RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 ZNF658BQ4V348 819 aaPredicted RBP12.28□□□□□ -0.44
LRRC28-214ENST00000559433 PCID2Q5JVF3 399 aa12.28□□□□□ -0.44
LRRC28-214ENST00000559433 LYPLAL1Q5VWZ2 237 aa12.28□□□□□ -0.44
LRRC28-214ENST00000559433 KIAA1614Q5VZ46 1190 aa12.28□□□□□ -0.44
LRRC28-214ENST00000559433 CAPRIN2Q6IMN6 1127 aaKnown RBP12.28□□□□□ -0.44
LRRC28-214ENST00000559433 CYB5D1Q6P9G0 228 aa12.28□□□□□ -0.44
LRRC28-214ENST00000559433 OOSP2Q86WS3 158 aa12.28□□□□□ -0.44
LRRC28-214ENST00000559433 CACNA2D3Q8IZS8 1091 aa12.28□□□□□ -0.44
LRRC28-214ENST00000559433 SLC35F6Q8N357 371 aa12.28□□□□□ -0.44
LRRC28-214ENST00000559433 RASGEF1CQ8N431 466 aa12.28□□□□□ -0.44
LRRC28-214ENST00000559433 OR4L1Q8NH43 312 aa12.28□□□□□ -0.44
LRRC28-214ENST00000559433 SNRNP27Q8WVK2 155 aaKnown RBP12.28□□□□□ -0.44
LRRC28-214ENST00000559433 ZFPM2Q8WW38 1151 aa12.28□□□□□ -0.44
LRRC28-214ENST00000559433 ANP32BQ92688 251 aaKnown RBP12.28□□□□□ -0.44
LRRC28-214ENST00000559433 KIAA1143Q96AT1 154 aaPredicted RBP12.28□□□□□ -0.44
LRRC28-214ENST00000559433 ZNF778Q96MU6 729 aa12.28□□□□□ -0.44
LRRC28-214ENST00000559433 NAP1L3Q99457 506 aaPredicted RBP12.28□□□□□ -0.44
LRRC28-214ENST00000559433 TTC1Q99614 292 aa12.28□□□□□ -0.44
LRRC28-214ENST00000559433 AP1M1Q9BXS5 423 aa12.28□□□□□ -0.44
LRRC28-214ENST00000559433 RAB33BQ9H082 229 aa12.28□□□□□ -0.44
LRRC28-214ENST00000559433 OR52A5Q9H2C5 316 aa12.28□□□□□ -0.44
LRRC28-214ENST00000559433 APMAPQ9HDC9 416 aa12.28□□□□□ -0.44
LRRC28-214ENST00000559433 CHRAC1Q9NRG0 131 aa12.28□□□□□ -0.44
LRRC28-214ENST00000559433 SIDT1Q9NXL6 827 aaKnown RBP12.28□□□□□ -0.44
LRRC28-214ENST00000559433 EPHA6Q9UF33 1036 aa12.28□□□□□ -0.44
LRRC28-214ENST00000559433 SLC24A2Q9UI40 661 aa12.28□□□□□ -0.44
LRRC28-214ENST00000559433 TTC7AQ9ULT0 858 aaPredicted RBP12.28□□□□□ -0.44
LRRC28-214ENST00000559433 OR5K3A6NET4 321 aa12.27□□□□□ -0.45
LRRC28-214ENST00000559433 AP3B1O00203 1094 aa12.27□□□□□ -0.45
LRRC28-214ENST00000559433 PGRMC1O00264 195 aaKnown RBP12.27□□□□□ -0.45
LRRC28-214ENST00000559433 KIF5CO60282 957 aa12.27□□□□□ -0.45
LRRC28-214ENST00000559433 OR1I1O60431 355 aa12.27□□□□□ -0.45
LRRC28-214ENST00000559433 RAD1O60671 282 aa12.27□□□□□ -0.45
LRRC28-214ENST00000559433 KRT14P02533 472 aa12.27□□□□□ -0.45
LRRC28-214ENST00000559433 TPSB2P20231 275 aa12.27□□□□□ -0.45
LRRC28-214ENST00000559433 MAP4P27816 1152 aaKnown RBP12.27□□□□□ -0.45
LRRC28-214ENST00000559433 PDHA2P29803 388 aa12.27□□□□□ -0.45
LRRC28-214ENST00000559433 GPS1Q13098 491 aa12.27□□□□□ -0.45
LRRC28-214ENST00000559433 RPA4Q13156 261 aa12.27□□□□□ -0.45
LRRC28-214ENST00000559433 TPSAB1Q15661 275 aa12.27□□□□□ -0.45
LRRC28-214ENST00000559433 SYTL3Q4VX76 610 aa12.27□□□□□ -0.45
LRRC28-214ENST00000559433 FASTKD1Q53R41 847 aaKnown RBP12.27□□□□□ -0.45
LRRC28-214ENST00000559433 DNTTIP2Q5QJE6 756 aaKnown RBP12.27□□□□□ -0.45
LRRC28-214ENST00000559433 TTC27Q6P3X3 843 aa12.27□□□□□ -0.45
LRRC28-214ENST00000559433 CERS6Q6ZMG9 384 aa12.27□□□□□ -0.45
LRRC28-214ENST00000559433 ZNF534Q76KX8 674 aa12.27□□□□□ -0.45
LRRC28-214ENST00000559433 ACVR1CQ8NER5 493 aa12.27□□□□□ -0.45
LRRC28-214ENST00000559433 ELMO1Q92556 727 aa12.27□□□□□ -0.45
LRRC28-214ENST00000559433 PEX13Q92968 403 aa12.27□□□□□ -0.45
LRRC28-214ENST00000559433 NKD1Q969G9 470 aa12.27□□□□□ -0.45
LRRC28-214ENST00000559433 MAGOHBQ96A72 148 aaKnown RBP12.27□□□□□ -0.45
LRRC28-214ENST00000559433 FERD3LQ96RJ6 166 aa12.27□□□□□ -0.45
LRRC28-214ENST00000559433 EFHD1Q9BUP0 239 aa12.27□□□□□ -0.45
LRRC28-214ENST00000559433 IL22Q9GZX6 179 aa12.27□□□□□ -0.45
LRRC28-214ENST00000559433 TRIT1Q9H3H1 467 aaKnown RBP12.27□□□□□ -0.45
LRRC28-214ENST00000559433 CATSPERZQ9NTU4 200 aa12.27□□□□□ -0.45
LRRC28-214ENST00000559433 HRASLS2Q9NWW9 162 aa12.27□□□□□ -0.45
LRRC28-214ENST00000559433 TRMT1Q9NXH9 659 aaKnown RBP12.27□□□□□ -0.45
LRRC28-214ENST00000559433 BFARQ9NZS9 450 aa12.27□□□□□ -0.45
LRRC28-214ENST00000559433 ATMQ13315 3056 aa12.26□□□□□ -0.45
LRRC28-214ENST00000559433 SMG1Q96Q15 3661 aaKnown RBP12.26□□□□□ -0.45
LRRC28-214ENST00000559433 UBA6A0AVT1 1052 aaPredicted RBP12.26□□□□□ -0.45
LRRC28-214ENST00000559433 OR6C74A6NCV1 312 aa12.26□□□□□ -0.45
LRRC28-214ENST00000559433 F8W8V4 182 aa12.26□□□□□ -0.45
LRRC28-214ENST00000559433 LIN7AO14910 233 aaPredicted RBP12.26□□□□□ -0.45
LRRC28-214ENST00000559433 MAP3K7O43318 606 aa12.26□□□□□ -0.45
LRRC28-214ENST00000559433 STK17BO94768 372 aa12.26□□□□□ -0.45
LRRC28-214ENST00000559433 PRB1P04280 392 aa12.26□□□□□ -0.45
LRRC28-214ENST00000559433 OR56A5P0C7T3 313 aa12.26□□□□□ -0.45
LRRC28-214ENST00000559433 MGAT1P26572 445 aa12.26□□□□□ -0.45
LRRC28-214ENST00000559433 PPARGP37231 505 aaPredicted RBP12.26□□□□□ -0.45
LRRC28-214ENST00000559433 ARCN1P48444 511 aaKnown RBP12.26□□□□□ -0.45
LRRC28-214ENST00000559433 CD151P48509 253 aa12.26□□□□□ -0.45
LRRC28-214ENST00000559433 NPY2RP49146 381 aa12.26□□□□□ -0.45
LRRC28-214ENST00000559433 SH3BP2P78314 561 aa12.26□□□□□ -0.45
LRRC28-214ENST00000559433 CDK16Q00536 496 aa12.26□□□□□ -0.45
LRRC28-214ENST00000559433 BOP1Q14137 746 aaKnown RBP12.26□□□□□ -0.45
LRRC28-214ENST00000559433 SEMA3AQ14563 771 aa12.26□□□□□ -0.45
LRRC28-214ENST00000559433 BRD3Q15059 726 aa12.26□□□□□ -0.45
LRRC28-214ENST00000559433 AARS2Q5JTZ9 985 aaKnown RBP12.26□□□□□ -0.45
LRRC28-214ENST00000559433 RASGRP3Q8IV61 690 aa12.26□□□□□ -0.45
LRRC28-214ENST00000559433 NLGN4XQ8N0W4 816 aa12.26□□□□□ -0.45
LRRC28-214ENST00000559433 NLGN4YQ8NFZ3 816 aaPredicted RBP12.26□□□□□ -0.45
LRRC28-214ENST00000559433 OR4E2Q8NGC2 313 aa12.26□□□□□ -0.45
LRRC28-214ENST00000559433 LCN9Q8WX39 176 aa12.26□□□□□ -0.45
LRRC28-214ENST00000559433 KLHL6Q8WZ60 621 aa12.26□□□□□ -0.45
LRRC28-214ENST00000559433 UBXN4Q92575 508 aa12.26□□□□□ -0.45
LRRC28-214ENST00000559433 SGSM3Q96HU1 749 aa12.26□□□□□ -0.45
LRRC28-214ENST00000559433 OR6C1Q96RD1 312 aa12.26□□□□□ -0.45
LRRC28-214ENST00000559433 OSBPL9Q96SU4 736 aa12.26□□□□□ -0.45
LRRC28-214ENST00000559433 CD180Q99467 661 aa12.26□□□□□ -0.45
LRRC28-214ENST00000559433 HGH1Q9BTY7 390 aa12.26□□□□□ -0.45
LRRC28-214ENST00000559433 SRMSQ9H3Y6 488 aa12.26□□□□□ -0.45
LRRC28-214ENST00000559433 SYBUQ9NX95 663 aa12.26□□□□□ -0.45
LRRC28-214ENST00000559433 ANAPC5Q9UJX4 755 aa12.26□□□□□ -0.45
LRRC28-214ENST00000559433 PILRAQ9UKJ1 303 aa12.26□□□□□ -0.45
LRRC28-214ENST00000559433 PCDHGA4Q9Y5G9 962 aa12.26□□□□□ -0.45
LRRC28-214ENST00000559433 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.25□□□□□ -0.45
LRRC28-214ENST00000559433 IGHV5-51A0A0C4DH38 117 aa12.25□□□□□ -0.45
LRRC28-214ENST00000559433 GOLGA6L10A0A0M3HER8 536 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms