPredicted RBP17.58■□□□□ 0.4
COMMD4-222ENST00000568034 APOA4P06727 396 aa17.58■□□□□ 0.4
COMMD4-222ENST00000568034 MTHFD1P11586 935 aaKnown RBP17.58■□□□□ 0.4
COMMD4-222ENST00000568034 SLC2A4P14672 509 aa17.58■□□□□ 0.4
COMMD4-222ENST00000568034 XRCC1P18887 633 aaPredicted RBP17.58■□□□□ 0.4
COMMD4-222ENST00000568034 ACP1P24666 158 aa17.58■□□□□ 0.4
COMMD4-222ENST00000568034 TAS2R39P59534 338 aa17.58■□□□□ 0.4
COMMD4-222ENST00000568034 TMED2Q15363 201 aa17.58■□□□□ 0.4
COMMD4-222ENST00000568034 KLHL38Q2WGJ6 581 aa17.58■□□□□ 0.4
COMMD4-222ENST00000568034 PERM1Q5SV97 790 aa17.58■□□□□ 0.4
COMMD4-222ENST00000568034 MRRFQ96E11 262 aaKnown RBP17.58■□□□□ 0.4
COMMD4-222ENST00000568034 ELMO2Q96JJ3 720 aa17.58■□□□□ 0.4
COMMD4-222ENST00000568034 C12orf66Q96MD2 445 aa17.58■□□□□ 0.4
COMMD4-222ENST00000568034 PAFAH2Q99487 392 aa17.58■□□□□ 0.4
COMMD4-222ENST00000568034 POT1Q9NUX5 634 aa17.58■□□□□ 0.4
COMMD4-222ENST00000568034 TAS2R13Q9NYV9 303 aa17.58■□□□□ 0.4
COMMD4-222ENST00000568034 NCKIPSDQ9NZQ3 722 aa17.58■□□□□ 0.4
COMMD4-222ENST00000568034 TXNDC16Q9P2K2 825 aa17.58■□□□□ 0.4
COMMD4-222ENST00000568034 CPNE7Q9UBL6 633 aa17.58■□□□□ 0.4
COMMD4-222ENST00000568034 KPNA5O15131 536 aa17.57■□□□□ 0.4
COMMD4-222ENST00000568034 SHBGP04278 402 aa17.57■□□□□ 0.4
COMMD4-222ENST00000568034 ITGA2BP08514 1039 aa17.57■□□□□ 0.4
COMMD4-222ENST00000568034 GLB1P16278 677 aa17.57■□□□□ 0.4
COMMD4-222ENST00000568034 ATP5DP30049 168 aa17.57■□□□□ 0.4
COMMD4-222ENST00000568034 SPRP35270 261 aaPredicted RBP17.57■□□□□ 0.4
COMMD4-222ENST00000568034 HSD17B3P37058 310 aa17.57■□□□□ 0.4
COMMD4-222ENST00000568034 HALP42357 657 aa17.57■□□□□ 0.4
COMMD4-222ENST00000568034 RPIAP49247 311 aa17.57■□□□□ 0.4
COMMD4-222ENST00000568034 DAB2P98082 770 aa17.57■□□□□ 0.4
COMMD4-222ENST00000568034 NR1D2Q14995 579 aa17.57■□□□□ 0.4
COMMD4-222ENST00000568034 TRIP6Q15654 476 aaKnown RBP17.57■□□□□ 0.4
COMMD4-222ENST00000568034 TMEM207Q6UWW9 146 aa17.57■□□□□ 0.4
COMMD4-222ENST00000568034 SLC9B2Q86UD5 537 aa17.57■□□□□ 0.4
COMMD4-222ENST00000568034 CEP97Q8IW35 865 aa17.57■□□□□ 0.4
COMMD4-222ENST00000568034 CPNE9Q8IYJ1 553 aa17.57■□□□□ 0.4
COMMD4-222ENST00000568034 DCAKDQ8WVC6 231 aa17.57■□□□□ 0.4
COMMD4-222ENST00000568034 UBLCP1Q8WVY7 318 aaPredicted RBP17.57■□□□□ 0.4
COMMD4-222ENST00000568034 INPP5DQ92835 1189 aa17.57■□□□□ 0.4
COMMD4-222ENST00000568034 SLC32A1Q9H598 525 aa17.57■□□□□ 0.4
COMMD4-222ENST00000568034 IMP3Q9NV31 184 aaKnown RBP17.57■□□□□ 0.4
COMMD4-222ENST00000568034 TRMT6Q9UJA5 497 aaKnown RBP17.57■□□□□ 0.4
COMMD4-222ENST00000568034 SPAARA0A1B0GVQ0 90 aa17.56■□□□□ 0.4
COMMD4-222ENST00000568034 CASC3O15234 703 aaKnown RBP17.56■□□□□ 0.4
COMMD4-222ENST00000568034 NUDT21O43809 227 aaKnown RBP17.56■□□□□ 0.4
COMMD4-222ENST00000568034 DKK1O94907 266 aa17.56■□□□□ 0.4
COMMD4-222ENST00000568034 TSPAN12O95859 305 aa17.56■□□□□ 0.4
COMMD4-222ENST00000568034 CEACAM1P13688 526 aa17.56■□□□□ 0.4
COMMD4-222ENST00000568034 SDHBP21912 280 aa17.56■□□□□ 0.4
COMMD4-222ENST00000568034 HHEXQ03014 270 aa17.56■□□□□ 0.4
COMMD4-222ENST00000568034 ILF2Q12905 390 aaKnown RBP17.56■□□□□ 0.4
COMMD4-222ENST00000568034 BMPR2Q13873 1038 aa17.56■□□□□ 0.4
COMMD4-222ENST00000568034 ZNF460Q14592 562 aa17.56■□□□□ 0.4
COMMD4-222ENST00000568034 ZKSCAN8Q15776 578 aaPredicted RBP17.56■□□□□ 0.4
COMMD4-222ENST00000568034 TTLL9Q3SXZ7 439 aa17.56■□□□□ 0.4
COMMD4-222ENST00000568034 PAQR3Q6TCH7 311 aa17.56■□□□□ 0.4
COMMD4-222ENST00000568034 EFL1Q7Z2Z2 1120 aaKnown RBP17.56■□□□□ 0.4
COMMD4-222ENST00000568034 ZNF761Q86XN6 746 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms