RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 SLC2A14Q8TDB8 520 aa4.7□□□□□ -1.66
SMG1-207ENST00000563235 DTD1Q8TEA8 209 aa4.7□□□□□ -1.66
SMG1-207ENST00000563235 LRR1Q96L50 414 aa4.7□□□□□ -1.66
SMG1-207ENST00000563235 MRGPRX4Q96LA9 322 aa4.7□□□□□ -1.66
SMG1-207ENST00000563235 INSM2Q96T92 566 aaPredicted RBP4.7□□□□□ -1.66
SMG1-207ENST00000563235 SMOQ99835 787 aa4.7□□□□□ -1.66
SMG1-207ENST00000563235 LRRC1Q9BTT6 524 aa4.7□□□□□ -1.66
SMG1-207ENST00000563235 CUEDC2Q9H467 287 aa4.7□□□□□ -1.66
SMG1-207ENST00000563235 DPEP2Q9H4A9 486 aa4.7□□□□□ -1.66
SMG1-207ENST00000563235 SP140LQ9H930 580 aa4.7□□□□□ -1.66
SMG1-207ENST00000563235 ACTR8Q9H981 624 aa4.7□□□□□ -1.66
SMG1-207ENST00000563235 PNO1Q9NRX1 252 aaKnown RBP4.7□□□□□ -1.66
SMG1-207ENST00000563235 SMARCAL1Q9NZC9 954 aa4.7□□□□□ -1.66
SMG1-207ENST00000563235 PEF1Q9UBV8 284 aaKnown RBP4.7□□□□□ -1.66
SMG1-207ENST00000563235 SRCAPQ6ZRS2 3230 aa4.7□□□□□ -1.66
SMG1-207ENST00000563235 CDC42BPAQ5VT25 1732 aa4.7□□□□□ -1.66
SMG1-207ENST00000563235 RTL1A6NKG5 1358 aa4.7□□□□□ -1.66
SMG1-207ENST00000563235 RGPD3A6NKT7 1758 aaPredicted RBP4.7□□□□□ -1.66
SMG1-207ENST00000563235 RGPD4Q7Z3J3 1758 aa4.7□□□□□ -1.66
SMG1-207ENST00000563235 GSTTP1A0A1W2PQM5 241 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 SMCO2A6NFE2 343 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 RAB27BO00194 218 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 SEPT4O43236 478 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 SPINT1O43278 529 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 COCHO43405 550 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 IDH3BO43837 385 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 GDF9O60383 454 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 TRIM3O75382 744 aaPredicted RBP4.69□□□□□ -1.66
SMG1-207ENST00000563235 ARHGEF15O94989 841 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 APOA1P02647 267 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 HMGN1P05114 100 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 TFPTP0C1Z6 253 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 COX5BP10606 129 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 NQO2P16083 231 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 UGT1A1P22309 533 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 PRDX6P30041 224 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 OXTRP30559 389 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 HMGCLP35914 325 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 DLSTP36957 453 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 MMP13P45452 471 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 RAP1GAPP47736 663 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 CSNK1DP48730 415 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 HNRNPFP52597 415 aaKnown RBP4.69□□□□□ -1.66
SMG1-207ENST00000563235 ETF1P62495 437 aaKnown RBP4.69□□□□□ -1.66
SMG1-207ENST00000563235 LRRC63Q05C16 580 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 PDLIM3Q53GG5 364 aaPredicted RBP4.69□□□□□ -1.66
SMG1-207ENST00000563235 ZNF766Q5HY98 468 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 SPANXN2Q5MJ10 180 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 ATF7IP2Q5U623 682 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 ZDHHC24Q6UX98 284 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 ZPBP2Q6X784 338 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 FRA10AC1Q70Z53 315 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 BHLHA15Q7RTS1 189 aaPredicted RBP4.69□□□□□ -1.66
SMG1-207ENST00000563235 CATSPERDQ86XM0 798 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 COMMD1Q8N668 190 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 NATD1Q8N6N6 113 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 OR56B1Q8NGI3 324 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 OR52B4Q8NGK2 314 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 XAGE3Q8WTP9 111 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 KBTBD7Q8WVZ9 684 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 PIGKQ92643 395 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 MIB2Q96AX9 1013 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 EEF2KMTQ96G04 330 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 TCTN2Q96GX1 697 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 SSX3Q99909 188 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 MYL10Q9BUA6 226 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 MCOLN1Q9GZU1 580 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 FAM107BQ9H098 131 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 HDHD2Q9H0R4 259 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 DHX33Q9H6R0 707 aaKnown RBP4.69□□□□□ -1.66
SMG1-207ENST00000563235 NOL11Q9H8H0 719 aaKnown RBP4.69□□□□□ -1.66
SMG1-207ENST00000563235 TRIM45Q9H8W5 580 aaPredicted RBP4.69□□□□□ -1.66
SMG1-207ENST00000563235 L2HGDHQ9H9P8 463 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 PARVBQ9HBI1 364 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 MS4A12Q9NXJ0 267 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 SLCO1C1Q9NYB5 712 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 HAO2Q9NYQ3 351 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 NDUFA13Q9P0J0 144 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 GDAQ9Y2T3 454 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 INSL6Q9Y581 213 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 TRPM1Q7Z4N2 1603 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 ERVK-7P63135 1459 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 FUOMA2VDF0 154 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 A6NL46 340 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 ZNF839A8K0R7 811 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 ERVV-1B6SEH8 477 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 LINC01387J3KSC0 135 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 ZNF701M0R085 212 aaPredicted RBP4.69□□□□□ -1.66
SMG1-207ENST00000563235 PLRG1O43660 514 aaKnown RBP4.69□□□□□ -1.66
SMG1-207ENST00000563235 BUD23O43709 281 aaKnown RBP4.69□□□□□ -1.66
SMG1-207ENST00000563235 GATCO43716 136 aaKnown RBP4.69□□□□□ -1.66
SMG1-207ENST00000563235 CCNT2O60583 730 aaKnown RBP4.69□□□□□ -1.66
SMG1-207ENST00000563235 SCN2BO60939 215 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 USP12O75317 370 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 SEC14L2O76054 403 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 OR52Z1P0C646 297 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 ACHEP22303 614 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 HOXA9P31269 272 aa4.69□□□□□ -1.66
SMG1-207ENST00000563235 SERPINH1P50454 418 aaKnown RBP4.69□□□□□ -1.66
SMG1-207ENST00000563235 KCNQ4P56696 695 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms