RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 SNX1Q13596 522 aa11.91□□□□□ -0.5
GTF3C1-208ENST00000567843 IL11RAQ14626 422 aa11.91□□□□□ -0.5
GTF3C1-208ENST00000567843 SKIDA1Q1XH10 827 aa11.91□□□□□ -0.5
GTF3C1-208ENST00000567843 PRAMEF17Q5VTA0 474 aa11.91□□□□□ -0.5
GTF3C1-208ENST00000567843 CAPRIN2Q6IMN6 1127 aaKnown RBP11.91□□□□□ -0.5
GTF3C1-208ENST00000567843 OOSP2Q86WS3 158 aa11.91□□□□□ -0.5
GTF3C1-208ENST00000567843 HM13Q8TCT9 377 aa11.91□□□□□ -0.5
GTF3C1-208ENST00000567843 C1orf54Q8WWF1 131 aa11.91□□□□□ -0.5
GTF3C1-208ENST00000567843 UBXN4Q92575 508 aa11.91□□□□□ -0.5
GTF3C1-208ENST00000567843 LRRC45Q96CN5 670 aa11.91□□□□□ -0.5
GTF3C1-208ENST00000567843 CDKN2AIPNLQ96HQ2 116 aa11.91□□□□□ -0.5
GTF3C1-208ENST00000567843 HES6Q96HZ4 224 aa11.91□□□□□ -0.5
GTF3C1-208ENST00000567843 SLC41A2Q96JW4 573 aa11.91□□□□□ -0.5
GTF3C1-208ENST00000567843 LINC00615Q96LM1 132 aaPredicted RBP11.91□□□□□ -0.5
GTF3C1-208ENST00000567843 EFHD1Q9BUP0 239 aa11.91□□□□□ -0.5
GTF3C1-208ENST00000567843 RAB33BQ9H082 229 aa11.91□□□□□ -0.5
GTF3C1-208ENST00000567843 XKR8Q9H6D3 395 aa11.91□□□□□ -0.5
GTF3C1-208ENST00000567843 KIR3DX1Q9H7L2 352 aa11.91□□□□□ -0.5
GTF3C1-208ENST00000567843 COG4Q9H9E3 785 aa11.91□□□□□ -0.5
GTF3C1-208ENST00000567843 PDE7BQ9NP56 450 aa11.91□□□□□ -0.5
GTF3C1-208ENST00000567843 FGF21Q9NSA1 209 aa11.91□□□□□ -0.5
GTF3C1-208ENST00000567843 NLE1Q9NVX2 485 aaPredicted RBP11.91□□□□□ -0.5
GTF3C1-208ENST00000567843 SOHLH2Q9NX45 425 aa11.91□□□□□ -0.5
GTF3C1-208ENST00000567843 SMARCAL1Q9NZC9 954 aa11.91□□□□□ -0.5
GTF3C1-208ENST00000567843 PRSS21Q9Y6M0 314 aa11.91□□□□□ -0.5
GTF3C1-208ENST00000567843 SPTBP11277 2137 aa11.9□□□□□ -0.5
GTF3C1-208ENST00000567843 GSAPA4D1B5 854 aa11.9□□□□□ -0.5
GTF3C1-208ENST00000567843 TLCD2A6NGC4 264 aa11.9□□□□□ -0.5
GTF3C1-208ENST00000567843 SLC9B1P1A6NJY1 282 aa11.9□□□□□ -0.5
GTF3C1-208ENST00000567843 AP2A1O95782 977 aa11.9□□□□□ -0.5
GTF3C1-208ENST00000567843 CCNYL3P0C7X3 344 aa11.9□□□□□ -0.5
GTF3C1-208ENST00000567843 SFTPCP11686 197 aa11.9□□□□□ -0.5
GTF3C1-208ENST00000567843 RPS18P62269 152 aaKnown RBP11.9□□□□□ -0.5
GTF3C1-208ENST00000567843 DBN1Q16643 649 aa11.9□□□□□ -0.5
GTF3C1-208ENST00000567843 GPR33Q49SQ1 333 aa11.9□□□□□ -0.5
GTF3C1-208ENST00000567843 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.9□□□□□ -0.5
GTF3C1-208ENST00000567843 KLHDC8BQ8IXV7 354 aa11.9□□□□□ -0.5
GTF3C1-208ENST00000567843 DNAAF3Q8N9W5 541 aa11.9□□□□□ -0.5
GTF3C1-208ENST00000567843 CT55Q8WUE5 264 aa11.9□□□□□ -0.5
GTF3C1-208ENST00000567843 LCN9Q8WX39 176 aa11.9□□□□□ -0.5
GTF3C1-208ENST00000567843 CATSPER2Q96P56 530 aa11.9□□□□□ -0.5
GTF3C1-208ENST00000567843 PPP1R2P1Q96PQ5 205 aa11.9□□□□□ -0.5
GTF3C1-208ENST00000567843 ALS2CR12Q96Q35 445 aa11.9□□□□□ -0.5
GTF3C1-208ENST00000567843 CCM2Q9BSQ5 444 aa11.9□□□□□ -0.5
GTF3C1-208ENST00000567843 HGH1Q9BTY7 390 aa11.9□□□□□ -0.5
GTF3C1-208ENST00000567843 TLR10Q9BXR5 811 aa11.9□□□□□ -0.5
GTF3C1-208ENST00000567843 ETNK1Q9HBU6 452 aa11.9□□□□□ -0.5
GTF3C1-208ENST00000567843 LHX9Q9NQ69 397 aa11.9□□□□□ -0.5
GTF3C1-208ENST00000567843 SLC2A6Q9UGQ3 507 aa11.9□□□□□ -0.5
GTF3C1-208ENST00000567843 FEZ2Q9UHY8 353 aaPredicted RBP11.9□□□□□ -0.5
GTF3C1-208ENST00000567843 PADI1Q9ULC6 663 aa11.9□□□□□ -0.5
GTF3C1-208ENST00000567843 HECTD1Q9ULT8 2610 aa11.9□□□□□ -0.5
GTF3C1-208ENST00000567843 COLEC10Q9Y6Z7 277 aa11.9□□□□□ -0.5
GTF3C1-208ENST00000567843 TRBV5-4A0A0C4DH59 114 aa11.89□□□□□ -0.51
GTF3C1-208ENST00000567843 PIPSLA2A3N6 862 aa11.89□□□□□ -0.51
GTF3C1-208ENST00000567843 CCDC162PA2VCL2 907 aa11.89□□□□□ -0.51
GTF3C1-208ENST00000567843 BTN3A3O00478 584 aa11.89□□□□□ -0.51
GTF3C1-208ENST00000567843 SUV39H1O43463 412 aa11.89□□□□□ -0.51
GTF3C1-208ENST00000567843 WISP1O95388 367 aa11.89□□□□□ -0.51
GTF3C1-208ENST00000567843 PVRP15151 417 aa11.89□□□□□ -0.51
GTF3C1-208ENST00000567843 NR1D1P20393 614 aa11.89□□□□□ -0.51
GTF3C1-208ENST00000567843 CDH3P22223 829 aa11.89□□□□□ -0.51
GTF3C1-208ENST00000567843 MSNP26038 577 aaKnown RBP11.89□□□□□ -0.51
GTF3C1-208ENST00000567843 ACRV1P26436 265 aa11.89□□□□□ -0.51
GTF3C1-208ENST00000567843 LMAN1P49257 510 aa11.89□□□□□ -0.51
GTF3C1-208ENST00000567843 CSE1LP55060 971 aaKnown RBP11.89□□□□□ -0.51
GTF3C1-208ENST00000567843 HSD11B2P80365 405 aa11.89□□□□□ -0.51
GTF3C1-208ENST00000567843 MC1RQ01726 317 aa11.89□□□□□ -0.51
GTF3C1-208ENST00000567843 ACY1Q03154 408 aa11.89□□□□□ -0.51
GTF3C1-208ENST00000567843 KCNC4Q03721 635 aa11.89□□□□□ -0.51
GTF3C1-208ENST00000567843 CACNG1Q06432 222 aa11.89□□□□□ -0.51
GTF3C1-208ENST00000567843 PRKAA1Q13131 559 aa11.89□□□□□ -0.51
GTF3C1-208ENST00000567843 DNASE1L3Q13609 305 aa11.89□□□□□ -0.51
GTF3C1-208ENST00000567843 MAP7Q14244 749 aa11.89□□□□□ -0.51
GTF3C1-208ENST00000567843 P3H1Q32P28 736 aa11.89□□□□□ -0.51
GTF3C1-208ENST00000567843 SEL1L2Q5TEA6 688 aa11.89□□□□□ -0.51
GTF3C1-208ENST00000567843 PPP1R21Q6ZMI0 780 aa11.89□□□□□ -0.51
GTF3C1-208ENST00000567843 ATG14Q6ZNE5 492 aa11.89□□□□□ -0.51
GTF3C1-208ENST00000567843 TXLNBQ8N3L3 684 aa11.89□□□□□ -0.51
GTF3C1-208ENST00000567843 GLIS1Q8NBF1 620 aa11.89□□□□□ -0.51
GTF3C1-208ENST00000567843 OR52E1Q8NGJ3 308 aa11.89□□□□□ -0.51
GTF3C1-208ENST00000567843 STYXQ8WUJ0 223 aa11.89□□□□□ -0.51
GTF3C1-208ENST00000567843 APOBEC4Q8WW27 367 aaKnown RBP11.89□□□□□ -0.51
GTF3C1-208ENST00000567843 TWSG1Q9GZX9 223 aa11.89□□□□□ -0.51
GTF3C1-208ENST00000567843 OR52A5Q9H2C5 316 aa11.89□□□□□ -0.51
GTF3C1-208ENST00000567843 SRMSQ9H3Y6 488 aa11.89□□□□□ -0.51
GTF3C1-208ENST00000567843 SEMA5BQ9P283 1151 aa11.89□□□□□ -0.51
GTF3C1-208ENST00000567843 IMPACTQ9P2X3 320 aa11.89□□□□□ -0.51
GTF3C1-208ENST00000567843 ZNF148Q9UQR1 794 aa11.89□□□□□ -0.51
GTF3C1-208ENST00000567843 PCDHB3Q9Y5E6 796 aa11.89□□□□□ -0.51
GTF3C1-208ENST00000567843 IGLV3-16A0A075B6K0 115 aa11.88□□□□□ -0.51
GTF3C1-208ENST00000567843 E7EVH7 732 aa11.88□□□□□ -0.51
GTF3C1-208ENST00000567843 K7EM74 188 aa11.88□□□□□ -0.51
GTF3C1-208ENST00000567843 IFRD1O00458 451 aaPredicted RBP11.88□□□□□ -0.51
GTF3C1-208ENST00000567843 BTN3A1O00481 513 aa11.88□□□□□ -0.51
GTF3C1-208ENST00000567843 TERTO14746 1132 aaKnown RBP11.88□□□□□ -0.51
GTF3C1-208ENST00000567843 PSMD3O43242 534 aa11.88□□□□□ -0.51
GTF3C1-208ENST00000567843 LIASO43766 372 aa11.88□□□□□ -0.51
GTF3C1-208ENST00000567843 OR1I1O60431 355 aa11.88□□□□□ -0.51
GTF3C1-208ENST00000567843 SCRG1O75711 98 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms