RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 FCRL3Q96P31 734 aaPredicted RBP16.04■□□□□ 0.16
PKD1-226ENST00000562425 PANX3Q96QZ0 392 aa16.04■□□□□ 0.16
PKD1-226ENST00000562425 CMKLR1Q99788 373 aa16.04■□□□□ 0.16
PKD1-226ENST00000562425 EBNA1BP2Q99848 306 aaKnown RBP16.04■□□□□ 0.16
PKD1-226ENST00000562425 NUDT22Q9BRQ3 303 aa16.04■□□□□ 0.16
PKD1-226ENST00000562425 TBC1D10AQ9BXI6 508 aa16.04■□□□□ 0.16
PKD1-226ENST00000562425 FOXP3Q9BZS1 431 aa16.04■□□□□ 0.16
PKD1-226ENST00000562425 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.04■□□□□ 0.16
PKD1-226ENST00000562425 GNPTGQ9UJJ9 305 aa16.04■□□□□ 0.16
PKD1-226ENST00000562425 PCDHGA8Q9Y5G5 932 aa16.04■□□□□ 0.16
PKD1-226ENST00000562425 FAM169AQ9Y6X4 670 aa16.04■□□□□ 0.16
PKD1-226ENST00000562425 UNC13CQ8NB66 2214 aa16.04■□□□□ 0.16
PKD1-226ENST00000562425 ZCWPW2A0A1B0GU75 182 aa16.03■□□□□ 0.16
PKD1-226ENST00000562425 UBA6A0AVT1 1052 aaPredicted RBP16.03■□□□□ 0.16
PKD1-226ENST00000562425 H3BMM5 538 aa16.03■□□□□ 0.16
PKD1-226ENST00000562425 KPNA5O15131 536 aa16.03■□□□□ 0.16
PKD1-226ENST00000562425 MPOP05164 745 aa16.03■□□□□ 0.16
PKD1-226ENST00000562425 RBMS1P29558 406 aaKnown RBP16.03■□□□□ 0.16
PKD1-226ENST00000562425 MLLT3P42568 568 aaPredicted RBP16.03■□□□□ 0.16
PKD1-226ENST00000562425 PDX1P52945 283 aa16.03■□□□□ 0.16
PKD1-226ENST00000562425 LIMK2P53671 638 aa16.03■□□□□ 0.16
PKD1-226ENST00000562425 GABREP78334 506 aa16.03■□□□□ 0.16
PKD1-226ENST00000562425 DHX9Q08211 1270 aaKnown RBP16.03■□□□□ 0.16
PKD1-226ENST00000562425 GPR18Q14330 331 aa16.03■□□□□ 0.16
PKD1-226ENST00000562425 HIF1AQ16665 826 aa16.03■□□□□ 0.16
PKD1-226ENST00000562425 TYSND1Q2T9J0 566 aa16.03■□□□□ 0.16
PKD1-226ENST00000562425 ZNF658BQ4V348 819 aaPredicted RBP16.03■□□□□ 0.16
PKD1-226ENST00000562425 C3orf38Q5JPI3 329 aa16.03■□□□□ 0.16
PKD1-226ENST00000562425 RAB11FIP2Q7L804 512 aa16.03■□□□□ 0.16
PKD1-226ENST00000562425 FBXO39Q8N4B4 442 aa16.03■□□□□ 0.16
PKD1-226ENST00000562425 LILRA3Q8N6C8 439 aaPredicted RBP16.03■□□□□ 0.16
PKD1-226ENST00000562425 SPDYE1Q8NFV5 336 aaPredicted RBP16.03■□□□□ 0.16
PKD1-226ENST00000562425 ASZ1Q8WWH4 475 aa16.03■□□□□ 0.16
PKD1-226ENST00000562425 RMDN2Q96LZ7 410 aa16.03■□□□□ 0.16
PKD1-226ENST00000562425 RAB17Q9H0T7 212 aa16.03■□□□□ 0.16
PKD1-226ENST00000562425 OR52A5Q9H2C5 316 aa16.03■□□□□ 0.16
PKD1-226ENST00000562425 SEMA6CQ9H3T2 930 aa16.03■□□□□ 0.16
PKD1-226ENST00000562425 C20orf96Q9NUD7 363 aaPredicted RBP16.03■□□□□ 0.16
PKD1-226ENST00000562425 SATB2Q9UPW6 733 aa16.03■□□□□ 0.16
PKD1-226ENST00000562425 SNX24Q9Y343 169 aa16.03■□□□□ 0.16
PKD1-226ENST00000562425 UTP11Q9Y3A2 253 aaKnown RBP16.03■□□□□ 0.16
PKD1-226ENST00000562425 FLNBO75369 2602 aaKnown RBP16.03■□□□□ 0.16
PKD1-226ENST00000562425 IGHV5-10-1A0A0J9YXX1 117 aa16.02■□□□□ 0.16
PKD1-226ENST00000562425 GOLGA8KD6RF30 607 aa16.02■□□□□ 0.16
PKD1-226ENST00000562425 GOLGA8TH3BQL2 631 aa16.02■□□□□ 0.16
PKD1-226ENST00000562425 PLD2O14939 933 aa16.02■□□□□ 0.16
PKD1-226ENST00000562425 HGSO14964 777 aaPredicted RBP16.02■□□□□ 0.16
PKD1-226ENST00000562425 RAD51CO43502 376 aa16.02■□□□□ 0.16
PKD1-226ENST00000562425 APOA4P06727 396 aa16.02■□□□□ 0.16
PKD1-226ENST00000562425 RPL21P46778 160 aaKnown RBP16.02■□□□□ 0.16
PKD1-226ENST00000562425 ADARP55265 1226 aaKnown RBP16.02■□□□□ 0.16
PKD1-226ENST00000562425 EIF3BP55884 814 aaKnown RBP16.02■□□□□ 0.16
PKD1-226ENST00000562425 BOP1Q14137 746 aaKnown RBP16.02■□□□□ 0.16
PKD1-226ENST00000562425 PLCL1Q15111 1095 aa16.02■□□□□ 0.16
PKD1-226ENST00000562425 TMED2Q15363 201 aa16.02■□□□□ 0.16
PKD1-226ENST00000562425 SPANXN3Q5MJ09 141 aa16.02■□□□□ 0.16
PKD1-226ENST00000562425 IGF2-ASQ6U949 168 aa16.02■□□□□ 0.16
PKD1-226ENST00000562425 ZNF574Q6ZN55 896 aaPredicted RBP16.02■□□□□ 0.16
PKD1-226ENST00000562425 TMPRSS9Q7Z410 1059 aa16.02■□□□□ 0.16
PKD1-226ENST00000562425 MNS1Q8NEH6 495 aa16.02■□□□□ 0.16
PKD1-226ENST00000562425 KIF18AQ8NI77 898 aa16.02■□□□□ 0.16
PKD1-226ENST00000562425 FERD3LQ96RJ6 166 aa16.02■□□□□ 0.16
PKD1-226ENST00000562425 FAM167BQ9BTA0 163 aa16.02■□□□□ 0.16
PKD1-226ENST00000562425 P2RY12Q9H244 342 aa16.02■□□□□ 0.16
PKD1-226ENST00000562425 MVB12BQ9H7P6 319 aa16.02■□□□□ 0.16
PKD1-226ENST00000562425 INTS10Q9NVR2 710 aaKnown RBP16.02■□□□□ 0.16
PKD1-226ENST00000562425 WHRNQ9P202 907 aa16.02■□□□□ 0.16
PKD1-226ENST00000562425 PDP2Q9P2J9 529 aa16.02■□□□□ 0.16
PKD1-226ENST00000562425 CFAP20Q9Y6A4 193 aaKnown RBP16.02■□□□□ 0.16
PKD1-226ENST00000562425 PTPRQQ9UMZ3 2332 aa16.02■□□□□ 0.15
PKD1-226ENST00000562425 SLC5A10A0PJK1 596 aa16.01■□□□□ 0.15
PKD1-226ENST00000562425 DXOO77932 396 aaKnown RBP16.01■□□□□ 0.15
PKD1-226ENST00000562425 ESR1P03372 595 aa16.01■□□□□ 0.15
PKD1-226ENST00000562425 JMJD7P0C870 316 aa16.01■□□□□ 0.15
PKD1-226ENST00000562425 ITGB6P18564 788 aa16.01■□□□□ 0.15
PKD1-226ENST00000562425 PDHA2P29803 388 aa16.01■□□□□ 0.15
PKD1-226ENST00000562425 CSF2RBP32927 897 aa16.01■□□□□ 0.15
PKD1-226ENST00000562425 CSTF2P33240 577 aaKnown RBP eCLIP16.01■□□□□ 0.15
PKD1-226ENST00000562425 PREPP48147 710 aa16.01■□□□□ 0.15
PKD1-226ENST00000562425 BRD3Q15059 726 aa16.01■□□□□ 0.15
PKD1-226ENST00000562425 ZNF470Q6ECI4 717 aa16.01■□□□□ 0.15
PKD1-226ENST00000562425 FOXR1Q6PIV2 292 aa16.01■□□□□ 0.15
PKD1-226ENST00000562425 XKR5Q6UX68 686 aa16.01■□□□□ 0.15
PKD1-226ENST00000562425 CILP2Q8IUL8 1156 aa16.01■□□□□ 0.15
PKD1-226ENST00000562425 AGGF1Q8N302 714 aaeCLIP16.01■□□□□ 0.15
PKD1-226ENST00000562425 AGBL5Q8NDL9 886 aa16.01■□□□□ 0.15
PKD1-226ENST00000562425 GSDMBQ8TAX9 411 aa16.01■□□□□ 0.15
PKD1-226ENST00000562425 LPGAT1Q92604 370 aa16.01■□□□□ 0.15
PKD1-226ENST00000562425 TFGQ92734 400 aaPredicted RBP16.01■□□□□ 0.15
PKD1-226ENST00000562425 CCDC74BQ96LY2 380 aa16.01■□□□□ 0.15
PKD1-226ENST00000562425 TRIM56Q9BRZ2 755 aaKnown RBP16.01■□□□□ 0.15
PKD1-226ENST00000562425 KIR3DX1Q9H7L2 352 aa16.01■□□□□ 0.15
PKD1-226ENST00000562425 SETXQ7Z333 2677 aaKnown RBP16■□□□□ 0.15
PKD1-226ENST00000562425 PRAMEF33A0A0G2JMD5 474 aa16■□□□□ 0.15
PKD1-226ENST00000562425 KDM1AO60341 852 aa16■□□□□ 0.15
PKD1-226ENST00000562425 BRINP1O60477 761 aa16■□□□□ 0.15
PKD1-226ENST00000562425 THRAP10827 490 aa16■□□□□ 0.15
PKD1-226ENST00000562425 TYRP1P17643 537 aa16■□□□□ 0.15
PKD1-226ENST00000562425 FMO4P31512 558 aa16■□□□□ 0.15
PKD1-226ENST00000562425 CCR7P32248 378 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms