RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 METTL2BQ6P1Q9 378 aaKnown RBP10.1□□□□□ -0.79
USP3-219ENST00000561326 TTC23LQ6PF05 361 aa10.1□□□□□ -0.79
USP3-219ENST00000561326 CRTC3Q6UUV7 619 aa10.1□□□□□ -0.79
USP3-219ENST00000561326 NAPRTQ6XQN6 538 aa10.1□□□□□ -0.79
USP3-219ENST00000561326 ZCCHC23Q6ZST2 131 aa10.1□□□□□ -0.79
USP3-219ENST00000561326 PIGWQ7Z7B1 504 aa10.1□□□□□ -0.79
USP3-219ENST00000561326 GALNT13Q8IUC8 556 aa10.1□□□□□ -0.79
USP3-219ENST00000561326 WDR75Q8IWA0 830 aaKnown RBP10.1□□□□□ -0.79
USP3-219ENST00000561326 HOMEZQ8IX15 550 aa10.1□□□□□ -0.79
USP3-219ENST00000561326 SLC22A15Q8IZD6 547 aa10.1□□□□□ -0.79
USP3-219ENST00000561326 CACNA2D3Q8IZS8 1091 aa10.1□□□□□ -0.79
USP3-219ENST00000561326 TCAIMQ8N3R3 496 aa10.1□□□□□ -0.79
USP3-219ENST00000561326 AFAP1L2Q8N4X5 818 aa10.1□□□□□ -0.79
USP3-219ENST00000561326 PTGR2Q8N8N7 351 aaPredicted RBP10.1□□□□□ -0.79
USP3-219ENST00000561326 CADM4Q8NFZ8 388 aa10.1□□□□□ -0.79
USP3-219ENST00000561326 OR6Y1Q8NGX8 325 aa10.1□□□□□ -0.79
USP3-219ENST00000561326 MAGEC3Q8TD91 643 aa10.1□□□□□ -0.79
USP3-219ENST00000561326 ASB11Q8WXH4 323 aa10.1□□□□□ -0.79
USP3-219ENST00000561326 BIRC7Q96CA5 298 aa10.1□□□□□ -0.79
USP3-219ENST00000561326 L3HYPDHQ96EM0 354 aa10.1□□□□□ -0.79
USP3-219ENST00000561326 EGFL8Q99944 293 aa10.1□□□□□ -0.79
USP3-219ENST00000561326 SLC12A9Q9BXP2 914 aa10.1□□□□□ -0.79
USP3-219ENST00000561326 TPSD1Q9BZJ3 242 aa10.1□□□□□ -0.79
USP3-219ENST00000561326 DPEP2Q9H4A9 486 aa10.1□□□□□ -0.79
USP3-219ENST00000561326 RABEP2Q9H5N1 569 aa10.1□□□□□ -0.79
USP3-219ENST00000561326 C6orf106Q9H6K1 298 aaPredicted RBP10.1□□□□□ -0.79
USP3-219ENST00000561326 CYP4F12Q9HCS2 524 aa10.1□□□□□ -0.79
USP3-219ENST00000561326 FZD3Q9NPG1 666 aa10.1□□□□□ -0.79
USP3-219ENST00000561326 CD93Q9NPY3 652 aa10.1□□□□□ -0.79
USP3-219ENST00000561326 C2orf42Q9NWW7 574 aa10.1□□□□□ -0.79
USP3-219ENST00000561326 MOSPD1Q9UJG1 213 aa10.1□□□□□ -0.79
USP3-219ENST00000561326 ACSL5Q9ULC5 683 aa10.1□□□□□ -0.79
USP3-219ENST00000561326 SLC17A4Q9Y2C5 497 aa10.1□□□□□ -0.79
USP3-219ENST00000561326 SPTBN5Q9NRC6 3674 aaKnown RBP10.1□□□□□ -0.79
USP3-219ENST00000561326 CCDC163A0A0D9SF12 145 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 POM121BA6NF01 834 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 NEMP2A6NFY4 417 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 METTL12A8MUP2 240 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 SLCO1B7G3V0H7 640 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 GIPC1O14908 333 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 FFAR2O15552 330 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 KLK8O60259 260 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 LILRB5O75023 590 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 MATN4O95460 622 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 CEACAM5P06731 702 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 HOXA6P31267 233 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 RABIFP47224 123 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 HNMTP50135 292 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 AP1S2P56377 157 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 CLDN2P57739 230 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 CDKL1Q00532 357 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 OCRLQ01968 901 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 GALNT1Q10472 559 aaPredicted RBP10.09□□□□□ -0.79
USP3-219ENST00000561326 PRKAA1Q13131 559 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 NFATC4Q14934 902 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 TMEM31Q5JXX7 168 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 ZNF678Q5SXM1 525 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 METRNLQ641Q3 311 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 SBSNQ6UWP8 590 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 SPATA21Q7Z572 469 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 DCP2Q8IU60 420 aaKnown RBP10.09□□□□□ -0.79
USP3-219ENST00000561326 ZNF547Q8IVP9 402 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 CCDC197Q8NCU1 140 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 OR56A4Q8NGH8 313 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 RLN3Q8WXF3 142 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 BMFQ96LC9 184 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 WDR92Q96MX6 357 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 MYOCQ99972 504 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 SIKE1Q9BRV8 207 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 TIMM29Q9BSF4 260 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 COG4Q9H9E3 785 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 CD320Q9NPF0 282 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 SPATA6Q9NWH7 488 aaPredicted RBP10.09□□□□□ -0.79
USP3-219ENST00000561326 ARL15Q9NXU5 204 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 UTP6Q9NYH9 597 aaKnown RBP10.09□□□□□ -0.79
USP3-219ENST00000561326 KLHL14Q9P2G3 628 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 FAM8A1Q9UBU6 413 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 TSR3Q9UJK0 312 aaKnown RBP10.09□□□□□ -0.79
USP3-219ENST00000561326 CDYLQ9Y232 598 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 RAP2CQ9Y3L5 183 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 COL6A3P12111 3177 aa10.09□□□□□ -0.79
USP3-219ENST00000561326 KNL1Q8NG31 2342 aa10.08□□□□□ -0.8
USP3-219ENST00000561326 A0A1W2PPC4 97 aa10.08□□□□□ -0.8
USP3-219ENST00000561326 PRSS38A1L453 326 aa10.08□□□□□ -0.8
USP3-219ENST00000561326 TMEM202A6NGA9 273 aa10.08□□□□□ -0.8
USP3-219ENST00000561326 NCF1BA6NI72 391 aaPredicted RBP10.08□□□□□ -0.8
USP3-219ENST00000561326 NCF1CA8MVU1 366 aaPredicted RBP10.08□□□□□ -0.8
USP3-219ENST00000561326 C10orf142B7Z368 130 aa10.08□□□□□ -0.8
USP3-219ENST00000561326 IFRD1O00458 451 aaPredicted RBP10.08□□□□□ -0.8
USP3-219ENST00000561326 DCXO43602 365 aa10.08□□□□□ -0.8
USP3-219ENST00000561326 ITM2AO43736 263 aa10.08□□□□□ -0.8
USP3-219ENST00000561326 SNX3O60493 162 aa10.08□□□□□ -0.8
USP3-219ENST00000561326 MLYCDO95822 493 aa10.08□□□□□ -0.8
USP3-219ENST00000561326 GUCA1CO95843 209 aa10.08□□□□□ -0.8
USP3-219ENST00000561326 RPN2P04844 631 aa10.08□□□□□ -0.8
USP3-219ENST00000561326 IGHV4-34P06331 123 aa10.08□□□□□ -0.8
USP3-219ENST00000561326 NCF1P14598 390 aaPredicted RBP10.08□□□□□ -0.8
USP3-219ENST00000561326 IDSP22304 550 aa10.08□□□□□ -0.8
USP3-219ENST00000561326 CD27P26842 260 aa10.08□□□□□ -0.8
USP3-219ENST00000561326 EEF1DP29692 281 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms