RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 TAS2R39P59534 338 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 C14orf28Q4W4Y0 310 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 GRTP1Q5TC63 336 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 CEP97Q8IW35 865 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 SLC22A15Q8IZD6 547 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 ARL14Q8N4G2 192 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 UBLCP1Q8WVY7 318 aaPredicted RBP12.19□□□□□ -0.46
KARS-204ENST00000564578 TMEM159Q96B96 161 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 RMDN2Q96LZ7 410 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 INSM2Q96T92 566 aaPredicted RBP12.19□□□□□ -0.46
KARS-204ENST00000564578 PAFAH2Q99487 392 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 GPR22Q99680 433 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 TSSK1BQ9BXA7 367 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 TAS2R13Q9NYV9 303 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 TXNDC16Q9P2K2 825 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 KLHL42Q9P2K6 505 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 CFAP20Q9Y6A4 193 aaKnown RBP12.19□□□□□ -0.46
KARS-204ENST00000564578 COL5A1P20908 1838 aaPredicted RBP12.19□□□□□ -0.46
KARS-204ENST00000564578 KIR2DS5A0A0G2JLQ3 304 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 A0A0G2JNG1 304 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 FAM95CA0A1B0GW59 222 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 EME2A4GXA9 379 aaPredicted RBP12.19□□□□□ -0.46
KARS-204ENST00000564578 KIR2DS3K7RE56 304 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 KPNA5O15131 536 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 CASC3O15234 703 aaKnown RBP12.19□□□□□ -0.46
KARS-204ENST00000564578 PPM1DO15297 605 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 LDOC1O95751 146 aaPredicted RBP12.19□□□□□ -0.46
KARS-204ENST00000564578 APOA4P06727 396 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 ITGA2BP08514 1039 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 XRCC1P18887 633 aaPredicted RBP12.19□□□□□ -0.46
KARS-204ENST00000564578 FASLGP48023 281 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 UBE2IP63279 158 aaKnown RBP12.19□□□□□ -0.46
KARS-204ENST00000564578 PLOD1Q02809 727 aaPredicted RBP12.19□□□□□ -0.46
KARS-204ENST00000564578 DNAJC3Q13217 504 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 KIR2DS5Q14953 304 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 RPE65Q16518 533 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 RSPO4Q2I0M5 234 aaPredicted RBP12.19□□□□□ -0.46
KARS-204ENST00000564578 INAVAQ3KP66 663 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 ACSBG2Q5FVE4 666 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 PLEKHS1Q5SXH7 462 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 FAM45BPQ6NSW5 357 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 GUSBP11Q6P575 273 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 PAQR3Q6TCH7 311 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 TMEM207Q6UWW9 146 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 ZBTB2Q8N680 514 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 DEFB124Q8NES8 71 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 MYRIPQ8NFW9 859 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 FAM45AQ8TCE6 357 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 DCAKDQ8WVC6 231 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 CNDP2Q96KP4 475 aaKnown RBP12.19□□□□□ -0.46
KARS-204ENST00000564578 CAB39LQ9H9S4 337 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 TOR4AQ9NXH8 423 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 PADI4Q9UM07 663 aa12.19□□□□□ -0.46
KARS-204ENST00000564578 OR5K4A6NMS3 321 aa12.18□□□□□ -0.46
KARS-204ENST00000564578 VGLL3A8MV65 326 aa12.18□□□□□ -0.46
KARS-204ENST00000564578 POC1B-GALNT4F8VUJ3 575 aa12.18□□□□□ -0.46
KARS-204ENST00000564578 VPS26AO75436 327 aa12.18□□□□□ -0.46
KARS-204ENST00000564578 SLC35G4P0C7Q5 338 aa12.18□□□□□ -0.46
KARS-204ENST00000564578 CKMT2P17540 419 aa12.18□□□□□ -0.46
KARS-204ENST00000564578 SPRP35270 261 aaPredicted RBP12.18□□□□□ -0.46
KARS-204ENST00000564578 SKIV2L2P42285 1042 aaKnown RBP12.18□□□□□ -0.46
KARS-204ENST00000564578 ZNF460Q14592 562 aa12.18□□□□□ -0.46
KARS-204ENST00000564578 KLHL38Q2WGJ6 581 aa12.18□□□□□ -0.46
KARS-204ENST00000564578 SYTL3Q4VX76 610 aa12.18□□□□□ -0.46
KARS-204ENST00000564578 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.18□□□□□ -0.46
KARS-204ENST00000564578 PDZD3Q86UT5 571 aa12.18□□□□□ -0.46
KARS-204ENST00000564578 MREGQ8N565 214 aa12.18□□□□□ -0.46
KARS-204ENST00000564578 GLMNQ92990 594 aa12.18□□□□□ -0.46
KARS-204ENST00000564578 ELMO2Q96JJ3 720 aa12.18□□□□□ -0.46
KARS-204ENST00000564578 C12orf66Q96MD2 445 aa12.18□□□□□ -0.46
KARS-204ENST00000564578 SLC40A1Q9NP59 571 aa12.18□□□□□ -0.46
KARS-204ENST00000564578 CPNE7Q9UBL6 633 aa12.18□□□□□ -0.46
KARS-204ENST00000564578 FTSJ1Q9UET6 329 aa12.18□□□□□ -0.46
KARS-204ENST00000564578 CDV3Q9UKY7 258 aaKnown RBP12.18□□□□□ -0.46
KARS-204ENST00000564578 RUVBL2Q9Y230 463 aaKnown RBP12.18□□□□□ -0.46
KARS-204ENST00000564578 RNF215Q9Y6U7 377 aa12.18□□□□□ -0.46
KARS-204ENST00000564578 EXOC1LA0A1B0GW35 172 aa12.17□□□□□ -0.46
KARS-204ENST00000564578 NUDT21O43809 227 aaKnown RBP12.17□□□□□ -0.46
KARS-204ENST00000564578 WISP3O95389 354 aaPredicted RBP12.17□□□□□ -0.46
KARS-204ENST00000564578 TSPAN12O95859 305 aa12.17□□□□□ -0.46
KARS-204ENST00000564578 MTHFD1P11586 935 aaKnown RBP12.17□□□□□ -0.46
KARS-204ENST00000564578 GLB1P16278 677 aa12.17□□□□□ -0.46
KARS-204ENST00000564578 CSRP1P21291 193 aaKnown RBP12.17□□□□□ -0.46
KARS-204ENST00000564578 SAT1P21673 171 aa12.17□□□□□ -0.46
KARS-204ENST00000564578 HOXD11P31277 338 aaPredicted RBP12.17□□□□□ -0.46
KARS-204ENST00000564578 CSRP3P50461 194 aa12.17□□□□□ -0.46
KARS-204ENST00000564578 POU4F1Q01851 419 aa12.17□□□□□ -0.46
KARS-204ENST00000564578 HHEXQ03014 270 aa12.17□□□□□ -0.46
KARS-204ENST00000564578 BMPR2Q13873 1038 aa12.17□□□□□ -0.46
KARS-204ENST00000564578 MROH9Q5TGP6 573 aa12.17□□□□□ -0.46
KARS-204ENST00000564578 DUS1LQ6P1R4 473 aaKnown RBP12.17□□□□□ -0.46
KARS-204ENST00000564578 CYHR1Q6ZMK1 362 aa12.17□□□□□ -0.46
KARS-204ENST00000564578 GLRX5Q86SX6 157 aa12.17□□□□□ -0.46
KARS-204ENST00000564578 CPNE9Q8IYJ1 553 aa12.17□□□□□ -0.46
KARS-204ENST00000564578 PHC3Q8NDX5 983 aa12.17□□□□□ -0.46
KARS-204ENST00000564578 EEF1AKMT1Q8WVE0 214 aa12.17□□□□□ -0.46
KARS-204ENST00000564578 TFGQ92734 400 aaPredicted RBP12.17□□□□□ -0.46
KARS-204ENST00000564578 INPP5DQ92835 1189 aa12.17□□□□□ -0.46
KARS-204ENST00000564578 IMP3Q9NV31 184 aaKnown RBP12.17□□□□□ -0.46
KARS-204ENST00000564578 DLL3Q9NYJ7 618 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms