RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 ATG9AQ7Z3C6 839 aa4.25□□□□□ -1.73
CASC4-206ENST00000558847 SFR1Q86XK3 245 aa4.25□□□□□ -1.73
CASC4-206ENST00000558847 KMT5CQ86Y97 462 aa4.25□□□□□ -1.73
CASC4-206ENST00000558847 ZNF595Q8IYB9 648 aa4.25□□□□□ -1.73
CASC4-206ENST00000558847 MUC20Q8N307 709 aaPredicted RBP4.25□□□□□ -1.73
CASC4-206ENST00000558847 ZNF611Q8N823 705 aa4.25□□□□□ -1.73
CASC4-206ENST00000558847 ZNF114Q8NC26 417 aa4.25□□□□□ -1.73
CASC4-206ENST00000558847 Q8NFD4 153 aa4.25□□□□□ -1.73
CASC4-206ENST00000558847 C9orf43Q8TAL5 461 aaPredicted RBP4.25□□□□□ -1.73
CASC4-206ENST00000558847 HMGCLL1Q8TB92 370 aa4.25□□□□□ -1.73
CASC4-206ENST00000558847 ABTB1Q969K4 478 aaPredicted RBP4.25□□□□□ -1.73
CASC4-206ENST00000558847 SPDL1Q96EA4 605 aa4.25□□□□□ -1.73
CASC4-206ENST00000558847 SCMH1Q96GD3 660 aa4.25□□□□□ -1.73
CASC4-206ENST00000558847 ABHD8Q96I13 439 aa4.25□□□□□ -1.73
CASC4-206ENST00000558847 ZNF558Q96NG5 402 aa4.25□□□□□ -1.73
CASC4-206ENST00000558847 SEMA6AQ9H2E6 1030 aa4.25□□□□□ -1.73
CASC4-206ENST00000558847 ZNF580Q9UK33 172 aa4.25□□□□□ -1.73
CASC4-206ENST00000558847 SNX7Q9UNH6 387 aa4.25□□□□□ -1.73
CASC4-206ENST00000558847 POMT1Q9Y6A1 747 aa4.25□□□□□ -1.73
CASC4-206ENST00000558847 ZFP37Q9Y6Q3 630 aaPredicted RBP4.25□□□□□ -1.73
CASC4-206ENST00000558847 TRAV34A0A0B4J273 112 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 ZCWPW2A0A1B0GU75 182 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 CLEC18AA5D8T8 446 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 PRR32B1ATL7 298 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 TMEM178BH3BS89 294 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 PSMD14O00487 310 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 WDR1O75083 606 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 PDE9AO76083 593 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 CAMTA2O94983 1202 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 PMS2P2O95744 297 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 PENKP01210 267 aaPredicted RBP4.24□□□□□ -1.73
CASC4-206ENST00000558847 ATP5BP06576 529 aaKnown RBP4.24□□□□□ -1.73
CASC4-206ENST00000558847 CDC25CP30307 473 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 SLC6A6P31641 620 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 AHRP35869 848 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 ACSM1Q08AH1 577 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 DLG1Q12959 904 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 GTF2H2Q13888 395 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 C6orf136Q5SQH8 315 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 SPOUT1Q5T280 376 aaKnown RBP4.24□□□□□ -1.73
CASC4-206ENST00000558847 PRR27Q6MZM9 219 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 GTF2H2CQ6P1K8 395 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 TRAT1Q6PIZ9 186 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 PACS1Q6VY07 963 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 PPP1R21Q6ZMI0 780 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 ZBTB49Q6ZSB9 765 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 CREB3L2Q70SY1 520 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 DNAJB7Q7Z6W7 309 aaPredicted RBP4.24□□□□□ -1.73
CASC4-206ENST00000558847 DCP1BQ8IZD4 617 aaKnown RBP4.24□□□□□ -1.73
CASC4-206ENST00000558847 GBGT1Q8N5D6 347 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 CLEC18CQ8NCF0 446 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 OR2AJ1Q8NGZ0 328 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 OR52I2Q8NH67 350 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 GDAP1Q8TB36 358 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 TMED6Q8WW62 240 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 FIG4Q92562 907 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 EXT2Q93063 718 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 MIB2Q96AX9 1013 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 SPSB1Q96BD6 273 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 MOB3AQ96BX8 217 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 BICD1Q96G01 975 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 BTBD10Q9BSF8 475 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 C16orf70Q9BSU1 422 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 TM6SF1Q9BZW5 370 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 DPAGT1Q9H3H5 408 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 ST6GALNAC4Q9H4F1 302 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 XAB2Q9HCS7 855 aaKnown RBP4.24□□□□□ -1.73
CASC4-206ENST00000558847 MIOSQ9NXC5 875 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 POU2F3Q9UKI9 436 aa4.24□□□□□ -1.73
CASC4-206ENST00000558847 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.24□□□□□ -1.738e-7■■■□□ 18.5
CASC4-206ENST00000558847 PRSS51A0A1B0GVH4 220 aa4.23□□□□□ -1.73
CASC4-206ENST00000558847 MAGEA13PA6NCF6 341 aa4.23□□□□□ -1.73
CASC4-206ENST00000558847 HEPACAM2A8MVW5 462 aa4.23□□□□□ -1.73
CASC4-206ENST00000558847 MEIS2O14770 477 aa4.23□□□□□ -1.73
CASC4-206ENST00000558847 EIF3DO15371 548 aaKnown RBP eCLIP4.23□□□□□ -1.73
CASC4-206ENST00000558847 SPRY1O43609 319 aaPredicted RBP4.23□□□□□ -1.73
CASC4-206ENST00000558847 MYL6BP14649 208 aa4.23□□□□□ -1.73
CASC4-206ENST00000558847 MYOD1P15172 320 aa4.23□□□□□ -1.73
CASC4-206ENST00000558847 CSF2RAP15509 400 aa4.23□□□□□ -1.73
CASC4-206ENST00000558847 GM2AP17900 193 aa4.23□□□□□ -1.73
CASC4-206ENST00000558847 CBLP22681 906 aa4.23□□□□□ -1.73
CASC4-206ENST00000558847 NAGLUP54802 743 aa4.23□□□□□ -1.73
CASC4-206ENST00000558847 EEF1A2Q05639 463 aaKnown RBP4.23□□□□□ -1.73
CASC4-206ENST00000558847 GAGE5Q13069 117 aa4.23□□□□□ -1.73
CASC4-206ENST00000558847 GAGE6Q13070 117 aa4.23□□□□□ -1.73
CASC4-206ENST00000558847 TRAF3Q13114 568 aa4.23□□□□□ -1.73
CASC4-206ENST00000558847 SNTA1Q13424 505 aa4.23□□□□□ -1.73
CASC4-206ENST00000558847 NFATC4Q14934 902 aa4.23□□□□□ -1.73
CASC4-206ENST00000558847 UGCGQ16739 394 aa4.23□□□□□ -1.73
CASC4-206ENST00000558847 SETMARQ53H47 684 aaPredicted RBP4.23□□□□□ -1.73
CASC4-206ENST00000558847 CAVIN1Q6NZI2 390 aaKnown RBP4.23□□□□□ -1.73
CASC4-206ENST00000558847 LINGO4Q6UY18 593 aa4.23□□□□□ -1.73
CASC4-206ENST00000558847 ASB18Q6ZVZ8 466 aa4.23□□□□□ -1.73
CASC4-206ENST00000558847 TMPRSS11FQ6ZWK6 438 aa4.23□□□□□ -1.73
CASC4-206ENST00000558847 SPATA21Q7Z572 469 aa4.23□□□□□ -1.73
CASC4-206ENST00000558847 PHLDB2Q86SQ0 1253 aa4.23□□□□□ -1.73
CASC4-206ENST00000558847 GPALPP1Q8IXQ4 340 aa4.23□□□□□ -1.73
CASC4-206ENST00000558847 C4orf19Q8IY42 314 aa4.23□□□□□ -1.73
CASC4-206ENST00000558847 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.23□□□□□ -1.73
CASC4-206ENST00000558847 CEP57L1Q8IYX8 460 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms