RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 GPR174Q9BXC1 333 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 POLR1BQ9H9Y6 1135 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 SCN3BQ9NY72 215 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 BTRCQ9Y297 605 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 TMEM98Q9Y2Y6 226 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 EP400Q96L91 3159 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 RHPN2P1A8MT19 583 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 MRASO14807 208 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 FFAR2O15552 330 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 POP7O75817 140 aaKnown RBP10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 ADH1BP00325 375 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 KLKB1P03952 638 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 FYNP06241 537 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 SRCP12931 536 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 ITGB8P26012 769 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 HNF1BP35680 557 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 CNTN1Q12860 1018 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 NFYCQ13952 458 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 NR1D2Q14995 579 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 TSNQ15631 228 aaKnown RBP10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 C6orf52Q5T4I8 152 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 GPR107Q5VW38 600 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 DNAJC14Q6Y2X3 702 aaPredicted RBP10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 ENDOVQ8N8Q3 282 aaKnown RBP10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 RCN3Q96D15 328 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 LRIG1Q96JA1 1093 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 RMND5AQ9H871 391 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 FAM32AQ9Y421 112 aaKnown RBP10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 PRKAB1Q9Y478 270 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 SNX8Q9Y5X2 465 aa10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 RP1L1Q8IWN7 2480 aaPredicted RBP10.5□□□□□ -0.73
CARMIL3-202ENST00000559694 WASH3PC4AMC7 463 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 HOXC8P31273 242 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 HSPA7P48741 367 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 CCR3P51677 355 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 NIPAL4Q0D2K0 466 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 FASTKQ14296 549 aaKnown RBP10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 LIPMQ5VYY2 423 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 PAQR3Q6TCH7 311 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 SYT12Q8IV01 421 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 ZNF655Q8N720 491 aaPredicted RBP10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 COL26A1Q96A83 441 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 C7orf26Q96N11 449 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 SLC38A3Q99624 504 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 TRPC4Q9UBN4 977 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 NUMBLQ9Y6R0 609 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 A0A088AWK7 358 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 BIRC5O15392 142 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 COL6A2P12110 1019 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 HMGA1P17096 107 aaKnown RBP10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 ZNF10P21506 573 aaPredicted RBP10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 CDH3P22223 829 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 TTKP33981 857 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 CHI3L1P36222 383 aaPredicted RBP10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 PERM1Q5SV97 790 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 TXNDC11Q6PKC3 985 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 GPR149Q86SP6 731 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 TMPRSS11BQ86T26 416 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 PARGQ86W56 976 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 VN1R2Q8NFZ6 395 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 SEC14L1Q92503 715 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 RERGQ96A58 199 aaPredicted RBP10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 SIGLEC10Q96LC7 697 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 MYRFLQ96LU7 910 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 BBS4Q96RK4 519 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 PIF1Q9H611 641 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 NOL6Q9H6R4 1146 aaKnown RBP10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 INTS10Q9NVR2 710 aaKnown RBP10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 ZNF180Q9UJW8 692 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 PPM1HQ9ULR3 514 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 MYO18AQ92614 2054 aaKnown RBP10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 A0A1W2PQU0 124 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 FAM170BA6NMN3 283 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 SRPRAP08240 638 aaKnown RBP10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 RPL10P27635 214 aaKnown RBP10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 EPHA3P29320 983 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 ETV3P41162 512 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 SLC6A11P48066 632 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 CLCN4P51793 760 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 CYP4F2P78329 520 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 MAD2L1Q13257 205 aaPredicted RBP10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 MRPL58Q14197 206 aaKnown RBP10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 CNTD1Q8N815 330 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 BTBD9Q96Q07 612 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 TRIT1Q9H3H1 467 aaKnown RBP10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 PNPLA3Q9NST1 481 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 MYO1GB0I1T2 1018 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 HHLA1C9JL84 531 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 PLK4O00444 970 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 MID1O15344 667 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 CYP17A1P05093 508 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 CTSOP43234 321 aaPredicted RBP10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 PRKCQQ04759 706 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 CST6Q15828 149 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 DUSP6Q16828 381 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 SAMD4BQ5PRF9 694 aaKnown RBP10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 TRAF7Q6Q0C0 670 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 CYP20A1Q6UW02 462 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 GPR135Q8IZ08 494 aa10.49□□□□□ -0.73
CARMIL3-202ENST00000559694 TAGAPQ8N103 731 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms