RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 CLCN7P51798 805 aa12.38□□□□□ -0.43
SF3B3-206ENST00000565990 GALNTL6Q49A17 601 aa12.38□□□□□ -0.43
SF3B3-206ENST00000565990 WLSQ5T9L3 541 aa12.38□□□□□ -0.43
SF3B3-206ENST00000565990 CRTC3Q6UUV7 619 aa12.38□□□□□ -0.43
SF3B3-206ENST00000565990 ABRAXAS1Q6UWZ7 409 aa12.38□□□□□ -0.43
SF3B3-206ENST00000565990 PPM1NQ8N819 430 aa12.38□□□□□ -0.43
SF3B3-206ENST00000565990 CCDC63Q8NA47 563 aa12.38□□□□□ -0.43
SF3B3-206ENST00000565990 OR2I1PQ8NGU4 316 aa12.38□□□□□ -0.43
SF3B3-206ENST00000565990 LMX1AQ8TE12 382 aa12.38□□□□□ -0.43
SF3B3-206ENST00000565990 SLC44A1Q8WWI5 657 aa12.38□□□□□ -0.43
SF3B3-206ENST00000565990 KCNJ9Q92806 393 aa12.38□□□□□ -0.43
SF3B3-206ENST00000565990 ALKBH8Q96BT7 664 aaKnown RBP12.38□□□□□ -0.43
SF3B3-206ENST00000565990 PANX3Q96QZ0 392 aa12.38□□□□□ -0.43
SF3B3-206ENST00000565990 AARSD1Q9BTE6 412 aaKnown RBP12.38□□□□□ -0.43
SF3B3-206ENST00000565990 RHOJQ9H4E5 214 aa12.38□□□□□ -0.43
SF3B3-206ENST00000565990 SPATS2LQ9NUQ6 558 aaKnown RBP12.38□□□□□ -0.43
SF3B3-206ENST00000565990 ACSL5Q9ULC5 683 aa12.38□□□□□ -0.43
SF3B3-206ENST00000565990 CDYLQ9Y232 598 aa12.38□□□□□ -0.43
SF3B3-206ENST00000565990 ASCC3Q8N3C0 2202 aaKnown RBP12.38□□□□□ -0.43
SF3B3-206ENST00000565990 RIF1Q5UIP0 2472 aaKnown RBP12.37□□□□□ -0.43
SF3B3-206ENST00000565990 UBA6A0AVT1 1052 aaPredicted RBP12.37□□□□□ -0.43
SF3B3-206ENST00000565990 SLC5A10A0PJK1 596 aa12.37□□□□□ -0.43
SF3B3-206ENST00000565990 HMX2A2RU54 273 aa12.37□□□□□ -0.43
SF3B3-206ENST00000565990 A6NCN8 305 aa12.37□□□□□ -0.43
SF3B3-206ENST00000565990 LIN7AO14910 233 aaPredicted RBP12.37□□□□□ -0.43
SF3B3-206ENST00000565990 HNRNPCL1O60812 293 aaKnown RBP12.37□□□□□ -0.43
SF3B3-206ENST00000565990 SLCO2B1O94956 709 aa12.37□□□□□ -0.43
SF3B3-206ENST00000565990 CELA2BP08218 269 aaPredicted RBP12.37□□□□□ -0.43
SF3B3-206ENST00000565990 F7P08709 466 aaPredicted RBP12.37□□□□□ -0.43
SF3B3-206ENST00000565990 ACP5P13686 325 aa12.37□□□□□ -0.43
SF3B3-206ENST00000565990 CD59P13987 128 aa12.37□□□□□ -0.43
SF3B3-206ENST00000565990 VCLP18206 1134 aa12.37□□□□□ -0.43
SF3B3-206ENST00000565990 AK4P27144 223 aaPredicted RBP12.37□□□□□ -0.43
SF3B3-206ENST00000565990 GCAP28676 217 aa12.37□□□□□ -0.43
SF3B3-206ENST00000565990 LIMK1P53667 647 aa12.37□□□□□ -0.43
SF3B3-206ENST00000565990 ATXN3P54252 364 aaPredicted RBP12.37□□□□□ -0.43
SF3B3-206ENST00000565990 PLOD1Q02809 727 aaPredicted RBP12.37□□□□□ -0.43
SF3B3-206ENST00000565990 ILF3Q12906 894 aaKnown RBP eCLIP12.37□□□□□ -0.43
SF3B3-206ENST00000565990 RPA4Q13156 261 aa12.37□□□□□ -0.43
SF3B3-206ENST00000565990 C1orf61Q13536 156 aa12.37□□□□□ -0.43
SF3B3-206ENST00000565990 GBX1Q14549 363 aa12.37□□□□□ -0.43
SF3B3-206ENST00000565990 SUZ12Q15022 739 aaKnown RBP12.37□□□□□ -0.43
SF3B3-206ENST00000565990 KLHL38Q2WGJ6 581 aa12.37□□□□□ -0.43
SF3B3-206ENST00000565990 AGAP9Q5VTM2 703 aa12.37□□□□□ -0.43
SF3B3-206ENST00000565990 PTRHD1Q6GMV3 140 aaKnown RBP12.37□□□□□ -0.43
SF3B3-206ENST00000565990 CAPRIN2Q6IMN6 1127 aaKnown RBP12.37□□□□□ -0.43
SF3B3-206ENST00000565990 IYDQ6PHW0 289 aa12.37□□□□□ -0.43
SF3B3-206ENST00000565990 ADGRD1Q6QNK2 874 aa12.37□□□□□ -0.43
SF3B3-206ENST00000565990 FAM83HQ6ZRV2 1179 aaPredicted RBP12.37□□□□□ -0.43
SF3B3-206ENST00000565990 SPATA21Q7Z572 469 aa12.37□□□□□ -0.43
SF3B3-206ENST00000565990 C17orf82Q86X59 251 aaPredicted RBP12.37□□□□□ -0.43
SF3B3-206ENST00000565990 GKN2Q86XP6 184 aa12.37□□□□□ -0.43
SF3B3-206ENST00000565990 CTAGE3PQ8IX95 158 aa12.37□□□□□ -0.43
SF3B3-206ENST00000565990 CFAP206Q8IYR0 622 aa12.37□□□□□ -0.43
SF3B3-206ENST00000565990 FAM181AQ8N9Y4 354 aa12.37□□□□□ -0.43
SF3B3-206ENST00000565990 ANKRD27Q96NW4 1050 aa12.37□□□□□ -0.43
SF3B3-206ENST00000565990 RBBP8Q99708 897 aa12.37□□□□□ -0.43
SF3B3-206ENST00000565990 ELAC2Q9BQ52 826 aaKnown RBP12.37□□□□□ -0.43
SF3B3-206ENST00000565990 TSSK1BQ9BXA7 367 aa12.37□□□□□ -0.43
SF3B3-206ENST00000565990 TMEM9BQ9NQ34 198 aa12.37□□□□□ -0.43
SF3B3-206ENST00000565990 KLHL14Q9P2G3 628 aa12.37□□□□□ -0.43
SF3B3-206ENST00000565990 GALPQ9UBC7 116 aa12.37□□□□□ -0.43
SF3B3-206ENST00000565990 ZNF180Q9UJW8 692 aa12.37□□□□□ -0.43
SF3B3-206ENST00000565990 DHRS7Q9Y394 339 aa12.37□□□□□ -0.43
SF3B3-206ENST00000565990 COL5A1P20908 1838 aaPredicted RBP12.37□□□□□ -0.43
SF3B3-206ENST00000565990 GDF9O60383 454 aa12.36□□□□□ -0.43
SF3B3-206ENST00000565990 SDC3O75056 442 aa12.36□□□□□ -0.43
SF3B3-206ENST00000565990 FAM155BO75949 473 aa12.36□□□□□ -0.43
SF3B3-206ENST00000565990 WFS1O76024 890 aa12.36□□□□□ -0.43
SF3B3-206ENST00000565990 TRIM16O95361 564 aa12.36□□□□□ -0.43
SF3B3-206ENST00000565990 CHRM3P20309 590 aa12.36□□□□□ -0.43
SF3B3-206ENST00000565990 IDSP22304 550 aa12.36□□□□□ -0.43
SF3B3-206ENST00000565990 FDXRP22570 491 aa12.36□□□□□ -0.43
SF3B3-206ENST00000565990 SPRP35270 261 aaPredicted RBP12.36□□□□□ -0.43
SF3B3-206ENST00000565990 CSRP3P50461 194 aa12.36□□□□□ -0.43
SF3B3-206ENST00000565990 BNIP1Q12981 228 aa12.36□□□□□ -0.43
SF3B3-206ENST00000565990 NFE2L1Q14494 772 aa12.36□□□□□ -0.43
SF3B3-206ENST00000565990 EFTUD2Q15029 972 aaKnown RBP eCLIP12.36□□□□□ -0.43
SF3B3-206ENST00000565990 INSCQ1MX18 579 aa12.36□□□□□ -0.43
SF3B3-206ENST00000565990 RBM20Q5T481 1227 aaKnown RBP12.36□□□□□ -0.43
SF3B3-206ENST00000565990 HECTD2Q5U5R9 776 aa12.36□□□□□ -0.43
SF3B3-206ENST00000565990 TAF8Q7Z7C8 310 aa12.36□□□□□ -0.43
SF3B3-206ENST00000565990 TRABD2AQ86V40 505 aa12.36□□□□□ -0.43
SF3B3-206ENST00000565990 GATAD2AQ86YP4 633 aa12.36□□□□□ -0.43
SF3B3-206ENST00000565990 ACVR1CQ8NER5 493 aa12.36□□□□□ -0.43
SF3B3-206ENST00000565990 HM13Q8TCT9 377 aa12.36□□□□□ -0.43
SF3B3-206ENST00000565990 LKAAEAR1Q8TD35 194 aa12.36□□□□□ -0.43
SF3B3-206ENST00000565990 DCAKDQ8WVC6 231 aa12.36□□□□□ -0.43
SF3B3-206ENST00000565990 ASZ1Q8WWH4 475 aa12.36□□□□□ -0.43
SF3B3-206ENST00000565990 INPP5DQ92835 1189 aa12.36□□□□□ -0.43
SF3B3-206ENST00000565990 GPR22Q99680 433 aa12.36□□□□□ -0.43
SF3B3-206ENST00000565990 EDEM2Q9BV94 578 aa12.36□□□□□ -0.43
SF3B3-206ENST00000565990 DUSP23Q9BVJ7 150 aa12.36□□□□□ -0.43
SF3B3-206ENST00000565990 CCDC68Q9H2F9 335 aa12.36□□□□□ -0.43
SF3B3-206ENST00000565990 DPEP2Q9H4A9 486 aa12.36□□□□□ -0.43
SF3B3-206ENST00000565990 COG4Q9H9E3 785 aa12.36□□□□□ -0.43
SF3B3-206ENST00000565990 NLGN3Q9NZ94 848 aa12.36□□□□□ -0.43
SF3B3-206ENST00000565990 TAAR2Q9P1P5 351 aa12.36□□□□□ -0.43
SF3B3-206ENST00000565990 TBC1D29Q9UFV1 150 aa12.36□□□□□ -0.43
SF3B3-206ENST00000565990 KCNK6Q9Y257 313 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms