RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 TCF12Q99081 682 aa19.79■□□□□ 0.76
CMTM3-206ENST00000563672 KRT12Q99456 494 aa19.79■□□□□ 0.76
CMTM3-206ENST00000563672 TRIM51Q9BSJ1 452 aa19.79■□□□□ 0.76
CMTM3-206ENST00000563672 RAB33BQ9H082 229 aa19.79■□□□□ 0.76
CMTM3-206ENST00000563672 KIR3DX1Q9H7L2 352 aa19.79■□□□□ 0.76
CMTM3-206ENST00000563672 SLC24A2Q9UI40 661 aa19.79■□□□□ 0.76
CMTM3-206ENST00000563672 RPS6KL1Q9Y6S9 549 aa19.79■□□□□ 0.76
CMTM3-206ENST00000563672 DSPP15924 2871 aaKnown RBP19.79■□□□□ 0.76
CMTM3-206ENST00000563672 IFRD1O00458 451 aaPredicted RBP19.78■□□□□ 0.76
CMTM3-206ENST00000563672 NVLO15381 856 aaKnown RBP19.78■□□□□ 0.76
CMTM3-206ENST00000563672 NDUFS3O75489 264 aa19.78■□□□□ 0.76
CMTM3-206ENST00000563672 USP1O94782 785 aa19.78■□□□□ 0.76
CMTM3-206ENST00000563672 RPS3P23396 243 aaKnown RBP eCLIP19.78■□□□□ 0.76
CMTM3-206ENST00000563672 CCR7P32248 378 aa19.78■□□□□ 0.76
CMTM3-206ENST00000563672 CSTF2P33240 577 aaKnown RBP eCLIP19.78■□□□□ 0.76
CMTM3-206ENST00000563672 GFERP55789 205 aa19.78■□□□□ 0.76
CMTM3-206ENST00000563672 PCBP4P57723 403 aaKnown RBP19.78■□□□□ 0.76
CMTM3-206ENST00000563672 MORF4L2Q15014 288 aa19.78■□□□□ 0.76
CMTM3-206ENST00000563672 SNAP47Q5SQN1 464 aa19.78■□□□□ 0.76
CMTM3-206ENST00000563672 NEPROQ6NW34 567 aa19.78■□□□□ 0.76
CMTM3-206ENST00000563672 NAPRTQ6XQN6 538 aa19.78■□□□□ 0.76
CMTM3-206ENST00000563672 PDZD3Q86UT5 571 aa19.78■□□□□ 0.76
CMTM3-206ENST00000563672 LRRC6Q86X45 466 aa19.78■□□□□ 0.76
CMTM3-206ENST00000563672 LKAAEAR1Q8TD35 194 aa19.78■□□□□ 0.76
CMTM3-206ENST00000563672 JPH3Q8WXH2 748 aaPredicted RBP19.78■□□□□ 0.76
CMTM3-206ENST00000563672 ZNF669Q96BR6 464 aaPredicted RBP19.78■□□□□ 0.76
CMTM3-206ENST00000563672 C9orf72Q96LT7 481 aa19.78■□□□□ 0.76
CMTM3-206ENST00000563672 MAD1L1Q9Y6D9 718 aa19.78■□□□□ 0.76
CMTM3-206ENST00000563672 IQCF5A8MTL0 148 aa19.77■□□□□ 0.76
CMTM3-206ENST00000563672 A8MU76 341 aa19.77■□□□□ 0.76
CMTM3-206ENST00000563672 BHMG1C9JSJ3 638 aaPredicted RBP19.77■□□□□ 0.76
CMTM3-206ENST00000563672 SMAPO00193 183 aa19.77■□□□□ 0.76
CMTM3-206ENST00000563672 TP73O15350 636 aa19.77■□□□□ 0.76
CMTM3-206ENST00000563672 CAPN5O15484 640 aaPredicted RBP19.77■□□□□ 0.76
CMTM3-206ENST00000563672 ANKRD34CP0C6C1 535 aa19.77■□□□□ 0.76
CMTM3-206ENST00000563672 FGF3P11487 239 aaPredicted RBP19.77■□□□□ 0.76
CMTM3-206ENST00000563672 OGNP20774 298 aaKnown RBP19.77■□□□□ 0.76
CMTM3-206ENST00000563672 ACADLP28330 430 aa19.77■□□□□ 0.76
CMTM3-206ENST00000563672 LEPRP48357 1165 aaKnown RBP19.77■□□□□ 0.76
CMTM3-206ENST00000563672 BRD3Q15059 726 aa19.77■□□□□ 0.76
CMTM3-206ENST00000563672 MSS51Q4VC12 460 aa19.77■□□□□ 0.76
CMTM3-206ENST00000563672 RNF187Q5TA31 235 aaPredicted RBP19.77■□□□□ 0.76
CMTM3-206ENST00000563672 HIBCHQ6NVY1 386 aaPredicted RBP19.77■□□□□ 0.76
CMTM3-206ENST00000563672 KLHL35Q6PF15 583 aa19.77■□□□□ 0.76
CMTM3-206ENST00000563672 OTUD6BQ8N6M0 293 aa19.77■□□□□ 0.76
CMTM3-206ENST00000563672 PHC3Q8NDX5 983 aa19.77■□□□□ 0.76
CMTM3-206ENST00000563672 LPGAT1Q92604 370 aa19.77■□□□□ 0.76
CMTM3-206ENST00000563672 TFGQ92734 400 aaPredicted RBP19.77■□□□□ 0.76
CMTM3-206ENST00000563672 STAMBPL1Q96FJ0 436 aa19.77■□□□□ 0.76
CMTM3-206ENST00000563672 BIRC8Q96P09 236 aa19.77■□□□□ 0.76
CMTM3-206ENST00000563672 FERD3LQ96RJ6 166 aa19.77■□□□□ 0.76
CMTM3-206ENST00000563672 TSSK1BQ9BXA7 367 aa19.77■□□□□ 0.76
CMTM3-206ENST00000563672 B3GNT4Q9C0J1 378 aa19.77■□□□□ 0.76
CMTM3-206ENST00000563672 IL1RAPL1Q9NZN1 696 aa19.77■□□□□ 0.76
CMTM3-206ENST00000563672 KLHL3Q9UH77 587 aa19.77■□□□□ 0.76
CMTM3-206ENST00000563672 CDYLQ9Y232 598 aa19.77■□□□□ 0.76
CMTM3-206ENST00000563672 FAM169AQ9Y6X4 670 aa19.77■□□□□ 0.76
CMTM3-206ENST00000563672 PIKFYVEQ9Y2I7 2098 aa19.77■□□□□ 0.75
CMTM3-206ENST00000563672 ZFHX4Q86UP3 3567 aa19.77■□□□□ 0.75
CMTM3-206ENST00000563672 B4E171 279 aa19.76■□□□□ 0.75
CMTM3-206ENST00000563672 TOX3O15405 576 aaPredicted RBP19.76■□□□□ 0.75
CMTM3-206ENST00000563672 GPC4O75487 556 aa19.76■□□□□ 0.75
CMTM3-206ENST00000563672 SEC31AO94979 1220 aaKnown RBP19.76■□□□□ 0.75
CMTM3-206ENST00000563672 ITGB6P18564 788 aa19.76■□□□□ 0.75
CMTM3-206ENST00000563672 SLC5A2P31639 672 aa19.76■□□□□ 0.75
CMTM3-206ENST00000563672 TSPAN7P41732 249 aa19.76■□□□□ 0.75
CMTM3-206ENST00000563672 MAPK10P53779 464 aa19.76■□□□□ 0.75
CMTM3-206ENST00000563672 ADARP55265 1226 aaKnown RBP19.76■□□□□ 0.75
CMTM3-206ENST00000563672 DHX9Q08211 1270 aaKnown RBP19.76■□□□□ 0.75
CMTM3-206ENST00000563672 BOP1Q14137 746 aaKnown RBP19.76■□□□□ 0.75
CMTM3-206ENST00000563672 KRT33BQ14525 404 aa19.76■□□□□ 0.75
CMTM3-206ENST00000563672 PLCL1Q15111 1095 aa19.76■□□□□ 0.75
CMTM3-206ENST00000563672 SYTL3Q4VX76 610 aa19.76■□□□□ 0.75
CMTM3-206ENST00000563672 PTRHD1Q6GMV3 140 aaKnown RBP19.76■□□□□ 0.75
CMTM3-206ENST00000563672 CENPUQ71F23 418 aa19.76■□□□□ 0.75
CMTM3-206ENST00000563672 CILP2Q8IUL8 1156 aa19.76■□□□□ 0.75
CMTM3-206ENST00000563672 KRT222Q8N1A0 295 aa19.76■□□□□ 0.75
CMTM3-206ENST00000563672 BMPERQ8N8U9 685 aa19.76■□□□□ 0.75
CMTM3-206ENST00000563672 ZNF248Q8NDW4 579 aa19.76■□□□□ 0.75
CMTM3-206ENST00000563672 ACVR1CQ8NER5 493 aa19.76■□□□□ 0.75
CMTM3-206ENST00000563672 USP7Q93009 1102 aa19.76■□□□□ 0.75
CMTM3-206ENST00000563672 ZDHHC12Q96GR4 267 aa19.76■□□□□ 0.75
CMTM3-206ENST00000563672 TGM7Q96PF1 710 aa19.76■□□□□ 0.75
CMTM3-206ENST00000563672 MVB12BQ9H7P6 319 aa19.76■□□□□ 0.75
CMTM3-206ENST00000563672 OCIAD1Q9NX40 245 aa19.76■□□□□ 0.75
CMTM3-206ENST00000563672 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.76■□□□□ 0.75
CMTM3-206ENST00000563672 GNPTGQ9UJJ9 305 aa19.76■□□□□ 0.75
CMTM3-206ENST00000563672 ACSL6Q9UKU0 697 aa19.76■□□□□ 0.75
CMTM3-206ENST00000563672 PFDN6O15212 129 aa19.75■□□□□ 0.75
CMTM3-206ENST00000563672 RRP8O43159 456 aaKnown RBP19.75■□□□□ 0.75
CMTM3-206ENST00000563672 PGAM1P18669 254 aa19.75■□□□□ 0.75
CMTM3-206ENST00000563672 AOAHP28039 575 aa19.75■□□□□ 0.75
CMTM3-206ENST00000563672 ITGA8P53708 1063 aa19.75■□□□□ 0.75
CMTM3-206ENST00000563672 LONRF1Q17RB8 773 aa19.75■□□□□ 0.75
CMTM3-206ENST00000563672 DNAJC21Q5F1R6 531 aaKnown RBP19.75■□□□□ 0.75
CMTM3-206ENST00000563672 CTSL3PQ5NE16 218 aa19.75■□□□□ 0.75
CMTM3-206ENST00000563672 ASZ1Q8WWH4 475 aa19.75■□□□□ 0.75
CMTM3-206ENST00000563672 SNF8Q96H20 258 aa19.75■□□□□ 0.75
CMTM3-206ENST00000563672 C16orf45Q96MC5 204 aaPredicted RBP19.75■□□□□ 0.75
CMTM3-206ENST00000563672 DCBLD2Q96PD2 775 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms