RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 AZIN2Q96A70 460 aa13.27□□□□□ -0.28
TRAF3-208ENST00000560371 EIF2B4Q9UI10 523 aaKnown RBP13.27□□□□□ -0.28
TRAF3-208ENST00000560371 DAPK2Q9UIK4 370 aa13.27□□□□□ -0.28
TRAF3-208ENST00000560371 HCN1O60741 890 aa13.27□□□□□ -0.29
TRAF3-208ENST00000560371 ZNF8P17098 575 aaPredicted RBP13.27□□□□□ -0.29
TRAF3-208ENST00000560371 PBX1P40424 430 aa13.27□□□□□ -0.29
TRAF3-208ENST00000560371 CTSKP43235 329 aa13.27□□□□□ -0.29
TRAF3-208ENST00000560371 Q6ZVU0 165 aa13.27□□□□□ -0.29
TRAF3-208ENST00000560371 NTAN1Q96AB6 310 aa13.27□□□□□ -0.29
TRAF3-208ENST00000560371 TRNT1Q96Q11 434 aaKnown RBP13.27□□□□□ -0.29
TRAF3-208ENST00000560371 PRR5-ARHGAP8B1AHC4 643 aa13.27□□□□□ -0.29
TRAF3-208ENST00000560371 CASP9P55211 416 aa13.27□□□□□ -0.29
TRAF3-208ENST00000560371 ARHGAP8P85298 464 aa13.27□□□□□ -0.29
TRAF3-208ENST00000560371 ZNF776Q68DI1 518 aaPredicted RBP13.27□□□□□ -0.29
TRAF3-208ENST00000560371 GK5Q6ZS86 529 aa13.27□□□□□ -0.29
TRAF3-208ENST00000560371 LRRTM4Q86VH4 590 aa13.27□□□□□ -0.29
TRAF3-208ENST00000560371 MPP4Q96JB8 637 aa13.27□□□□□ -0.29
TRAF3-208ENST00000560371 TAPBPLQ9BX59 468 aa13.27□□□□□ -0.29
TRAF3-208ENST00000560371 RHBDL2Q9NX52 303 aa13.27□□□□□ -0.29
TRAF3-208ENST00000560371 REXO2Q9Y3B8 237 aaKnown RBP13.27□□□□□ -0.29
TRAF3-208ENST00000560371 RNF225M0QZC1 329 aaPredicted RBP13.27□□□□□ -0.29
TRAF3-208ENST00000560371 TLX3O43711 291 aaPredicted RBP13.27□□□□□ -0.29
TRAF3-208ENST00000560371 SCGNO76038 276 aa13.27□□□□□ -0.29
TRAF3-208ENST00000560371 VNN1O95497 513 aa13.27□□□□□ -0.29
TRAF3-208ENST00000560371 UNGP13051 313 aaPredicted RBP13.27□□□□□ -0.29
TRAF3-208ENST00000560371 OGNP20774 298 aaKnown RBP13.27□□□□□ -0.29
TRAF3-208ENST00000560371 CCKBRP32239 447 aa13.27□□□□□ -0.29
TRAF3-208ENST00000560371 MPIP34949 423 aa13.27□□□□□ -0.29
TRAF3-208ENST00000560371 SRP54P61011 504 aaKnown RBP13.27□□□□□ -0.29
TRAF3-208ENST00000560371 TEAD2Q15562 447 aa13.27□□□□□ -0.29
TRAF3-208ENST00000560371 ANKRD46Q86W74 232 aa13.27□□□□□ -0.29
TRAF3-208ENST00000560371 ATCAYQ86WG3 371 aa13.27□□□□□ -0.29
TRAF3-208ENST00000560371 ZNF599Q96NL3 588 aa13.27□□□□□ -0.29
TRAF3-208ENST00000560371 ANKHQ9HCJ1 492 aa13.27□□□□□ -0.29
TRAF3-208ENST00000560371 ZNF180Q9UJW8 692 aa13.27□□□□□ -0.29
TRAF3-208ENST00000560371 ATG2BQ96BY7 2078 aa13.27□□□□□ -0.29
TRAF3-208ENST00000560371 LIN7AO14910 233 aaPredicted RBP13.27□□□□□ -0.29
TRAF3-208ENST00000560371 PGRMC2O15173 223 aa13.27□□□□□ -0.29
TRAF3-208ENST00000560371 WFS1O76024 890 aa13.27□□□□□ -0.29
TRAF3-208ENST00000560371 CPN2P22792 545 aa13.27□□□□□ -0.29
TRAF3-208ENST00000560371 MTHFRP42898 656 aa13.27□□□□□ -0.29
TRAF3-208ENST00000560371 PUS10Q3MIT2 529 aaKnown RBP13.27□□□□□ -0.29
TRAF3-208ENST00000560371 FBXL22Q6P050 247 aa13.27□□□□□ -0.29
TRAF3-208ENST00000560371 IKBIPQ70UQ0 350 aa13.27□□□□□ -0.29
TRAF3-208ENST00000560371 AVL9Q8NBF6 648 aa13.27□□□□□ -0.29
TRAF3-208ENST00000560371 EIF2B3Q9NR50 452 aaKnown RBP13.27□□□□□ -0.29
TRAF3-208ENST00000560371 IRAK3Q9Y616 596 aa13.27□□□□□ -0.29
TRAF3-208ENST00000560371 MLLT3P42568 568 aaPredicted RBP13.26□□□□□ -0.29
TRAF3-208ENST00000560371 GLYATQ6IB77 296 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 ZNF516Q92618 1163 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 RAD9AQ99638 391 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 BCO2Q9BYV7 579 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 CALML5Q9NZT1 146 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 GABRQQ9UN88 632 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 IRGMA1A4Y4 181 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 CCDC162PA2VCL2 907 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 KPNA4O00629 521 aaPredicted RBP13.26□□□□□ -0.29
TRAF3-208ENST00000560371 PRKCHP24723 683 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 CLCN7P51798 805 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 SLC1A5Q15758 541 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 SFRP1Q8N474 314 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 ZNF384Q8TF68 577 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 ZNF296Q8WUU4 475 aaPredicted RBP13.26□□□□□ -0.29
TRAF3-208ENST00000560371 MIPEPQ99797 713 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 OSBPL2Q9H1P3 480 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 ITM2CQ9NQX7 267 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 CREBZFQ9NS37 354 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 PIGVQ9NUD9 493 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 EHD3Q9NZN3 535 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 BTBD3Q9Y2F9 522 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 CASRP41180 1078 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 SLC11A1P49279 550 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 OR2AP1Q8NGE2 309 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 HCAR2Q8TDS4 363 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 MAP2K7O14733 419 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 KHDRBS3O75525 346 aaKnown RBP13.26□□□□□ -0.29
TRAF3-208ENST00000560371 PIGRP01833 764 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 PTPN5P54829 565 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 SUZ12Q15022 739 aaKnown RBP13.26□□□□□ -0.29
TRAF3-208ENST00000560371 AP3S1Q92572 193 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 NDC1Q9BTX1 674 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 LRMDAQ9H2I8 198 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 KCNE1P15382 129 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 CLCNKAP51800 687 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 RANBP3LQ86VV4 465 aaPredicted RBP13.26□□□□□ -0.29
TRAF3-208ENST00000560371 MCCC2Q9HCC0 563 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 TMEM138Q9NPI0 162 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 IGSF9Q9P2J2 1179 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 INSL5Q9Y5Q6 135 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 LCA5LO95447 670 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 KLK3P07288 261 aaPredicted RBP13.26□□□□□ -0.29
TRAF3-208ENST00000560371 LYNP07948 512 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 RPP38P78345 283 aaKnown RBP13.26□□□□□ -0.29
TRAF3-208ENST00000560371 ATP1A4Q13733 1029 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 ZNF460Q14592 562 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 LIN54Q6MZP7 749 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 SMPDL3BQ92485 455 aa13.26□□□□□ -0.29
TRAF3-208ENST00000560371 RUVBL1Q9Y265 456 aaKnown RBP13.26□□□□□ -0.29
TRAF3-208ENST00000560371 FAM92AA1XBS5 289 aa13.25□□□□□ -0.29
TRAF3-208ENST00000560371 UGT1A9O60656 530 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms