RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 TUBB1Q9H4B7 451 aa12.44□□□□□ -0.42
USP3-213ENST00000559711 SERGEFQ9UGK8 458 aa12.44□□□□□ -0.42
USP3-213ENST00000559711 STK38LQ9Y2H1 464 aa12.44□□□□□ -0.42
USP3-213ENST00000559711 PIAS3Q9Y6X2 628 aa12.44□□□□□ -0.42
USP3-213ENST00000559711 UNC80Q8N2C7 3258 aa12.44□□□□□ -0.42
USP3-213ENST00000559711 A0A1W2PQF6 199 aa12.43□□□□□ -0.42
USP3-213ENST00000559711 TMEM202A6NGA9 273 aa12.43□□□□□ -0.42
USP3-213ENST00000559711 IGLON5A6NGN9 336 aa12.43□□□□□ -0.42
USP3-213ENST00000559711 GIPC1O14908 333 aa12.43□□□□□ -0.42
USP3-213ENST00000559711 VEGFDO43915 354 aa12.43□□□□□ -0.42
USP3-213ENST00000559711 MGRN1O60291 552 aa12.43□□□□□ -0.42
USP3-213ENST00000559711 ADAM23O75077 832 aa12.43□□□□□ -0.42
USP3-213ENST00000559711 TM7SF2O76062 418 aa12.43□□□□□ -0.42
USP3-213ENST00000559711 PIK3R1P27986 724 aa12.43□□□□□ -0.42
USP3-213ENST00000559711 CPA2P48052 419 aa12.43□□□□□ -0.42
USP3-213ENST00000559711 HSPA7P48741 367 aa12.43□□□□□ -0.42
USP3-213ENST00000559711 SMAD4Q13485 552 aaKnown RBP12.43□□□□□ -0.42
USP3-213ENST00000559711 STARD3Q14849 445 aa12.43□□□□□ -0.42
USP3-213ENST00000559711 PON2Q15165 354 aa12.43□□□□□ -0.42
USP3-213ENST00000559711 RBBP7Q16576 425 aa12.43□□□□□ -0.42
USP3-213ENST00000559711 CYB5D1Q6P9G0 228 aa12.43□□□□□ -0.42
USP3-213ENST00000559711 TRMT11Q7Z4G4 463 aaKnown RBP12.43□□□□□ -0.42
USP3-213ENST00000559711 PLCD3Q8N3E9 789 aa12.43□□□□□ -0.42
USP3-213ENST00000559711 TCAIMQ8N3R3 496 aa12.43□□□□□ -0.42
USP3-213ENST00000559711 RBM15BQ8NDT2 890 aaKnown RBP12.43□□□□□ -0.42
USP3-213ENST00000559711 GLMNQ92990 594 aa12.43□□□□□ -0.42
USP3-213ENST00000559711 COX14Q96I36 57 aa12.43□□□□□ -0.42
USP3-213ENST00000559711 LINC00615Q96LM1 132 aaPredicted RBP12.43□□□□□ -0.42
USP3-213ENST00000559711 CATSPER2Q96P56 530 aa12.43□□□□□ -0.42
USP3-213ENST00000559711 LENG8Q96PV6 779 aaPredicted RBP12.43□□□□□ -0.42
USP3-213ENST00000559711 KCNA7Q96RP8 456 aa12.43□□□□□ -0.42
USP3-213ENST00000559711 CCT7Q99832 543 aa12.43□□□□□ -0.42
USP3-213ENST00000559711 TRIM54Q9BYV2 358 aa12.43□□□□□ -0.42
USP3-213ENST00000559711 MKRN2Q9H000 416 aaKnown RBP12.43□□□□□ -0.42
USP3-213ENST00000559711 ZMYND15Q9H091 742 aa12.43□□□□□ -0.42
USP3-213ENST00000559711 NOL11Q9H8H0 719 aaKnown RBP12.43□□□□□ -0.42
USP3-213ENST00000559711 CD248Q9HCU0 757 aa12.43□□□□□ -0.42
USP3-213ENST00000559711 HEBP1Q9NRV9 189 aa12.43□□□□□ -0.42
USP3-213ENST00000559711 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.43□□□□□ -0.42
USP3-213ENST00000559711 LIMD1Q9UGP4 676 aa12.43□□□□□ -0.42
USP3-213ENST00000559711 GPR34Q9UPC5 381 aa12.43□□□□□ -0.42
USP3-213ENST00000559711 COPG1Q9Y678 874 aaKnown RBP12.43□□□□□ -0.42
USP3-213ENST00000559711 SPTBN5Q9NRC6 3674 aaKnown RBP12.43□□□□□ -0.42
USP3-213ENST00000559711 A0A1W2PP55 124 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 K7EPI3 171 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 OR7A17O14581 309 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 PIP5K1BO14986 540 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 UBDO15205 165 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 MBTPS2O43462 519 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 VPS4BO75351 444 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 OTCP00480 354 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 GSTM1P09488 218 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 THRAP10827 490 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 COX4I1P13073 169 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 GLULP15104 373 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 CPOXP36551 454 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 HNMTP50135 292 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 AP1S2P56377 157 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 ERVPABLB-1P60509 514 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 MRPS21P82921 87 aaKnown RBP12.42□□□□□ -0.42
USP3-213ENST00000559711 GSTM4Q03013 218 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 GRSF1Q12849 480 aaKnown RBP eCLIP12.42□□□□□ -0.42
USP3-213ENST00000559711 HERC3Q15034 1050 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 FAM219BQ5XKK7 198 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 FBXW10Q5XX13 1052 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 PNCKQ6P2M8 343 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 POU5F2Q8N7G0 328 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 PLA2G15Q8NCC3 412 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 OR52B6Q8NGF0 335 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 FBXO27Q8NI29 283 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 MCOLN3Q8TDD5 553 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 TMEM159Q96B96 161 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 HIC2Q96JB3 615 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 OR2AG1Q9H205 316 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 AKTIPQ9H8T0 292 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 IPPKQ9H8X2 491 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 BRWD1Q9NSI6 2320 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 KLC4Q9NSK0 619 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 ARL15Q9NXU5 204 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 WWOXQ9NZC7 414 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 ATXN10Q9UBB4 475 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 OPTCQ9UBM4 332 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 GULP1Q9UBP9 304 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 C17orf113A0A1B0GUU1 675 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 PSIP1O75475 530 aaKnown RBP12.42□□□□□ -0.42
USP3-213ENST00000559711 CRCPO75575 148 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 STK16O75716 305 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 RNASEH2AO75792 299 aaKnown RBP12.42□□□□□ -0.42
USP3-213ENST00000559711 OR4F21O95013 312 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 PCDH8O95206 1070 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 KLF8O95600 359 aaPredicted RBP12.42□□□□□ -0.42
USP3-213ENST00000559711 CHEK2O96017 543 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 HIST1H2AGP0C0S8 130 aaPredicted RBP12.42□□□□□ -0.42
USP3-213ENST00000559711 HIST1H2ADP20671 130 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 CYP2A7P20853 494 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 TEAD1P28347 426 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 MAPK9P45984 424 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 ATP4BP51164 291 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 TRAF3Q13114 568 aa12.42□□□□□ -0.42
USP3-213ENST00000559711 RIPK1Q13546 671 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms