RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 KPNA5O15131 536 aa13.11□□□□□ -0.31
CDH1-204ENST00000562118 SNX2O60749 519 aa13.11□□□□□ -0.31
CDH1-204ENST00000562118 HAUS5O94927 633 aa13.11□□□□□ -0.31
CDH1-204ENST00000562118 SLC35G4P0C7Q5 338 aa13.11□□□□□ -0.31
CDH1-204ENST00000562118 CD1CP29017 333 aa13.11□□□□□ -0.31
CDH1-204ENST00000562118 PBLDP30039 288 aaPredicted RBP13.11□□□□□ -0.31
CDH1-204ENST00000562118 SSTR1P30872 391 aa13.11□□□□□ -0.31
CDH1-204ENST00000562118 DEKP35659 375 aaKnown RBP13.11□□□□□ -0.31
CDH1-204ENST00000562118 HALP42357 657 aa13.11□□□□□ -0.31
CDH1-204ENST00000562118 PREPP48147 710 aa13.11□□□□□ -0.31
CDH1-204ENST00000562118 EIF3BP55884 814 aaKnown RBP13.11□□□□□ -0.31
CDH1-204ENST00000562118 CFHR1Q03591 330 aa13.11□□□□□ -0.31
CDH1-204ENST00000562118 ZFP36L1Q07352 338 aaKnown RBP13.11□□□□□ -0.31
CDH1-204ENST00000562118 CAMK2BQ13554 666 aa13.11□□□□□ -0.31
CDH1-204ENST00000562118 BOP1Q14137 746 aaKnown RBP13.11□□□□□ -0.31
CDH1-204ENST00000562118 SEPT7Q16181 437 aaKnown RBP13.11□□□□□ -0.31
CDH1-204ENST00000562118 CNSTQ6PJW8 725 aa13.11□□□□□ -0.31
CDH1-204ENST00000562118 DHRS13Q6UX07 377 aa13.11□□□□□ -0.31
CDH1-204ENST00000562118 VRK3Q8IV63 474 aa13.11□□□□□ -0.31
CDH1-204ENST00000562118 KRT222Q8N1A0 295 aa13.11□□□□□ -0.31
CDH1-204ENST00000562118 GALNT15Q8N3T1 639 aa13.11□□□□□ -0.31
CDH1-204ENST00000562118 ASZ1Q8WWH4 475 aa13.11□□□□□ -0.31
CDH1-204ENST00000562118 ELMO1Q92556 727 aa13.11□□□□□ -0.31
CDH1-204ENST00000562118 GRAMD1AQ96CP6 724 aa13.11□□□□□ -0.31
CDH1-204ENST00000562118 CFAP36Q96G28 342 aa13.11□□□□□ -0.31
CDH1-204ENST00000562118 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.11□□□□□ -0.31
CDH1-204ENST00000562118 RAB33BQ9H082 229 aa13.11□□□□□ -0.31
CDH1-204ENST00000562118 LRRN3Q9H3W5 708 aa13.11□□□□□ -0.31
CDH1-204ENST00000562118 KIR3DX1Q9H7L2 352 aa13.11□□□□□ -0.31
CDH1-204ENST00000562118 OGFRQ9NZT2 677 aa13.11□□□□□ -0.31
CDH1-204ENST00000562118 CRYL1Q9Y2S2 319 aa13.11□□□□□ -0.31
CDH1-204ENST00000562118 NEUROG3Q9Y4Z2 214 aa13.11□□□□□ -0.31
CDH1-204ENST00000562118 HEBP2Q9Y5Z4 205 aa13.11□□□□□ -0.31
CDH1-204ENST00000562118 PSAT1Q9Y617 370 aa13.11□□□□□ -0.31
CDH1-204ENST00000562118 MN1Q10571 1320 aaPredicted RBP13.11□□□□□ -0.31
CDH1-204ENST00000562118 KNTC1P50748 2209 aa13.11□□□□□ -0.31
CDH1-204ENST00000562118 UBA6A0AVT1 1052 aaPredicted RBP13.1□□□□□ -0.31
CDH1-204ENST00000562118 MED19A0JLT2 244 aaPredicted RBP13.1□□□□□ -0.31
CDH1-204ENST00000562118 RHPN2P1A8MT19 583 aa13.1□□□□□ -0.31
CDH1-204ENST00000562118 NIPSNAP2O75323 286 aa13.1□□□□□ -0.31
CDH1-204ENST00000562118 WISP3O95389 354 aaPredicted RBP13.1□□□□□ -0.31
CDH1-204ENST00000562118 MATN4O95460 622 aa13.1□□□□□ -0.31
CDH1-204ENST00000562118 F7P08709 466 aaPredicted RBP13.1□□□□□ -0.31
CDH1-204ENST00000562118 NDUFS1P28331 727 aa13.1□□□□□ -0.31
CDH1-204ENST00000562118 FMO4P31512 558 aa13.1□□□□□ -0.31
CDH1-204ENST00000562118 CCKBRP32239 447 aa13.1□□□□□ -0.31
CDH1-204ENST00000562118 CSF2RBP32927 897 aa13.1□□□□□ -0.31
CDH1-204ENST00000562118 TUBB4BP68371 445 aa13.1□□□□□ -0.31
CDH1-204ENST00000562118 CCL7P80098 99 aa13.1□□□□□ -0.31
CDH1-204ENST00000562118 NAB1Q13506 487 aa13.1□□□□□ -0.31
CDH1-204ENST00000562118 GPR18Q14330 331 aa13.1□□□□□ -0.31
CDH1-204ENST00000562118 HES3Q5TGS1 186 aa13.1□□□□□ -0.31
CDH1-204ENST00000562118 PTRHD1Q6GMV3 140 aaKnown RBP13.1□□□□□ -0.31
CDH1-204ENST00000562118 WDR74Q6RFH5 385 aaPredicted RBP13.1□□□□□ -0.31
CDH1-204ENST00000562118 NEK10Q6ZWH5 1172 aa13.1□□□□□ -0.31
CDH1-204ENST00000562118 TMPRSS9Q7Z410 1059 aa13.1□□□□□ -0.31
CDH1-204ENST00000562118 SLITRK4Q8IW52 837 aa13.1□□□□□ -0.31
CDH1-204ENST00000562118 IFT20Q8IY31 132 aa13.1□□□□□ -0.31
CDH1-204ENST00000562118 CD200R1Q8TD46 325 aa13.1□□□□□ -0.31
CDH1-204ENST00000562118 C9orf72Q96LT7 481 aa13.1□□□□□ -0.31
CDH1-204ENST00000562118 DPYSL5Q9BPU6 564 aa13.1□□□□□ -0.31
CDH1-204ENST00000562118 MENTQ9BUN1 341 aa13.1□□□□□ -0.31
CDH1-204ENST00000562118 TMEM121BQ9BXQ6 578 aaPredicted RBP13.1□□□□□ -0.31
CDH1-204ENST00000562118 STN1Q9H668 368 aaKnown RBP13.1□□□□□ -0.31
CDH1-204ENST00000562118 MVB12BQ9H7P6 319 aa13.1□□□□□ -0.31
CDH1-204ENST00000562118 ANKZF1Q9H8Y5 726 aa13.1□□□□□ -0.31
CDH1-204ENST00000562118 NSMCE4AQ9NXX6 385 aa13.1□□□□□ -0.31
CDH1-204ENST00000562118 SEMA5BQ9P283 1151 aa13.1□□□□□ -0.31
CDH1-204ENST00000562118 SLC17A6Q9P2U8 582 aa13.1□□□□□ -0.31
CDH1-204ENST00000562118 GALPQ9UBC7 116 aa13.1□□□□□ -0.31
CDH1-204ENST00000562118 EPHA6Q9UF33 1036 aa13.1□□□□□ -0.31
CDH1-204ENST00000562118 MTRF1LQ9UGC7 380 aaKnown RBP13.1□□□□□ -0.31
CDH1-204ENST00000562118 DHRS7Q9Y394 339 aa13.1□□□□□ -0.31
CDH1-204ENST00000562118 ZFHX4Q86UP3 3567 aa13.1□□□□□ -0.31
CDH1-204ENST00000562118 PRAMEF33A0A0G2JMD5 474 aa13.09□□□□□ -0.31
CDH1-204ENST00000562118 CXorf49A8MYA2 514 aaPredicted RBP13.09□□□□□ -0.31
CDH1-204ENST00000562118 VIPP01282 170 aa13.09□□□□□ -0.31
CDH1-204ENST00000562118 C9P02748 559 aa13.09□□□□□ -0.31
CDH1-204ENST00000562118 RPLP0P05388 317 aaKnown RBP13.09□□□□□ -0.31
CDH1-204ENST00000562118 APOA4P06727 396 aa13.09□□□□□ -0.31
CDH1-204ENST00000562118 FDXRP22570 491 aa13.09□□□□□ -0.31
CDH1-204ENST00000562118 OR1D5P58170 312 aa13.09□□□□□ -0.31
CDH1-204ENST00000562118 UBAP2Q5T6F2 1119 aaKnown RBP13.09□□□□□ -0.31
CDH1-204ENST00000562118 UNC5DQ6UXZ4 953 aa13.09□□□□□ -0.31
CDH1-204ENST00000562118 CCNI2Q6ZMN8 369 aaPredicted RBP13.09□□□□□ -0.31
CDH1-204ENST00000562118 C3orf62Q6ZUJ4 267 aa13.09□□□□□ -0.31
CDH1-204ENST00000562118 ZC3HC1Q86WB0 502 aaKnown RBP13.09□□□□□ -0.31
CDH1-204ENST00000562118 CHCHD4Q8N4Q1 142 aa13.09□□□□□ -0.31
CDH1-204ENST00000562118 OTUD6BQ8N6M0 293 aa13.09□□□□□ -0.31
CDH1-204ENST00000562118 OR5K2Q8NHB8 316 aa13.09□□□□□ -0.31
CDH1-204ENST00000562118 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.09□□□□□ -0.31
CDH1-204ENST00000562118 TMEM159Q96B96 161 aa13.09□□□□□ -0.31
CDH1-204ENST00000562118 C12orf66Q96MD2 445 aa13.09□□□□□ -0.31
CDH1-204ENST00000562118 SLC30A3Q99726 388 aa13.09□□□□□ -0.31
CDH1-204ENST00000562118 TFB2MQ9H5Q4 396 aaKnown RBP13.09□□□□□ -0.31
CDH1-204ENST00000562118 NINJ2Q9NZG7 142 aa13.09□□□□□ -0.31
CDH1-204ENST00000562118 ZFATQ9P243 1243 aa13.09□□□□□ -0.31
CDH1-204ENST00000562118 SLC24A2Q9UI40 661 aa13.09□□□□□ -0.31
CDH1-204ENST00000562118 PSMD13Q9UNM6 376 aa13.09□□□□□ -0.31
CDH1-204ENST00000562118 ZW10O43264 779 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms