RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 ITGB6P18564 788 aa13.3□□□□□ -0.28
VPS9D1-204ENST00000565023 PREPP48147 710 aa13.3□□□□□ -0.28
VPS9D1-204ENST00000565023 VPS41P49754 854 aa13.3□□□□□ -0.28
VPS9D1-204ENST00000565023 CSE1LP55060 971 aaKnown RBP13.3□□□□□ -0.28
VPS9D1-204ENST00000565023 SESN2P58004 480 aaPredicted RBP13.3□□□□□ -0.28
VPS9D1-204ENST00000565023 TRIP13Q15645 432 aaPredicted RBP13.3□□□□□ -0.28
VPS9D1-204ENST00000565023 DNTTIP2Q5QJE6 756 aaKnown RBP13.3□□□□□ -0.28
VPS9D1-204ENST00000565023 ARMC6Q6NXE6 501 aa13.3□□□□□ -0.28
VPS9D1-204ENST00000565023 FBXO38Q6PIJ6 1188 aa13.3□□□□□ -0.28
VPS9D1-204ENST00000565023 XKR5Q6UX68 686 aa13.3□□□□□ -0.28
VPS9D1-204ENST00000565023 RASGRP3Q8IV61 690 aa13.3□□□□□ -0.28
VPS9D1-204ENST00000565023 OR6P1Q8NGX9 317 aa13.3□□□□□ -0.28
VPS9D1-204ENST00000565023 EXTL1Q92935 676 aa13.3□□□□□ -0.28
VPS9D1-204ENST00000565023 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.3□□□□□ -0.28
VPS9D1-204ENST00000565023 CAPZA3Q96KX2 299 aa13.3□□□□□ -0.28
VPS9D1-204ENST00000565023 LINC00615Q96LM1 132 aaPredicted RBP13.3□□□□□ -0.28
VPS9D1-204ENST00000565023 ZNF778Q96MU6 729 aa13.3□□□□□ -0.28
VPS9D1-204ENST00000565023 TEFMQ96QE5 360 aaKnown RBP13.3□□□□□ -0.28
VPS9D1-204ENST00000565023 NRTNQ99748 197 aa13.3□□□□□ -0.28
VPS9D1-204ENST00000565023 MAP3K3Q99759 626 aa13.3□□□□□ -0.28
VPS9D1-204ENST00000565023 C19orf43Q9BQ61 176 aa13.3□□□□□ -0.28
VPS9D1-204ENST00000565023 CCM2Q9BSQ5 444 aa13.3□□□□□ -0.28
VPS9D1-204ENST00000565023 B3GNT4Q9C0J1 378 aa13.3□□□□□ -0.28
VPS9D1-204ENST00000565023 COG4Q9H9E3 785 aa13.3□□□□□ -0.28
VPS9D1-204ENST00000565023 EIF2B3Q9NR50 452 aaKnown RBP13.3□□□□□ -0.28
VPS9D1-204ENST00000565023 HRASLS2Q9NWW9 162 aa13.3□□□□□ -0.28
VPS9D1-204ENST00000565023 RNF14Q9UBS8 474 aa13.3□□□□□ -0.28
VPS9D1-204ENST00000565023 PCDHGA4Q9Y5G9 962 aa13.3□□□□□ -0.28
VPS9D1-204ENST00000565023 MYO18BQ8IUG5 2567 aa13.3□□□□□ -0.28
VPS9D1-204ENST00000565023 UBA6A0AVT1 1052 aaPredicted RBP13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 HEATR9A2RTY3 570 aa13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 MROH6A6NGR9 719 aa13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 IFRD1O00458 451 aaPredicted RBP13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 GOT2P00505 430 aaKnown RBP13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 KRT14P02533 472 aa13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 ANKRD34CP0C6C1 535 aa13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 ZNF28P17035 718 aa13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 POLR2CP19387 275 aaPredicted RBP13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 PDHA2P29803 388 aa13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 CASQ1P31415 396 aa13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 FOXN2P32314 431 aa13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 ARL4DP49703 201 aa13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 CRADDP78560 199 aa13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 KCNAB1Q14722 419 aa13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 TSTD2Q5T7W7 516 aa13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 ZNF449Q6P9G9 518 aa13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 KLHL35Q6PF15 583 aa13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 SYT10Q6XYQ8 523 aa13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 CERS6Q6ZMG9 384 aa13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 TIPARPQ7Z3E1 657 aaKnown RBP13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 LDB1Q86U70 411 aaPredicted RBP13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 OOSP2Q86WS3 158 aa13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 NLGN4XQ8N0W4 816 aa13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 PHC3Q8NDX5 983 aa13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 PPHLN1Q8NEY8 458 aaKnown RBP13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 NLGN4YQ8NFZ3 816 aaPredicted RBP13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 OR4E2Q8NGC2 313 aa13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 ELMO1Q92556 727 aa13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 TTC9Q92623 222 aa13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 ARHGAP9Q9BRR9 750 aa13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 ZNF768Q9H5H4 540 aaKnown RBP13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 VPS37BQ9H9H4 285 aa13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 CASS4Q9NQ75 786 aa13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 FBXO8Q9NRD0 319 aa13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 SIDT1Q9NXL6 827 aaKnown RBP13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 SLC24A2Q9UI40 661 aa13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 COLEC10Q9Y6Z7 277 aa13.29□□□□□ -0.28
VPS9D1-204ENST00000565023 ZNF462Q96JM2 2506 aa13.28□□□□□ -0.28
VPS9D1-204ENST00000565023 IGLV3-16A0A075B6K0 115 aa13.28□□□□□ -0.28
VPS9D1-204ENST00000565023 IGHV5-51A0A0C4DH38 117 aa13.28□□□□□ -0.28
VPS9D1-204ENST00000565023 LOC101059948A0A1B0GTJ6 334 aa13.28□□□□□ -0.28
VPS9D1-204ENST00000565023 OR5K3A6NET4 321 aa13.28□□□□□ -0.28
VPS9D1-204ENST00000565023 C1QL1O75973 258 aa13.28□□□□□ -0.28
VPS9D1-204ENST00000565023 KIAA0754O94854 1291 aa13.28□□□□□ -0.28
VPS9D1-204ENST00000565023 ADRA1DP25100 572 aa13.28□□□□□ -0.28
VPS9D1-204ENST00000565023 PAFAH1B1P43034 410 aa13.28□□□□□ -0.28
VPS9D1-204ENST00000565023 MAGEA6P43360 314 aa13.28□□□□□ -0.28
VPS9D1-204ENST00000565023 PRAMEP78395 509 aa13.28□□□□□ -0.28
VPS9D1-204ENST00000565023 CDK16Q00536 496 aa13.28□□□□□ -0.28
VPS9D1-204ENST00000565023 GPS1Q13098 491 aa13.28□□□□□ -0.28
VPS9D1-204ENST00000565023 PRKG2Q13237 762 aa13.28□□□□□ -0.28
VPS9D1-204ENST00000565023 BOP1Q14137 746 aaKnown RBP13.28□□□□□ -0.28
VPS9D1-204ENST00000565023 CAPRIN2Q6IMN6 1127 aaKnown RBP13.28□□□□□ -0.28
VPS9D1-204ENST00000565023 AFTPHQ6ULP2 937 aa13.28□□□□□ -0.28
VPS9D1-204ENST00000565023 PRSS42Q7Z5A4 293 aa13.28□□□□□ -0.28
VPS9D1-204ENST00000565023 SIDT2Q8NBJ9 832 aaKnown RBP13.28□□□□□ -0.28
VPS9D1-204ENST00000565023 OR13J1Q8NGT2 312 aa13.28□□□□□ -0.28
VPS9D1-204ENST00000565023 GRK7Q8WTQ7 553 aa13.28□□□□□ -0.28
VPS9D1-204ENST00000565023 SNRNP27Q8WVK2 155 aaKnown RBP13.28□□□□□ -0.28
VPS9D1-204ENST00000565023 SLCO2A1Q92959 643 aa13.28□□□□□ -0.28
VPS9D1-204ENST00000565023 PPM1MQ96MI6 270 aa13.28□□□□□ -0.28
VPS9D1-204ENST00000565023 HGH1Q9BTY7 390 aa13.28□□□□□ -0.28
VPS9D1-204ENST00000565023 ULBP3Q9BZM4 244 aa13.28□□□□□ -0.28
VPS9D1-204ENST00000565023 SEMA4CQ9C0C4 833 aa13.28□□□□□ -0.28
VPS9D1-204ENST00000565023 DDX47Q9H0S4 455 aaKnown RBP13.28□□□□□ -0.28
VPS9D1-204ENST00000565023 GPN2Q9H9Y4 310 aaPredicted RBP13.28□□□□□ -0.28
VPS9D1-204ENST00000565023 PCYOX1Q9UHG3 505 aa13.28□□□□□ -0.28
VPS9D1-204ENST00000565023 LNPEPQ9UIQ6 1025 aa13.28□□□□□ -0.28
VPS9D1-204ENST00000565023 PILRAQ9UKJ1 303 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms