RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 LSM12Q3MHD2 195 aaKnown RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 SYTL3Q4VX76 610 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 LGI2Q8N0V4 545 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 CLHC1Q8NHS4 586 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 RFT1Q96AA3 541 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 TCF12Q99081 682 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 S100A13Q99584 98 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 C17orf80Q9BSJ5 609 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 C1orf50Q9BV19 199 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 MLPHQ9BV36 600 aaPredicted RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 BOCQ9BWV1 1114 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 VN1R3Q9BXE9 311 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 HIPK3Q9H422 1215 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 TASP1Q9H6P5 420 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 SEMA3GQ9NS98 782 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 ZNF232Q9UNY5 417 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 DMTF1Q9Y222 760 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 PRR23D1E9PI22 279 aaPredicted RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 SAP18O00422 153 aaKnown RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 GLRA3O75311 464 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 EOMESO95936 686 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 PRR23D2P0DMB1 279 aaPredicted RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 PXNP49023 591 aaPredicted RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 CBX3Q13185 183 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 SULT1C3Q6IMI6 304 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 CD300LGQ6UXG3 332 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 TSPAN33Q86UF1 283 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 TREML1Q86YW5 311 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 TAGAPQ8N103 731 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 PCDH20Q8N6Y1 951 aaKnown RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 ZNF527Q8NB42 609 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 DQX1Q8TE96 717 aaKnown RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 PXYLP1Q8TE99 480 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 UTP4Q969X6 686 aaKnown RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 ISOC1Q96CN7 298 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 OR52B2Q96RD2 323 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 ZNF607Q96SK3 696 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 CPNE1Q99829 537 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 MUC3BQ9H195 1237 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 EHD1Q9H4M9 534 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 SOX17Q9H6I2 414 aaPredicted RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 SEMA4BQ9NPR2 832 aaPredicted RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 ABCC13Q9NSE7 274 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 AASSQ9UDR5 926 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 A0A1W2PRG6 482 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 FFAR3O14843 346 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 GPR42O15529 346 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 DLX3O60479 287 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 ADH1CP00326 375 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 SERPINA3P01011 423 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 AHSGP02765 367 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 MT-ND3P03897 115 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 IMPDH2P12268 514 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 COX7A2P14406 83 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 TCF3P15923 654 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 GABRB3P28472 473 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 CCR2P41597 374 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 MAP2K4P45985 399 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 PRIM2P49643 509 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 ELP6Q0PNE2 266 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 TOP3AQ13472 1001 aaPredicted RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 IQSEC1Q6DN90 963 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 GRAMD4Q6IC98 578 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 USP51Q70EK9 711 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 LIX1LQ8IVB5 337 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 ZC3H7AQ8IWR0 971 aaKnown RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 ADHFE1Q8IWW8 467 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 MREGQ8N565 214 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 OR52L1Q8NGH7 329 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 OVCA2Q8WZ82 227 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 PMM1Q92871 262 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 TMA16Q96EY4 203 aaKnown RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 MCRS1Q96EZ8 462 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 MYO19Q96H55 970 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 MAGEB18Q96M61 343 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 FRMD6Q96NE9 622 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 ZNF317Q96PQ6 595 aaPredicted RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 TEFMQ96QE5 360 aaKnown RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 TMEM120AQ9BXJ8 343 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 DUSP16Q9BY84 665 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 NOL6Q9H6R4 1146 aaKnown RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 CNTN3Q9P232 1028 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 COPZ2Q9P299 210 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 STOX2Q9P2F5 926 aaPredicted RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 MCM8Q9UJA3 840 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 STUB1Q9UNE7 303 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 EIF3LQ9Y262 564 aaKnown RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 DNAJC16Q9Y2G8 782 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 SPO11Q9Y5K1 396 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 OTOL1A6NHN0 477 aaPredicted RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 NOTOA8MTQ0 251 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 PLD2O14939 933 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 AKAP10O43572 662 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 IL6P05231 212 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 GLAP06280 429 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 CBSLP0DN79 551 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 MPSTP25325 297 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 MAPK3P27361 379 aaPredicted RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 CBSP35520 551 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms