RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 CTSL3PQ5NE16 218 aa13.5□□□□□ -0.25
TSPAN3-205ENST00000558745 PROSER1Q86XN7 944 aa13.5□□□□□ -0.25
TSPAN3-205ENST00000558745 VRK3Q8IV63 474 aa13.5□□□□□ -0.25
TSPAN3-205ENST00000558745 LIN37Q96GY3 246 aaPredicted RBP13.5□□□□□ -0.25
TSPAN3-205ENST00000558745 PLAC1Q9HBJ0 212 aa13.5□□□□□ -0.25
TSPAN3-205ENST00000558745 C20orf96Q9NUD7 363 aaPredicted RBP13.5□□□□□ -0.25
TSPAN3-205ENST00000558745 OCIAD1Q9NX40 245 aa13.5□□□□□ -0.25
TSPAN3-205ENST00000558745 GALPQ9UBC7 116 aa13.5□□□□□ -0.25
TSPAN3-205ENST00000558745 PISDQ9UG56 409 aa13.5□□□□□ -0.25
TSPAN3-205ENST00000558745 CDC23Q9UJX2 597 aa13.5□□□□□ -0.25
TSPAN3-205ENST00000558745 CELSR3Q9NYQ7 3312 aa13.5□□□□□ -0.25
TSPAN3-205ENST00000558745 URB1O60287 2271 aaKnown RBP13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 SLC5A10A0PJK1 596 aa13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 BHMG1C9JSJ3 638 aaPredicted RBP13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 SEC31AO94979 1220 aaKnown RBP13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 S1PR4O95977 384 aa13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 FTH1P02794 183 aa13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 THRAP10827 490 aa13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 ELK3P41970 407 aa13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 TTPAP49638 278 aa13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 MAPK10P53779 464 aa13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 EPHA4P54764 986 aa13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 HSPA14Q0VDF9 509 aa13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 PRKG2Q13237 762 aa13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 KRT33BQ14525 404 aa13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 MORF4L2Q15014 288 aa13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 AARS2Q5JTZ9 985 aaKnown RBP13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 PTRHD1Q6GMV3 140 aaKnown RBP13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 SDCCAG8Q86SQ7 713 aaPredicted RBP13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 HOOK3Q86VS8 718 aa13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 ANKMY2Q8IV38 441 aa13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 OR4D9Q8NGE8 314 aa13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 LPGAT1Q92604 370 aa13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 PMEPA1Q969W9 287 aa13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 TRIM44Q96DX7 344 aaPredicted RBP13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 RNF31Q96EP0 1072 aa13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 SNF8Q96H20 258 aa13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 SLC46A1Q96NT5 459 aa13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 BIRC8Q96P09 236 aa13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 TGM7Q96PF1 710 aa13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 EBNA1BP2Q99848 306 aaKnown RBP13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 CARD6Q9BX69 1037 aa13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 STRADBQ9C0K7 418 aa13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 VPS37BQ9H9H4 285 aa13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 UCK1Q9HA47 277 aa13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 ASCL3Q9NQ33 180 aa13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 FBXO6Q9NRD1 293 aaPredicted RBP13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 IARS2Q9NSE4 1012 aaKnown RBP13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 CHMP2BQ9UQN3 213 aa13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 FAM169AQ9Y6X4 670 aa13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 NBEAQ8NFP9 2946 aa13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 DSPP15924 2871 aaKnown RBP13.49□□□□□ -0.25
TSPAN3-205ENST00000558745 ACACAQ13085 2346 aa13.48□□□□□ -0.25
TSPAN3-205ENST00000558745 TMX2-CTNND1H3BSU7 103 aa13.48□□□□□ -0.25
TSPAN3-205ENST00000558745 PLD2O14939 933 aa13.48□□□□□ -0.25
TSPAN3-205ENST00000558745 CAPN5O15484 640 aaPredicted RBP13.48□□□□□ -0.25
TSPAN3-205ENST00000558745 NIPSNAP2O75323 286 aa13.48□□□□□ -0.25
TSPAN3-205ENST00000558745 USP1O94782 785 aa13.48□□□□□ -0.25
TSPAN3-205ENST00000558745 ERVK-10P10266 1014 aa13.48□□□□□ -0.25
TSPAN3-205ENST00000558745 PAMP19021 973 aa13.48□□□□□ -0.25
TSPAN3-205ENST00000558745 PPARGP37231 505 aaPredicted RBP13.48□□□□□ -0.25
TSPAN3-205ENST00000558745 MPP1Q00013 466 aa13.48□□□□□ -0.25
TSPAN3-205ENST00000558745 ABRQ12979 859 aa13.48□□□□□ -0.25
TSPAN3-205ENST00000558745 THOC5Q13769 683 aaKnown RBP13.48□□□□□ -0.25
TSPAN3-205ENST00000558745 PLCL1Q15111 1095 aa13.48□□□□□ -0.25
TSPAN3-205ENST00000558745 TYSND1Q2T9J0 566 aa13.48□□□□□ -0.25
TSPAN3-205ENST00000558745 HSP90AA5PQ58FG0 334 aa13.48□□□□□ -0.25
TSPAN3-205ENST00000558745 MRNIPQ6NTE8 343 aa13.48□□□□□ -0.25
TSPAN3-205ENST00000558745 FBXO38Q6PIJ6 1188 aa13.48□□□□□ -0.25
TSPAN3-205ENST00000558745 FAM92BQ6ZTR7 304 aa13.48□□□□□ -0.25
TSPAN3-205ENST00000558745 CILP2Q8IUL8 1156 aa13.48□□□□□ -0.25
TSPAN3-205ENST00000558745 AVL9Q8NBF6 648 aa13.48□□□□□ -0.25
TSPAN3-205ENST00000558745 OR4E2Q8NGC2 313 aa13.48□□□□□ -0.25
TSPAN3-205ENST00000558745 OR5AR1Q8NGP9 310 aa13.48□□□□□ -0.25
TSPAN3-205ENST00000558745 TFGQ92734 400 aaPredicted RBP13.48□□□□□ -0.25
TSPAN3-205ENST00000558745 CFAP36Q96G28 342 aa13.48□□□□□ -0.25
TSPAN3-205ENST00000558745 NAF1Q96HR8 494 aaKnown RBP13.48□□□□□ -0.25
TSPAN3-205ENST00000558745 ERP44Q9BS26 406 aa13.48□□□□□ -0.25
TSPAN3-205ENST00000558745 XKR8Q9H6D3 395 aa13.48□□□□□ -0.25
TSPAN3-205ENST00000558745 SLC17A6Q9P2U8 582 aa13.48□□□□□ -0.25
TSPAN3-205ENST00000558745 CIDEBQ9UHD4 219 aa13.48□□□□□ -0.25
TSPAN3-205ENST00000558745 SLC24A2Q9UI40 661 aa13.48□□□□□ -0.25
TSPAN3-205ENST00000558745 TSR3Q9UJK0 312 aaKnown RBP13.48□□□□□ -0.25
TSPAN3-205ENST00000558745 CDYLQ9Y232 598 aa13.48□□□□□ -0.25
TSPAN3-205ENST00000558745 LAMA5O15230 3695 aa13.48□□□□□ -0.25
TSPAN3-205ENST00000558745 KLHL33A6NCF5 533 aa13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 OR6C74A6NCV1 312 aa13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 FAM187AA6NFU0 413 aa13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 QSOX1O00391 747 aa13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 IFRD1O00458 451 aaPredicted RBP13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 LIN7AO14910 233 aaPredicted RBP13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 HAUS5O94927 633 aa13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 JMJD7P0C870 316 aa13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 TPBGLP0DKB5 382 aa13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 FGF3P11487 239 aaPredicted RBP13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 PGAM1P18669 254 aa13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 RPS3P23396 243 aaKnown RBP eCLIP13.47□□□□□ -0.253e-7■■■□□ 18.1
TSPAN3-205ENST00000558745 AOAHP28039 575 aa13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 ACADLP28330 430 aa13.47□□□□□ -0.25
TSPAN3-205ENST00000558745 RBMS1P29558 406 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms