RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 ZNF37AP17032 561 aaPredicted RBP22.06■■□□□ 1.12
SYNGR3-202ENST00000562045 ETV4P43268 484 aa22.06■■□□□ 1.12
SYNGR3-202ENST00000562045 KPNA2P52292 529 aaKnown RBP22.06■■□□□ 1.12
SYNGR3-202ENST00000562045 WDR4P57081 412 aaKnown RBP22.06■■□□□ 1.12
SYNGR3-202ENST00000562045 FAM83EQ2M2I3 478 aa22.06■■□□□ 1.12
SYNGR3-202ENST00000562045 CCDC153Q494R4 210 aa22.06■■□□□ 1.12
SYNGR3-202ENST00000562045 N4BP2L1Q5TBK1 243 aaPredicted RBP22.06■■□□□ 1.12
SYNGR3-202ENST00000562045 DBX2Q6ZNG2 339 aa22.06■■□□□ 1.12
SYNGR3-202ENST00000562045 ZNF548Q8NEK5 533 aaPredicted RBP22.06■■□□□ 1.12
SYNGR3-202ENST00000562045 CCL4L1Q8NHW4 92 aa22.06■■□□□ 1.12
SYNGR3-202ENST00000562045 KCTD4Q8WVF5 259 aa22.06■■□□□ 1.12
SYNGR3-202ENST00000562045 FAM136AQ96C01 138 aa22.06■■□□□ 1.12
SYNGR3-202ENST00000562045 UBXN10Q96LJ8 280 aa22.06■■□□□ 1.12
SYNGR3-202ENST00000562045 PANX3Q96QZ0 392 aa22.06■■□□□ 1.12
SYNGR3-202ENST00000562045 ATXN10Q9UBB4 475 aa22.06■■□□□ 1.12
SYNGR3-202ENST00000562045 F8W8V4 182 aa22.05■■□□□ 1.12
SYNGR3-202ENST00000562045 QSOX1O00391 747 aa22.05■■□□□ 1.12
SYNGR3-202ENST00000562045 SH3BP5O60239 455 aa22.05■■□□□ 1.12
SYNGR3-202ENST00000562045 PCDHGA12O60330 932 aa22.05■■□□□ 1.12
SYNGR3-202ENST00000562045 AP2A2O94973 939 aa22.05■■□□□ 1.12
SYNGR3-202ENST00000562045 GMPRP36959 345 aa22.05■■□□□ 1.12
SYNGR3-202ENST00000562045 ARHGAP8P85298 464 aa22.05■■□□□ 1.12
SYNGR3-202ENST00000562045 ADGRG6Q86SQ4 1221 aa22.05■■□□□ 1.12
SYNGR3-202ENST00000562045 PAIP2Q9BPZ3 127 aaKnown RBP22.05■■□□□ 1.12
SYNGR3-202ENST00000562045 ZCCHC2Q9C0B9 1178 aaKnown RBP22.05■■□□□ 1.12
SYNGR3-202ENST00000562045 TMEM168Q9H0V1 697 aa22.05■■□□□ 1.12
SYNGR3-202ENST00000562045 C12orf65Q9H3J6 166 aaKnown RBP22.05■■□□□ 1.12
SYNGR3-202ENST00000562045 TMEM216Q9P0N5 145 aa22.05■■□□□ 1.12
SYNGR3-202ENST00000562045 PLEKHM1Q9Y4G2 1056 aa22.05■■□□□ 1.12
SYNGR3-202ENST00000562045 DGKBQ9Y6T7 804 aa22.05■■□□□ 1.12
SYNGR3-202ENST00000562045 DNAJC6O75061 913 aa22.04■■□□□ 1.12
SYNGR3-202ENST00000562045 LTA4HP09960 611 aaKnown RBP22.04■■□□□ 1.12
SYNGR3-202ENST00000562045 CCDC166P0CW27 439 aa22.04■■□□□ 1.12
SYNGR3-202ENST00000562045 KELP23276 732 aa22.04■■□□□ 1.12
SYNGR3-202ENST00000562045 HNRNPKP61978 463 aaKnown RBP eCLIP22.04■■□□□ 1.12
SYNGR3-202ENST00000562045 PRRT3Q5FWE3 981 aa22.04■■□□□ 1.12
SYNGR3-202ENST00000562045 AGAP9Q5VTM2 703 aa22.04■■□□□ 1.12
SYNGR3-202ENST00000562045 TAX1BP1Q86VP1 789 aa22.04■■□□□ 1.12
SYNGR3-202ENST00000562045 LMX1AQ8TE12 382 aa22.04■■□□□ 1.12
SYNGR3-202ENST00000562045 OR2AG1Q9H205 316 aa22.04■■□□□ 1.12
SYNGR3-202ENST00000562045 CARS2Q9HA77 564 aaKnown RBP22.04■■□□□ 1.12
SYNGR3-202ENST00000562045 RUVBL2Q9Y230 463 aaKnown RBP22.04■■□□□ 1.12
SYNGR3-202ENST00000562045 ZFC3H1O60293 1989 aaKnown RBP22.04■■□□□ 1.12
SYNGR3-202ENST00000562045 IQCF5A8MTL0 148 aa22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 TNFRSF10CO14798 259 aa22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 SLC30A4O14863 429 aa22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 PLIN3O60664 434 aa22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 RASGRP1O95267 797 aa22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 DHRS4L1P0CG22 281 aa22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 ZNF8P17098 575 aaPredicted RBP22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 GNPDA1P46926 289 aa22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 CLCN7P51798 805 aa22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 CSHL1Q14406 222 aa22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 TTC19Q6DKK2 380 aaPredicted RBP22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 KLC3Q6P597 504 aa22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 TMEM207Q6UWW9 146 aa22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 ARMC2Q8NEN0 867 aa22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 CD200R1Q8TD46 325 aa22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 NXNL1Q96CM4 212 aa22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 SCARF2Q96GP6 870 aaPredicted RBP22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 TSSK1BQ9BXA7 367 aa22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 NMRAL1Q9HBL8 299 aa22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 SARS2Q9NP81 518 aaKnown RBP22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 ZNF358Q9NW07 568 aa22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 DHRS7Q9Y394 339 aa22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 SPTBN4Q9H254 2564 aa22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 FFAR2O15552 330 aa22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 TRIM16O95361 564 aa22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 APOA4P06727 396 aa22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 TMEM115Q12893 351 aaPredicted RBP22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 SLC14A1Q13336 389 aa22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 C16orf46Q6P387 395 aa22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 PAQR3Q6TCH7 311 aa22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 PIP4P1Q86T03 277 aa22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 NKAPQ8N5F7 415 aaKnown RBP22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 CCDC63Q8NA47 563 aa22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 SIDT2Q8NBJ9 832 aaKnown RBP22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 ANKRD49Q8WVL7 239 aa22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 TRIM39Q9HCM9 518 aa22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 IGSF5Q9NSI5 407 aa22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 SPATS2LQ9NUQ6 558 aaKnown RBP22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 CDV3Q9UKY7 258 aaKnown RBP22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 EMCNQ9ULC0 261 aa22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 PCDHGB2Q9Y5G2 931 aa22.03■■□□□ 1.12
SYNGR3-202ENST00000562045 AQP9O43315 295 aa22.02■■□□□ 1.12
SYNGR3-202ENST00000562045 TNFP01375 233 aa22.02■■□□□ 1.12
SYNGR3-202ENST00000562045 PROCP04070 461 aa22.02■■□□□ 1.12
SYNGR3-202ENST00000562045 DLG1Q12959 904 aa22.02■■□□□ 1.12
SYNGR3-202ENST00000562045 DET1Q7L5Y6 550 aa22.02■■□□□ 1.12
SYNGR3-202ENST00000562045 NAXDQ8IW45 347 aa22.02■■□□□ 1.12
SYNGR3-202ENST00000562045 GALPQ9UBC7 116 aa22.02■■□□□ 1.12
SYNGR3-202ENST00000562045 H3BM21 787 aa22.01■■□□□ 1.11
SYNGR3-202ENST00000562045 TRIM38O00635 465 aa22.01■■□□□ 1.11
SYNGR3-202ENST00000562045 SERPINB4P48594 390 aa22.01■■□□□ 1.11
SYNGR3-202ENST00000562045 GNGT1P63211 74 aa22.01■■□□□ 1.11
SYNGR3-202ENST00000562045 ACAP2Q15057 778 aa22.01■■□□□ 1.11
SYNGR3-202ENST00000562045 PYCR3Q53H96 274 aa22.01■■□□□ 1.11
SYNGR3-202ENST00000562045 NRROSQ86YC3 692 aa22.01■■□□□ 1.11
SYNGR3-202ENST00000562045 SFTPA2Q8IWL1 248 aa22.01■■□□□ 1.11
SYNGR3-202ENST00000562045 SPATA6LQ8N4H0 392 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms